| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55981227
Identifier: 55981227
GI number: 55981227
Start: 1196819
End: 1197220
Strand: Direct
Name: 55981227
Synonym: TTHA1258
Alternate gene names: NA
Gene position: 1196819-1197220 (Clockwise)
Preceding gene: 55981226
Following gene: 55981228
Centisome position: 64.7
GC content: 72.64
Gene sequence:
>402_bases ATGAGCCCCGTGGAGGAAAGCCCGGAGGAGTTCCTGGCCCGCTTCGCCGCCCACCGGGTGGAGGTGAGGCTCTACCCCGA GCCCTGGGGGAGCCCCCTCCTCGAGGTCCAGACCCCGGCGGGGTTCGTCTACGCCATGGACCGGGGCGCGCCCCCGGCCC CGGTGGGGGAAGCGCGGGTCCTCTTCCACGGCCTCGCCAGAAAGGTCGCCCGGGCCCAGGGGAAGGAGGGCGTCTTCCGG GAGGGGGCGGCCTACCGCCTCGTGGGCACGGCGCGCCCTCTGGAAAAGGGGTTTTACCTCCTTTTGGCCCGGGGGCTTCC CGTGGTGGTCCACTGGGAAGGCCCCATGCCCGAGGAGGCCGAGGTCCTCCTCTGGCCCCCCCTGATGCTCTTCCGGGAGT GA
Upstream 100 bases:
>100_bases GCGTCCTCTCCCCCAAGTGCGGCAACGGCAACCAGTACCTGGACAAAAAGGCGGCCCTGGCCCTCGCCTTGGCCTTGGCC CACCCCTTAGACTGAGAAGC
Downstream 100 bases:
>100_bases GCGTGCGCTGCGCCTGCGGCCAGAAGAACCCCCCCGAGGCCCGGTACTGCCTGGCCTGCGGCCAGCTCCTCGGGGCGAAG CTTCCCCGGGAGACCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSPVEESPEEFLARFAAHRVEVRLYPEPWGSPLLEVQTPAGFVYAMDRGAPPAPVGEARVLFHGLARKVARAQGKEGVFR EGAAYRLVGTARPLEKGFYLLLARGLPVVVHWEGPMPEEAEVLLWPPLMLFRE
Sequences:
>Translated_133_residues MSPVEESPEEFLARFAAHRVEVRLYPEPWGSPLLEVQTPAGFVYAMDRGAPPAPVGEARVLFHGLARKVARAQGKEGVFR EGAAYRLVGTARPLEKGFYLLLARGLPVVVHWEGPMPEEAEVLLWPPLMLFRE >Mature_132_residues SPVEESPEEFLARFAAHRVEVRLYPEPWGSPLLEVQTPAGFVYAMDRGAPPAPVGEARVLFHGLARKVARAQGKEGVFRE GAAYRLVGTARPLEKGFYLLLARGLPVVVHWEGPMPEEAEVLLWPPLMLFRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14832; Mature: 14701
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPVEESPEEFLARFAAHRVEVRLYPEPWGSPLLEVQTPAGFVYAMDRGAPPAPVGEARV CCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHH LFHGLARKVARAQGKEGVFREGAAYRLVGTARPLEKGFYLLLARGLPVVVHWEGPMPEEA HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHEEEEECCCCEEEEECCCCCCCC EVLLWPPLMLFRE CEEEECCHHHHCC >Mature Secondary Structure SPVEESPEEFLARFAAHRVEVRLYPEPWGSPLLEVQTPAGFVYAMDRGAPPAPVGEARV CCCCCCHHHHHHHHHHHEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHH LFHGLARKVARAQGKEGVFREGAAYRLVGTARPLEKGFYLLLARGLPVVVHWEGPMPEEA HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHEEEEECCCCEEEEECCCCCCCC EVLLWPPLMLFRE CEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA