| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981228
Identifier: 55981228
GI number: 55981228
Start: 1197217
End: 1199832
Strand: Direct
Name: 55981228
Synonym: TTHA1259
Alternate gene names: NA
Gene position: 1197217-1199832 (Clockwise)
Preceding gene: 55981227
Following gene: 55981229
Centisome position: 64.72
GC content: 75.73
Gene sequence:
>2616_bases GTGAGCGTGCGCTGCGCCTGCGGCCAGAAGAACCCCCCCGAGGCCCGGTACTGCCTGGCCTGCGGCCAGCTCCTCGGGGC GAAGCTTCCCCGGGAGACCCGGTTCGTGAGCGTGGTCTTCTTTGACCTGGCGAACTCCACCGAGGCCTTCCGCCAGGGGC TTTCCCCGGCCTACCGGCGCCTAAGGGAGGCCCTCGAGGAGGCCGCAGGCCGGGCCCGGGCCCGGGGGGGGTTCGTCCAC CGCTTCCTGGGGGACGGGGTCCTGGTCTTCTTCGGGGCCCCGAGGAGCCAGGGCCTCGAGCCCTGGCGGGCCCTGGCCGC CGCCTGGGACATGGTCCGGCACTCCCCCTTCCCCGCCCGGGCCGGGGTGGCGAGCGGGGAGGCCCTCTGGGGGCCCTTGG GCAGCGGGTACGCCGGGGAGCCCACCCTCCTCGGCCCCCCGGTGAACCTGGCCGAGCGCCTCTCCAAGCTCGCCGCCCCC GGGGAGGTCCTCACCGAGGCCACCACCCTGCGCCTCGCCCCCGGGGCGGAGGGGGCGCTTCTGGGAAGCCGGGAGGTCAA GGGGATGGGCCAGGTGCCCGTCTACCGCCTGGTCCGGCTCGCCCTGGACCTCCCGCCCCACCGCAGGCCCCTCCTCCAGA CCCTGGAGGCGCGCCTTCTTACGGAAAGGCGCCTGGTGGTCCACGGGCCCGCGGGAAGCGGGAAGAGCTTCCTCCTCGAG GTCTTCCGCGAGAGGCGGGCCCGGGGCCTTCCCTTCCCCACGGTGCGGCTTCAGCGCATGGGGCCCGAGATGCCCCTCCG GGCCACCCTCTACCGGGCGGTGACCGAGGCCTTCGGCGCCCCGGAGGCCCTCCTCCGGAACCTCCCCGGGGACCTGGCTG AGGCCCTGGCCTACAGCCTCGGCCTCGCCCCCAGGCCCCCGTGGGAGAAGCGCGCGCTGGACGAGGCCATCCTCGCCGCC TGGCGGGAGGCCCTAATGGGGCTAAAGACGCCCCTTCTCCTCCTTCTCCAGGACCTCCACTACCCGGACCGCACCCTGGA GCGCTTCCTGGAGCGGATGCCGGAAAACCTCCTGGTGCTCGCGGAAAGCCGCAGGCCCCTCTTCCCCGCCCGCCTCGGGC TGGAGGGCCTCGAGGCCCCGCCCCTCCTCGCCCTCCAGCCCGCCCTAGACGCCCTCCCCGTCCCCGAGCGCACCGCCCTC CTCGCCATGGGGGTCCTGGGGGAGGTGCCCCCCGAGGTGGTGGAGGCCATCGCCGGGCCCTTCTCCCGGGAACGGCTCGT GGCGGAGGAACTTCTGGTCCACGGGCGCGTCCCGCCCCCCCTCGCCGAGGCCGCGCGGCGCCTCGTCCCCGAGGAGGAGC GAACCCAGTGGCACCGGCTCGCCGCCAGGCTTCTCGCCGCCCAAGGGCGCCTGGAGGAGGCCGCCCACCACCTGGCCGAG GCGGGCGAGGCCCGGGAGGCCGCCCACCTCCTCCGCGTCCAGGCCCAGGCCCTGTGGCGGGAGGGCCACCCCGACCGGGC CCTCCCCCTCTACCAAAAGGCGGAGGGGCTCGCCCCGCCCGGCTGGCGGGCCTCCTTGGCCGCGGAGGCCCAGGACGCCC TCGCCTCCCTGGGCCGGGCGGAAGAAGCGGCCTCGGGGCCGAGGCGGGAGGATGCTGCGCTTGCCCGCTACCGCGAGCTC CGCGCCCGCCCCGAGGCGGGGGCCCTCCTCGCCCTCCTCCCCGCCCTCAAGCCTTACCCCCTGGAGCAGGCCGAGGCCCG GCTCCTCCTCGCGGGCCTCCTCTGGCGGGCCTTCCGGCCCCAGGAGGCCCTGGCGGTCCTCGCCGAGCCCCCCCACCCCG GGCTTCCCCCGGACCCCGTCCTGGAGCACCGGAGCCTCAAGGCGGGCCTCCTCATGGACCTGGGGCGGCACGCGGAGGCC GAGCCCCTCCTCGAGGGCCCCCTCCCCGAGGGCCTCGAGGCCCGGGCCCGCTTCGGCGCCGCCCGCCTCCGCCTCCTCCT GGAAACGGGGAGGCTGGCCCAGGCCCTGGAGGAGGGGGAAGGGCTTTACGCCAAGACCCCCCACCCCTGGATGGCCGCCG CCCTCCTCGGCGCCTGGACCCTAAAGGACCGCTTCCCCGAGGCCCTCTTCCGGGAGGCCCTGGCCCACCCGGACGGCCGG GGCCTCGCCCTCCTGGCCCTGGCCCACCGCCGCTGGCGGCGGGGGGAGGACCCGGTGCCCCTCTTCAAGGAGGTCCTTAA GGAGGCCCGGCGCCTGCCCAATCCTTACCTCCACCACCTCGCCCTCTCCTCCCTGGCCCTCTACCTCTGGCCCAAAGCGC CGCGGAAGGTCCAGGCCCTCTCCCAGCACCTCCTCTACCACACCCACAAAACGGGCTTCCTCGTCCACCTGGAGGTGGCC CGCCTCCTCCGGGCCCAGCTCCTCCTGGAGACGGGGGAGCGGGTGGACCACCTTTTGGGCTTCGCCCCCTCCCTCCCCCT CACCCGCGCCTGGAAGGCCGCCCTCCAGGGCCAGGAAGCCGCCGAGGACCTGGAGGGGTACGGTATCCTGGGGAGGTGGG TCAGGAGGCTTTGGCGTAGGGGGGCGGCATGGACGCGGGCCAGGCGGTGGAGCTGA
Upstream 100 bases:
>100_bases TCCTTTTGGCCCGGGGGCTTCCCGTGGTGGTCCACTGGGAAGGCCCCATGCCCGAGGAGGCCGAGGTCCTCCTCTGGCCC CCCCTGATGCTCTTCCGGGA
Downstream 100 bases:
>100_bases TCAAGTCCCGCCTCTCCTTGCGGGAGGTGGTCTCCCGCTACGTGGCCCTGAAGCCGGCGGGCCGCGGCCGCTGGAAGGGC CTCTGCCCCTTCCACCAGGA
Product: adenylate cyclase-like protein
Products: NA
Alternate protein names: Adenylate Cyclase Related Protein; Adenylyl Cyclase Class-3/4/Guanylyl Cyclase
Number of amino acids: Translated: 871; Mature: 870
Protein sequence:
>871_residues MSVRCACGQKNPPEARYCLACGQLLGAKLPRETRFVSVVFFDLANSTEAFRQGLSPAYRRLREALEEAAGRARARGGFVH RFLGDGVLVFFGAPRSQGLEPWRALAAAWDMVRHSPFPARAGVASGEALWGPLGSGYAGEPTLLGPPVNLAERLSKLAAP GEVLTEATTLRLAPGAEGALLGSREVKGMGQVPVYRLVRLALDLPPHRRPLLQTLEARLLTERRLVVHGPAGSGKSFLLE VFRERRARGLPFPTVRLQRMGPEMPLRATLYRAVTEAFGAPEALLRNLPGDLAEALAYSLGLAPRPPWEKRALDEAILAA WREALMGLKTPLLLLLQDLHYPDRTLERFLERMPENLLVLAESRRPLFPARLGLEGLEAPPLLALQPALDALPVPERTAL LAMGVLGEVPPEVVEAIAGPFSRERLVAEELLVHGRVPPPLAEAARRLVPEEERTQWHRLAARLLAAQGRLEEAAHHLAE AGEAREAAHLLRVQAQALWREGHPDRALPLYQKAEGLAPPGWRASLAAEAQDALASLGRAEEAASGPRREDAALARYREL RARPEAGALLALLPALKPYPLEQAEARLLLAGLLWRAFRPQEALAVLAEPPHPGLPPDPVLEHRSLKAGLLMDLGRHAEA EPLLEGPLPEGLEARARFGAARLRLLLETGRLAQALEEGEGLYAKTPHPWMAAALLGAWTLKDRFPEALFREALAHPDGR GLALLALAHRRWRRGEDPVPLFKEVLKEARRLPNPYLHHLALSSLALYLWPKAPRKVQALSQHLLYHTHKTGFLVHLEVA RLLRAQLLLETGERVDHLLGFAPSLPLTRAWKAALQGQEAAEDLEGYGILGRWVRRLWRRGAAWTRARRWS
Sequences:
>Translated_871_residues MSVRCACGQKNPPEARYCLACGQLLGAKLPRETRFVSVVFFDLANSTEAFRQGLSPAYRRLREALEEAAGRARARGGFVH RFLGDGVLVFFGAPRSQGLEPWRALAAAWDMVRHSPFPARAGVASGEALWGPLGSGYAGEPTLLGPPVNLAERLSKLAAP GEVLTEATTLRLAPGAEGALLGSREVKGMGQVPVYRLVRLALDLPPHRRPLLQTLEARLLTERRLVVHGPAGSGKSFLLE VFRERRARGLPFPTVRLQRMGPEMPLRATLYRAVTEAFGAPEALLRNLPGDLAEALAYSLGLAPRPPWEKRALDEAILAA WREALMGLKTPLLLLLQDLHYPDRTLERFLERMPENLLVLAESRRPLFPARLGLEGLEAPPLLALQPALDALPVPERTAL LAMGVLGEVPPEVVEAIAGPFSRERLVAEELLVHGRVPPPLAEAARRLVPEEERTQWHRLAARLLAAQGRLEEAAHHLAE AGEAREAAHLLRVQAQALWREGHPDRALPLYQKAEGLAPPGWRASLAAEAQDALASLGRAEEAASGPRREDAALARYREL RARPEAGALLALLPALKPYPLEQAEARLLLAGLLWRAFRPQEALAVLAEPPHPGLPPDPVLEHRSLKAGLLMDLGRHAEA EPLLEGPLPEGLEARARFGAARLRLLLETGRLAQALEEGEGLYAKTPHPWMAAALLGAWTLKDRFPEALFREALAHPDGR GLALLALAHRRWRRGEDPVPLFKEVLKEARRLPNPYLHHLALSSLALYLWPKAPRKVQALSQHLLYHTHKTGFLVHLEVA RLLRAQLLLETGERVDHLLGFAPSLPLTRAWKAALQGQEAAEDLEGYGILGRWVRRLWRRGAAWTRARRWS >Mature_870_residues SVRCACGQKNPPEARYCLACGQLLGAKLPRETRFVSVVFFDLANSTEAFRQGLSPAYRRLREALEEAAGRARARGGFVHR FLGDGVLVFFGAPRSQGLEPWRALAAAWDMVRHSPFPARAGVASGEALWGPLGSGYAGEPTLLGPPVNLAERLSKLAAPG EVLTEATTLRLAPGAEGALLGSREVKGMGQVPVYRLVRLALDLPPHRRPLLQTLEARLLTERRLVVHGPAGSGKSFLLEV FRERRARGLPFPTVRLQRMGPEMPLRATLYRAVTEAFGAPEALLRNLPGDLAEALAYSLGLAPRPPWEKRALDEAILAAW REALMGLKTPLLLLLQDLHYPDRTLERFLERMPENLLVLAESRRPLFPARLGLEGLEAPPLLALQPALDALPVPERTALL AMGVLGEVPPEVVEAIAGPFSRERLVAEELLVHGRVPPPLAEAARRLVPEEERTQWHRLAARLLAAQGRLEEAAHHLAEA GEAREAAHLLRVQAQALWREGHPDRALPLYQKAEGLAPPGWRASLAAEAQDALASLGRAEEAASGPRREDAALARYRELR ARPEAGALLALLPALKPYPLEQAEARLLLAGLLWRAFRPQEALAVLAEPPHPGLPPDPVLEHRSLKAGLLMDLGRHAEAE PLLEGPLPEGLEARARFGAARLRLLLETGRLAQALEEGEGLYAKTPHPWMAAALLGAWTLKDRFPEALFREALAHPDGRG LALLALAHRRWRRGEDPVPLFKEVLKEARRLPNPYLHHLALSSLALYLWPKAPRKVQALSQHLLYHTHKTGFLVHLEVAR LLRAQLLLETGERVDHLLGFAPSLPLTRAWKAALQGQEAAEDLEGYGILGRWVRRLWRRGAAWTRARRWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95975; Mature: 95844
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRCACGQKNPPEARYCLACGQLLGAKLPRETRFVSVVFFDLANSTEAFRQGLSPAYRR CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEEHHHHCCHHHHHHCCCHHHHH LREALEEAAGRARARGGFVHRFLGDGVLVFFGAPRSQGLEPWRALAAAWDMVRHSPFPAR HHHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC AGVASGEALWGPLGSGYAGEPTLLGPPVNLAERLSKLAAPGEVLTEATTLRLAPGAEGAL CCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCE LGSREVKGMGQVPVYRLVRLALDLPPHRRPLLQTLEARLLTERRLVVHGPAGSGKSFLLE ECCHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHH VFRERRARGLPFPTVRLQRMGPEMPLRATLYRAVTEAFGAPEALLRNLPGDLAEALAYSL HHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHH GLAPRPPWEKRALDEAILAAWREALMGLKTPLLLLLQDLHYPDRTLERFLERMPENLLVL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCHHEEEE AESRRPLFPARLGLEGLEAPPLLALQPALDALPVPERTALLAMGVLGEVPPEVVEAIAGP ECCCCCCCHHHHCCCCCCCCCCEEECCHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCC FSRERLVAEELLVHGRVPPPLAEAARRLVPEEERTQWHRLAARLLAAQGRLEEAAHHLAE CHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH AGEAREAAHLLRVQAQALWREGHPDRALPLYQKAEGLAPPGWRASLAAEAQDALASLGRA HCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCH EEAASGPRREDAALARYRELRARPEAGALLALLPALKPYPLEQAEARLLLAGLLWRAFRP HHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC QEALAVLAEPPHPGLPPDPVLEHRSLKAGLLMDLGRHAEAEPLLEGPLPEGLEARARFGA HHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH ARLRLLLETGRLAQALEEGEGLYAKTPHPWMAAALLGAWTLKDRFPEALFREALAHPDGR HHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GLALLALAHRRWRRGEDPVPLFKEVLKEARRLPNPYLHHLALSSLALYLWPKAPRKVQAL CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHH SQHLLYHTHKTGFLVHLEVARLLRAQLLLETGERVDHLLGFAPSLPLTRAWKAALQGQEA HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH AEDLEGYGILGRWVRRLWRRGAAWTRARRWS HHHHHCCCHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure SVRCACGQKNPPEARYCLACGQLLGAKLPRETRFVSVVFFDLANSTEAFRQGLSPAYRR CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEEHHHHCCHHHHHHCCCHHHHH LREALEEAAGRARARGGFVHRFLGDGVLVFFGAPRSQGLEPWRALAAAWDMVRHSPFPAR HHHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC AGVASGEALWGPLGSGYAGEPTLLGPPVNLAERLSKLAAPGEVLTEATTLRLAPGAEGAL CCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCE LGSREVKGMGQVPVYRLVRLALDLPPHRRPLLQTLEARLLTERRLVVHGPAGSGKSFLLE ECCHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHH VFRERRARGLPFPTVRLQRMGPEMPLRATLYRAVTEAFGAPEALLRNLPGDLAEALAYSL HHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHH GLAPRPPWEKRALDEAILAAWREALMGLKTPLLLLLQDLHYPDRTLERFLERMPENLLVL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCHHEEEE AESRRPLFPARLGLEGLEAPPLLALQPALDALPVPERTALLAMGVLGEVPPEVVEAIAGP ECCCCCCCHHHHCCCCCCCCCCEEECCHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCC FSRERLVAEELLVHGRVPPPLAEAARRLVPEEERTQWHRLAARLLAAQGRLEEAAHHLAE CHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH AGEAREAAHLLRVQAQALWREGHPDRALPLYQKAEGLAPPGWRASLAAEAQDALASLGRA HCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCH EEAASGPRREDAALARYRELRARPEAGALLALLPALKPYPLEQAEARLLLAGLLWRAFRP HHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC QEALAVLAEPPHPGLPPDPVLEHRSLKAGLLMDLGRHAEAEPLLEGPLPEGLEARARFGA HHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH ARLRLLLETGRLAQALEEGEGLYAKTPHPWMAAALLGAWTLKDRFPEALFREALAHPDGR HHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GLALLALAHRRWRRGEDPVPLFKEVLKEARRLPNPYLHHLALSSLALYLWPKAPRKVQAL CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHH SQHLLYHTHKTGFLVHLEVARLLRAQLLLETGERVDHLLGFAPSLPLTRAWKAALQGQEA HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH AEDLEGYGILGRWVRRLWRRGAAWTRARRWS HHHHHCCCHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA