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The map label for this gene is 55980920

Identifier: 55980920

GI number: 55980920

Start: 896437

End: 897279

Strand: Reverse

Name: 55980920

Synonym: TTHA0951

Alternate gene names: NA

Gene position: 897279-896437 (Counterclockwise)

Preceding gene: 55980925

Following gene: 55980919

Centisome position: 48.51

GC content: 69.4

Gene sequence:

>843_bases
ATGCGCATTACCCTTGTAACCGACTCCACCTCCGACCTGCCCCAGGACCTAAGGGGGCGCCTCGGCGTCCGCGTGGTGCC
CCTCTACGTGAACCTGAGCGGGGCCATTTACCGGGACTGGGAGGAGATCACCCCCACCGAGATCTTCCAGAAGGTCCGGG
AGGGCGCGGCCTTCCCCACCACGAGCCAGCCCTCCCCCGAGGACTTCGCCCGGGTATACCGGGAGGCCCTGGAGGAGGCC
GACCACGTCCTCTCCCTCCACATCTCCGGGAAGCTTTCGGGGACGGTGCAGTCGGCGGAGCTGGCCGCCCAGGAGTTCCC
GGGGCGGGTCACGGTGGTGGACACCCAGGCCGCCTCCCTGGGCGTGGGCATGATGGTCCTCAGGGCCAAGGAGCTCCTGG
AGGAAGGCCAAAGCCTGGAGGCGGTCCTCGCCGAGCTTGAGCGCCTCCGCCGGGACCACTTCGTCCGCTTCAGCGTGGCC
ACCCTGGAGTTTCTGAAGCGGGGCGGACGCATCGGCGGAGCCCAGGCCTTCCTCGGAACCCTCCTCAACCTGAAGCCCGT
TCTCACCCTGAAGGAGGGCCGGGTGGAGGCCGCAGGCCGCGCCCGGGGGGAAAAAAAGGCCCGGGAGGAGATCCTCAAGG
CCTTCCGGGCCTGGGCGGAGGGCCGGAAGCGGATCCGGGCCTACTTCCTCTACAGCGGGGACGAGGACGCGGTGGCGGCG
CTCCGCCAAGAGGTCCTGGCCTCCGGCCTGCCCGTGGAAGAGGCCCTGGTGAACGAGCTCGGCGCGGTGATCGCGAGCCA
CACGGGACCGGGAACCTATGGCTTCTACGCCTACAGCCTCTAG

Upstream 100 bases:

>100_bases
AGGACCCTCCACATAGGGCCAAAAGTAGCACCAAGCGGGGCCCAGGGCAACTTCCCCCCTACACTACACCCGTGGTATCC
TCTCTCGCGAAGGTGCGGCC

Downstream 100 bases:

>100_bases
CGTGGCCTTCGTGGCCGACTCCACCCTCGGCCTCTCCCCCGAGGAGGCCAAAAGCCTGGGGATCCACGTGGTGCCCCAGC
AGGTGCTCCACCGGGGGCGC

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPTTSQPSPEDFARVYREALEEA
DHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASLGVGMMVLRAKELLEEGQSLEAVLAELERLRRDHFVRFSVA
TLEFLKRGGRIGGAQAFLGTLLNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDEDAVAA
LRQEVLASGLPVEEALVNELGAVIASHTGPGTYGFYAYSL

Sequences:

>Translated_280_residues
MRITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPTTSQPSPEDFARVYREALEEA
DHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASLGVGMMVLRAKELLEEGQSLEAVLAELERLRRDHFVRFSVA
TLEFLKRGGRIGGAQAFLGTLLNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDEDAVAA
LRQEVLASGLPVEEALVNELGAVIASHTGPGTYGFYAYSL
>Mature_280_residues
MRITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPTTSQPSPEDFARVYREALEEA
DHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASLGVGMMVLRAKELLEEGQSLEAVLAELERLRRDHFVRFSVA
TLEFLKRGGRIGGAQAFLGTLLNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDEDAVAA
LRQEVLASGLPVEEALVNELGAVIASHTGPGTYGFYAYSL

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30716; Mature: 30716

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPT
CEEEEEECCCCCCCHHHHHCCCCEEEEEEEECCCCEECCHHHCCHHHHHHHHHCCCCCCC
TSQPSPEDFARVYREALEEADHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASL
CCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCHHHH
GVGMMVLRAKELLEEGQSLEAVLAELERLRRDHFVRFSVATLEFLKRGGRIGGAQAFLGT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LLNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDEDAVAA
HHCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHH
LRQEVLASGLPVEEALVNELGAVIASHTGPGTYGFYAYSL
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECC
>Mature Secondary Structure
MRITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPT
CEEEEEECCCCCCCHHHHHCCCCEEEEEEEECCCCEECCHHHCCHHHHHHHHHCCCCCCC
TSQPSPEDFARVYREALEEADHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASL
CCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCHHHH
GVGMMVLRAKELLEEGQSLEAVLAELERLRRDHFVRFSVATLEFLKRGGRIGGAQAFLGT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LLNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDEDAVAA
HHCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHH
LRQEVLASGLPVEEALVNELGAVIASHTGPGTYGFYAYSL
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]