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The map label for this gene is 55980919

Identifier: 55980919

GI number: 55980919

Start: 895611

End: 896435

Strand: Reverse

Name: 55980919

Synonym: TTHA0950

Alternate gene names: NA

Gene position: 896435-895611 (Counterclockwise)

Preceding gene: 55980920

Following gene: 55980918

Centisome position: 48.46

GC content: 72.12

Gene sequence:

>825_bases
GTGGCCTTCGTGGCCGACTCCACCCTCGGCCTCTCCCCCGAGGAGGCCAAAAGCCTGGGGATCCACGTGGTGCCCCAGCA
GGTGCTCCACCGGGGGCGCTCCTTCCGCGACCTGGTGGAGATCGCCCCCGGGGAGGTCCTTCGCCTTCTTTGCAGCGGGG
AGAGGCTCACCACGAGCCAGGTGGCCCCGGAGGACCTGAGGAAGCTTTACGAGGCGTTGCTCAGGACCCACGGGCGCGTG
GTCTCCGTCCACGTCTCGGGCCTCCTCTCCGGGACGGTGGACACCGCGAAAAAGGTGGCCCAGGCTTTCGGGGACCGGGT
CAAGGTCCTGGACTCCTGGTCCCTAAGCGGCGGCCTCCTCCTGGTGCTGGAAAGGGCGCGGCGGCTTCTGGAAGAGGGGG
TGGCCTGGGAGCACCTGGAGGAGGCCCTCGCCCCTTACCGCGAGCGGGTCCGGGGGTACGTCCTTCCCGCGACGCTGGAC
TACCTCCACCGCTCCGGGAGGATCGGCGGGCTGCGGCGCTTCGTAGGGGGCCTCCTCCGGATCCTTCCCGTCCTCGAGGT
CCGGGAGGGCCGGGTCCATCCGGGGCCCCGGGTCCGGGGCTTCGCCGAGGGGATACGCAAGGTGGCGGCCCTCTTCCGCC
GGGACTTTCCGAAAGAGGCCCGGGTCTACCTGGCCCACGCGGAAAACCCCGAGGGGGCCAAGGCCCTGGGCGAGGCCCTG
AAGGCCGAGGGGGTTGAGGTCCTGGGGGTCCTCCCCGCCGGAGCGGCGGTGAGCGTGCACACGGGGCCCGGCACGGTGGC
GGCCTTCGCCGGGCCCAGGAGGTGA

Upstream 100 bases:

>100_bases
GGCCTGCCCGTGGAAGAGGCCCTGGTGAACGAGCTCGGCGCGGTGATCGCGAGCCACACGGGACCGGGAACCTATGGCTT
CTACGCCTACAGCCTCTAGC

Downstream 100 bases:

>100_bases
GGCGTGCGGGCGGTGGTGCAGCGGGTCTCCGAGGCCTTCGTGGAGGTGGAGGGCGAGGTGGTGGGGAGGATCGGGCTGGG
CCTCCTCGTCCTCCTCGGGG

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MAFVADSTLGLSPEEAKSLGIHVVPQQVLHRGRSFRDLVEIAPGEVLRLLCSGERLTTSQVAPEDLRKLYEALLRTHGRV
VSVHVSGLLSGTVDTAKKVAQAFGDRVKVLDSWSLSGGLLLVLERARRLLEEGVAWEHLEEALAPYRERVRGYVLPATLD
YLHRSGRIGGLRRFVGGLLRILPVLEVREGRVHPGPRVRGFAEGIRKVAALFRRDFPKEARVYLAHAENPEGAKALGEAL
KAEGVEVLGVLPAGAAVSVHTGPGTVAAFAGPRR

Sequences:

>Translated_274_residues
MAFVADSTLGLSPEEAKSLGIHVVPQQVLHRGRSFRDLVEIAPGEVLRLLCSGERLTTSQVAPEDLRKLYEALLRTHGRV
VSVHVSGLLSGTVDTAKKVAQAFGDRVKVLDSWSLSGGLLLVLERARRLLEEGVAWEHLEEALAPYRERVRGYVLPATLD
YLHRSGRIGGLRRFVGGLLRILPVLEVREGRVHPGPRVRGFAEGIRKVAALFRRDFPKEARVYLAHAENPEGAKALGEAL
KAEGVEVLGVLPAGAAVSVHTGPGTVAAFAGPRR
>Mature_273_residues
AFVADSTLGLSPEEAKSLGIHVVPQQVLHRGRSFRDLVEIAPGEVLRLLCSGERLTTSQVAPEDLRKLYEALLRTHGRVV
SVHVSGLLSGTVDTAKKVAQAFGDRVKVLDSWSLSGGLLLVLERARRLLEEGVAWEHLEEALAPYRERVRGYVLPATLDY
LHRSGRIGGLRRFVGGLLRILPVLEVREGRVHPGPRVRGFAEGIRKVAALFRRDFPKEARVYLAHAENPEGAKALGEALK
AEGVEVLGVLPAGAAVSVHTGPGTVAAFAGPRR

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 29693; Mature: 29562

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFVADSTLGLSPEEAKSLGIHVVPQQVLHRGRSFRDLVEIAPGEVLRLLCSGERLTTSQ
CCEECCCCCCCCHHHHHHCCEEECCHHHHHCCCCHHHHHHHCHHHHHHHHHCCCCCCCCC
VAPEDLRKLYEALLRTHGRVVSVHVSGLLSGTVDTAKKVAQAFGDRVKVLDSWSLSGGLL
CCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCHHEEHHHCCCCCCHHH
LVLERARRLLEEGVAWEHLEEALAPYRERVRGYVLPATLDYLHRSGRIGGLRRFVGGLLR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECHHHHHHHHHCCCCCHHHHHHHHHHH
ILPVLEVREGRVHPGPRVRGFAEGIRKVAALFRRDFPKEARVYLAHAENPEGAKALGEAL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHH
KAEGVEVLGVLPAGAAVSVHTGPGTVAAFAGPRR
HHCCCEEEEEECCCCEEEEECCCCCEEECCCCCC
>Mature Secondary Structure 
AFVADSTLGLSPEEAKSLGIHVVPQQVLHRGRSFRDLVEIAPGEVLRLLCSGERLTTSQ
CEECCCCCCCCHHHHHHCCEEECCHHHHHCCCCHHHHHHHCHHHHHHHHHCCCCCCCCC
VAPEDLRKLYEALLRTHGRVVSVHVSGLLSGTVDTAKKVAQAFGDRVKVLDSWSLSGGLL
CCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCHHEEHHHCCCCCCHHH
LVLERARRLLEEGVAWEHLEEALAPYRERVRGYVLPATLDYLHRSGRIGGLRRFVGGLLR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECHHHHHHHHHCCCCCHHHHHHHHHHH
ILPVLEVREGRVHPGPRVRGFAEGIRKVAALFRRDFPKEARVYLAHAENPEGAKALGEAL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHH
KAEGVEVLGVLPAGAAVSVHTGPGTVAAFAGPRR
HHCCCEEEEEECCCCEEEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]