Click here to switch to the map view.

The map label for this gene is 55980925

Identifier: 55980925

GI number: 55980925

Start: 901554

End: 903050

Strand: Reverse

Name: 55980925

Synonym: TTHA0956

Alternate gene names: NA

Gene position: 903050-901554 (Counterclockwise)

Preceding gene: 55980937

Following gene: 55980920

Centisome position: 48.82

GC content: 72.14

Gene sequence:

>1497_bases
ATGCGGGGGCGGGCCGCCGGGGGCAACCGGCGGCTTAGACAAAAACGCGGAAGAGTTTGTCTTTTCGCACAAAACCTCCC
GCCCCCGCATCCCTTAGGGGCCGTGGTATCGTGGAAAACAACAATGAAAGAGGGAAACTTTGTTCCCAAAGACACCTCCT
TTGACGCCCTGGTGGGGGGGCTGGGCCTCGAGGTCCTCCGCCCTTCCCCCCGGCCCGTCCTCTACCTCCTCCCGGCGCCC
AGGCCTCTCCTCTCCCCCGAAGGGGCCCTCCTCCTCTTCCGGCCCCAGGAGGGGCTTTACCGCTACCGCAACGCCGCGGG
CTTCCTCCTCCCGGAGCCGGACCCCGAGCTTTTGGCCTTCGCCGAGCGGGAGGGCCTGGGCTTCGCCCTCTACCCCCCCT
GGCTCAAGCGGGAAAGCCTGGAGCGGGCCCTCGCCCTCCGCCTCTTCGCCCTGGCCCCCGGGATGGCCCTGGCGGGGTTA
CTGGACCTCTTCCTGAAGCTCCCTGAACGCGCCCTTCTGGAGGTCCTGCACCAGGCCACGGGGCTCGCCCTGGCCCACGT
GGCCCCCTGGGGGGAGGTCCTGGGCTTCGCCGGGCCCGTCCCCGCCCGGCACCCCAAGGAGCCGGGGACGGGGCGGGGCT
GGGCGGCCCTCGAGGCGGGGGAGGGCCTCCTCGTGGCCTACGGGGAGGAGGAAGACCTCCTCCGGGCCTGGGGGCTTTTG
GAGGTGGCGGCGCGGCTCTTAAGGCTCCGCGCCCGGGAGCGGAGCGTGGAGCGCATGCAGGAGGAGACCCTGGGGGGGGC
CCTATTGGAAGGGCTCATCCTGGGCGAGGCCGACCCGGAAAGGCTCTTCGCCTTCGGCTTCGTGGAGGGGGTGGAGTGGG
TCCTCGCCCTGGTGGAGCCGCCCGCCGTCTTGGGGCGGCACCGCCTGGCGGAAGAGCGGAGGCGGGAGGCCACCCTGGAG
CTCCGCCGCCGCGTTGGGGCCTACCTGGACCGGCTCGGCGTCCCCTACCTCCTCACGGCCCGGGGAAACCGGGTGGCCGC
CATGTGGCAGGTGCACAACCCGAGGCGGGAGGCGGAGCGCCTCCTTCAGGCCCTTCCCCCAGGAAGCCGCCTGGGCTACT
CGGCGGTGCACGCCGGCGGCGAGGTCCAGGAGGCCTACCGCGAGGCCCTCATCGCCCTCAAGGCCGCCCGTCCCGGCGAG
GCCCTCTCCTTCGCGGGCCTTGACCCCGTGGCCTTCGTCCTCCTGCAGCAATCCCCTGAGGACCTCAAGGCCCTGGTGGA
GCGCTTCCTCCCCCTCCCCCCTAAGCTTCTCCGCACCCTGGAGGTCTACATGGAAAGCGCCACCCTGGAGGAGGCGGCCC
GTGCCCTCCACGTCCACCCCAACACCCTCCGCTACCGCCTGAAGCGGGTGGAGGAGCGGATCGGCCCCTTGAGCGCCCCC
GAGACCCTGGCCCGGGTCCACCTGGCCCTCAGGGCCCGCTCCCTCCTCGCCGGCTGA

Upstream 100 bases:

>100_bases
GGCGCCTTAGGGCCTCCTCGTCCAACCGGCCGCGCCGAAAGGGTGTGGGTAGGGGCGGTATGGAACCGCGGAACATGCTG
GGCTCCTTTCGCCTCCCAGG

Downstream 100 bases:

>100_bases
GCCGGGGGAGGAGGTAGCGCTCCACCGCGTAGCGGAACCCCTCGGGGCCCGGCGCCGGCGTGGCCAGGACCCCCTCCGGG
GGGTCCCTCCGGCCCACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MRGRAAGGNRRLRQKRGRVCLFAQNLPPPHPLGAVVSWKTTMKEGNFVPKDTSFDALVGGLGLEVLRPSPRPVLYLLPAP
RPLLSPEGALLLFRPQEGLYRYRNAAGFLLPEPDPELLAFAEREGLGFALYPPWLKRESLERALALRLFALAPGMALAGL
LDLFLKLPERALLEVLHQATGLALAHVAPWGEVLGFAGPVPARHPKEPGTGRGWAALEAGEGLLVAYGEEEDLLRAWGLL
EVAARLLRLRARERSVERMQEETLGGALLEGLILGEADPERLFAFGFVEGVEWVLALVEPPAVLGRHRLAEERRREATLE
LRRRVGAYLDRLGVPYLLTARGNRVAAMWQVHNPRREAERLLQALPPGSRLGYSAVHAGGEVQEAYREALIALKAARPGE
ALSFAGLDPVAFVLLQQSPEDLKALVERFLPLPPKLLRTLEVYMESATLEEAARALHVHPNTLRYRLKRVEERIGPLSAP
ETLARVHLALRARSLLAG

Sequences:

>Translated_498_residues
MRGRAAGGNRRLRQKRGRVCLFAQNLPPPHPLGAVVSWKTTMKEGNFVPKDTSFDALVGGLGLEVLRPSPRPVLYLLPAP
RPLLSPEGALLLFRPQEGLYRYRNAAGFLLPEPDPELLAFAEREGLGFALYPPWLKRESLERALALRLFALAPGMALAGL
LDLFLKLPERALLEVLHQATGLALAHVAPWGEVLGFAGPVPARHPKEPGTGRGWAALEAGEGLLVAYGEEEDLLRAWGLL
EVAARLLRLRARERSVERMQEETLGGALLEGLILGEADPERLFAFGFVEGVEWVLALVEPPAVLGRHRLAEERRREATLE
LRRRVGAYLDRLGVPYLLTARGNRVAAMWQVHNPRREAERLLQALPPGSRLGYSAVHAGGEVQEAYREALIALKAARPGE
ALSFAGLDPVAFVLLQQSPEDLKALVERFLPLPPKLLRTLEVYMESATLEEAARALHVHPNTLRYRLKRVEERIGPLSAP
ETLARVHLALRARSLLAG
>Mature_498_residues
MRGRAAGGNRRLRQKRGRVCLFAQNLPPPHPLGAVVSWKTTMKEGNFVPKDTSFDALVGGLGLEVLRPSPRPVLYLLPAP
RPLLSPEGALLLFRPQEGLYRYRNAAGFLLPEPDPELLAFAEREGLGFALYPPWLKRESLERALALRLFALAPGMALAGL
LDLFLKLPERALLEVLHQATGLALAHVAPWGEVLGFAGPVPARHPKEPGTGRGWAALEAGEGLLVAYGEEEDLLRAWGLL
EVAARLLRLRARERSVERMQEETLGGALLEGLILGEADPERLFAFGFVEGVEWVLALVEPPAVLGRHRLAEERRREATLE
LRRRVGAYLDRLGVPYLLTARGNRVAAMWQVHNPRREAERLLQALPPGSRLGYSAVHAGGEVQEAYREALIALKAARPGE
ALSFAGLDPVAFVLLQQSPEDLKALVERFLPLPPKLLRTLEVYMESATLEEAARALHVHPNTLRYRLKRVEERIGPLSAP
ETLARVHLALRARSLLAG

Specific function: Unknown

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54911; Mature: 54911

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGRAAGGNRRLRQKRGRVCLFAQNLPPPHPLGAVVSWKTTMKEGNFVPKDTSFDALVGG
CCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHH
LGLEVLRPSPRPVLYLLPAPRPLLSPEGALLLFRPQEGLYRYRNAAGFLLPEPDPELLAF
CCHHHCCCCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHEE
AEREGLGFALYPPWLKRESLERALALRLFALAPGMALAGLLDLFLKLPERALLEVLHQAT
HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
GLALAHVAPWGEVLGFAGPVPARHPKEPGTGRGWAALEAGEGLLVAYGEEEDLLRAWGLL
CCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHH
EVAARLLRLRARERSVERMQEETLGGALLEGLILGEADPERLFAFGFVEGVEWVLALVEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PAVLGRHRLAEERRREATLELRRRVGAYLDRLGVPYLLTARGNRVAAMWQVHNPRREAER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCHHHHHH
LLQALPPGSRLGYSAVHAGGEVQEAYREALIALKAARPGEALSFAGLDPVAFVLLQQSPE
HHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCH
DLKALVERFLPLPPKLLRTLEVYMESATLEEAARALHVHPNTLRYRLKRVEERIGPLSAP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCH
ETLARVHLALRARSLLAG
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGRAAGGNRRLRQKRGRVCLFAQNLPPPHPLGAVVSWKTTMKEGNFVPKDTSFDALVGG
CCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHH
LGLEVLRPSPRPVLYLLPAPRPLLSPEGALLLFRPQEGLYRYRNAAGFLLPEPDPELLAF
CCHHHCCCCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHEE
AEREGLGFALYPPWLKRESLERALALRLFALAPGMALAGLLDLFLKLPERALLEVLHQAT
HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
GLALAHVAPWGEVLGFAGPVPARHPKEPGTGRGWAALEAGEGLLVAYGEEEDLLRAWGLL
CCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHH
EVAARLLRLRARERSVERMQEETLGGALLEGLILGEADPERLFAFGFVEGVEWVLALVEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PAVLGRHRLAEERRREATLELRRRVGAYLDRLGVPYLLTARGNRVAAMWQVHNPRREAER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCHHHHHH
LLQALPPGSRLGYSAVHAGGEVQEAYREALIALKAARPGEALSFAGLDPVAFVLLQQSPE
HHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCH
DLKALVERFLPLPPKLLRTLEVYMESATLEEAARALHVHPNTLRYRLKRVEERIGPLSAP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCH
ETLARVHLALRARSLLAG
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA