| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980665
Identifier: 55980665
GI number: 55980665
Start: 657678
End: 659786
Strand: Direct
Name: 55980665
Synonym: TTHA0696
Alternate gene names: NA
Gene position: 657678-659786 (Clockwise)
Preceding gene: 55980661
Following gene: 55980672
Centisome position: 35.56
GC content: 74.44
Gene sequence:
>2109_bases GTGGCCAGGGCGCGGGCGAGCTCCAGACGCTTGTCCTCGAGGAGGGTGAGCTCCGAGGCCAAGGCCCTGGCTCCGGAGCT CCCCGCCTTTGAGGTGGAAAGGGCGCTAAGCCTCGTCCGGGGCTGGCCCTTGGGGCTGAGGCTCGTCCTCCTCGCCATGC GCAAGGGCCTGAGGCCCGAGCTCGCCCTGGAGAGCGCCGAGGGGCTTCTCGCCTACCTGGGGCAGGCCCTGCCCAAGGAG GTCCTGGACCGGGCCTCCCGGCTCGCCCTCCTCGGGGAGGTGGACGAGGAGGAAGGGGCCTTCCTCCTCCCTTACGCCGA GGACCTGCTTCTGGAAAGGCGGGAGGGGCGCATCTGCTTCCACCCCCTGGTGCGGAGCGCCCTCAAGGCCCTCCTTCCCG AAGGGGAGGCCCGGGGCCTCCTCGCCCGGGCGGCGGAGGCGGCCTTGGCCCGGGGCGAGGGGGTGCGGGCCGCGGAGTTC CTCCTGGAGGCCGGGCGCTTCGGCCACGCCGCCGACCTCCTCCTCAAGGAGGGGGAGGGCTGGCTGGCGCGGGGGCTCAC CTACACCGTGCTCCGCCTCCTCGGCCACCTGCCGGAGGGGGTGCGCCGGGGGCGGGCGGGGCTTCGCCTCCTCGAGGCCG AGGCCCTGCGCCAGGCGGGGCGGTACCGGGAGGCGGAGGCCCTCTACCGGGAGGCCCTCGAGGCGGGGGAGGAGCGGGCC TACCTCGGCCTCGTCCGCCTCTTCCTGGACACGGTGGAGCCCGCCCGGGCCAAGCCCTTCCTGGAGGAGGCCCTCCGCCG CTTCCCCGGCCTGGCCCGCCCCCTCTTGGCGGAGAACCTCCTCAACGAGGGCCGGGCGGGGGAGGCGGAGGCCTTGGGCT TCTCGGGGCCGAGGCTTTTCCTCCGCCAGGGGAGGCCTGCGGAGGCCTTAGAGCTTCTCAAGCGGGCGGAGGACCCCGGC CTACACCGCCCGCCCCAGAACCACCGGGAGGGAAGCCTCCTCCGGGCCCTTTTGGAGTGCGTGGCCGGGGACGCGGAGGA GGGGCTTCGCTTTGCGGAGCGGGGCCGGTTTGAGGCGGAGGCCCTGGGGAGCCCCTTCGGCCTGAGCCTGGCGGAGGCCC GCAAGGGGCACGCCCTCCTCGCCTTGGGCCGTCTGCGGGAGGCGGAGGCCAGTTACCGCGCCGCCCTCGCCCTGAGCGAA GGGGGCCCGGCCCGCCTGGGGGTGGAGGCCTTGGGGGGACTTGCCGCCTTGGGCGACGACGGGGCCTACCGGGAGATGGT CCGGCTCTCCCGGGCCTCGGGGGACCTCTGGGTGGAAGGGTTCCTCACCCTGGTGGTGGCCCTAGCCCGGCTCCGCCTTG GGGAGGAGTTCCCCTTGGGCGCCTTCCCCGCCCCCGACCCCTTCCTCGAGGCCCTGGCCCGGGCCTACCCCTTCCGGGAC GGGTGGGAGGAGGTGCTTGAGCGCTACCCCTTCCTTGCGGGGAGGACCCTCTTCGCCCCGCCCCTCGCCCGGCTCCGGCG GGCCCTTTGGCGGCTCAGGCGCCTTCCCGTGCCCTACCACCCGGGGGTGCGGGTGGAGGTCCGGGCCCTGGGCGGGTTTG AGGTGCGGGTGGAGGGCAGGCCCGTCCGCTTCCGGCGGGAGAAGGCGCGGCTCCTCCTCGCCCTCCTCACCGTGAGGGAC TGGGAGAAGGAGGACCTTCTGGAGGCCCTGGAGGCCACCCCGGGGGAGTTTAGGGTCCTCTGGTGGGAGGTGGTGAACGC CCTGGAGCCCGAAAGGCCCAAAGGGGCCCCTCCCTACTTCCTCCGGACCCGGCCCTACGGGCTGAACCTCGAGGCGCCCG AGCTCTACCTGGACCTCCGCGACCCCGCCCTTCCTCCCCTTTCCCCCTACCGGGGGCTGGACCACCCCGTCCTGGACGAG GCCGCCCGGGCCTACCTGGAGGAGAGGCGGCGGGGCCTCCTGCAAAGCCCTCGCCCCGAGGACTGGCTTTTGGCCCTGCG GCTGGACCCCCTGGACGAGGCGGCTTTGGGCCGCCTCCGGGGGACGGCGCTCTACGAAAAAGGGCTCCGCCTCCGCCTTG TGGCGGAGGCGGAGCTGGAAGGGGACTAG
Upstream 100 bases:
>100_bases CCCGCTATTTCGGATCCTCCGGATCATCTCCACCGCCTCCTGGGCCTCCTTGGGCCGAAGCCCCGCCATGACCTCGTCCA AAAGGAGGACCTTGGGCCTC
Downstream 100 bases:
>100_bases GCCTTGCTGGCCTCTTGGGCCTTCCTGCGGTTTTTCCAGGCCACCACCAAGGCGCTCACCACGTAGATGGAGCTGTAGGT TCCCACGAAGATGCCCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 702; Mature: 701
Protein sequence:
>702_residues MARARASSRRLSSRRVSSEAKALAPELPAFEVERALSLVRGWPLGLRLVLLAMRKGLRPELALESAEGLLAYLGQALPKE VLDRASRLALLGEVDEEEGAFLLPYAEDLLLERREGRICFHPLVRSALKALLPEGEARGLLARAAEAALARGEGVRAAEF LLEAGRFGHAADLLLKEGEGWLARGLTYTVLRLLGHLPEGVRRGRAGLRLLEAEALRQAGRYREAEALYREALEAGEERA YLGLVRLFLDTVEPARAKPFLEEALRRFPGLARPLLAENLLNEGRAGEAEALGFSGPRLFLRQGRPAEALELLKRAEDPG LHRPPQNHREGSLLRALLECVAGDAEEGLRFAERGRFEAEALGSPFGLSLAEARKGHALLALGRLREAEASYRAALALSE GGPARLGVEALGGLAALGDDGAYREMVRLSRASGDLWVEGFLTLVVALARLRLGEEFPLGAFPAPDPFLEALARAYPFRD GWEEVLERYPFLAGRTLFAPPLARLRRALWRLRRLPVPYHPGVRVEVRALGGFEVRVEGRPVRFRREKARLLLALLTVRD WEKEDLLEALEATPGEFRVLWWEVVNALEPERPKGAPPYFLRTRPYGLNLEAPELYLDLRDPALPPLSPYRGLDHPVLDE AARAYLEERRRGLLQSPRPEDWLLALRLDPLDEAALGRLRGTALYEKGLRLRLVAEAELEGD
Sequences:
>Translated_702_residues MARARASSRRLSSRRVSSEAKALAPELPAFEVERALSLVRGWPLGLRLVLLAMRKGLRPELALESAEGLLAYLGQALPKE VLDRASRLALLGEVDEEEGAFLLPYAEDLLLERREGRICFHPLVRSALKALLPEGEARGLLARAAEAALARGEGVRAAEF LLEAGRFGHAADLLLKEGEGWLARGLTYTVLRLLGHLPEGVRRGRAGLRLLEAEALRQAGRYREAEALYREALEAGEERA YLGLVRLFLDTVEPARAKPFLEEALRRFPGLARPLLAENLLNEGRAGEAEALGFSGPRLFLRQGRPAEALELLKRAEDPG LHRPPQNHREGSLLRALLECVAGDAEEGLRFAERGRFEAEALGSPFGLSLAEARKGHALLALGRLREAEASYRAALALSE GGPARLGVEALGGLAALGDDGAYREMVRLSRASGDLWVEGFLTLVVALARLRLGEEFPLGAFPAPDPFLEALARAYPFRD GWEEVLERYPFLAGRTLFAPPLARLRRALWRLRRLPVPYHPGVRVEVRALGGFEVRVEGRPVRFRREKARLLLALLTVRD WEKEDLLEALEATPGEFRVLWWEVVNALEPERPKGAPPYFLRTRPYGLNLEAPELYLDLRDPALPPLSPYRGLDHPVLDE AARAYLEERRRGLLQSPRPEDWLLALRLDPLDEAALGRLRGTALYEKGLRLRLVAEAELEGD >Mature_701_residues ARARASSRRLSSRRVSSEAKALAPELPAFEVERALSLVRGWPLGLRLVLLAMRKGLRPELALESAEGLLAYLGQALPKEV LDRASRLALLGEVDEEEGAFLLPYAEDLLLERREGRICFHPLVRSALKALLPEGEARGLLARAAEAALARGEGVRAAEFL LEAGRFGHAADLLLKEGEGWLARGLTYTVLRLLGHLPEGVRRGRAGLRLLEAEALRQAGRYREAEALYREALEAGEERAY LGLVRLFLDTVEPARAKPFLEEALRRFPGLARPLLAENLLNEGRAGEAEALGFSGPRLFLRQGRPAEALELLKRAEDPGL HRPPQNHREGSLLRALLECVAGDAEEGLRFAERGRFEAEALGSPFGLSLAEARKGHALLALGRLREAEASYRAALALSEG GPARLGVEALGGLAALGDDGAYREMVRLSRASGDLWVEGFLTLVVALARLRLGEEFPLGAFPAPDPFLEALARAYPFRDG WEEVLERYPFLAGRTLFAPPLARLRRALWRLRRLPVPYHPGVRVEVRALGGFEVRVEGRPVRFRREKARLLLALLTVRDW EKEDLLEALEATPGEFRVLWWEVVNALEPERPKGAPPYFLRTRPYGLNLEAPELYLDLRDPALPPLSPYRGLDHPVLDEA ARAYLEERRRGLLQSPRPEDWLLALRLDPLDEAALGRLRGTALYEKGLRLRLVAEAELEGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77938; Mature: 77807
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARARASSRRLSSRRVSSEAKALAPELPAFEVERALSLVRGWPLGLRLVLLAMRKGLRPE CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHH LALESAEGLLAYLGQALPKEVLDRASRLALLGEVDEEEGAFLLPYAEDLLLERREGRICF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHCCCEEH HPLVRSALKALLPEGEARGLLARAAEAALARGEGVRAAEFLLEAGRFGHAADLLLKEGEG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCC WLARGLTYTVLRLLGHLPEGVRRGRAGLRLLEAEALRQAGRYREAEALYREALEAGEERA HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHH YLGLVRLFLDTVEPARAKPFLEEALRRFPGLARPLLAENLLNEGRAGEAEALGFSGPRLF HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH LRQGRPAEALELLKRAEDPGLHRPPQNHREGSLLRALLECVAGDAEEGLRFAERGRFEAE HCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH ALGSPFGLSLAEARKGHALLALGRLREAEASYRAALALSEGGPARLGVEALGGLAALGDD HCCCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHCCHHHCCCC GAYREMVRLSRASGDLWVEGFLTLVVALARLRLGEEFPLGAFPAPDPFLEALARAYPFRD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC GWEEVLERYPFLAGRTLFAPPLARLRRALWRLRRLPVPYHPGVRVEVRALGGFEVRVEGR CHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEECCC PVRFRREKARLLLALLTVRDWEKEDLLEALEATPGEFRVLWWEVVNALEPERPKGAPPYF CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCE LRTRPYGLNLEAPELYLDLRDPALPPLSPYRGLDHPVLDEAARAYLEERRRGLLQSPRPE EECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC DWLLALRLDPLDEAALGRLRGTALYEKGLRLRLVAEAELEGD CEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC >Mature Secondary Structure ARARASSRRLSSRRVSSEAKALAPELPAFEVERALSLVRGWPLGLRLVLLAMRKGLRPE CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHH LALESAEGLLAYLGQALPKEVLDRASRLALLGEVDEEEGAFLLPYAEDLLLERREGRICF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHCCCEEH HPLVRSALKALLPEGEARGLLARAAEAALARGEGVRAAEFLLEAGRFGHAADLLLKEGEG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCC WLARGLTYTVLRLLGHLPEGVRRGRAGLRLLEAEALRQAGRYREAEALYREALEAGEERA HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHH YLGLVRLFLDTVEPARAKPFLEEALRRFPGLARPLLAENLLNEGRAGEAEALGFSGPRLF HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH LRQGRPAEALELLKRAEDPGLHRPPQNHREGSLLRALLECVAGDAEEGLRFAERGRFEAE HCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH ALGSPFGLSLAEARKGHALLALGRLREAEASYRAALALSEGGPARLGVEALGGLAALGDD HCCCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHCCHHHCCCC GAYREMVRLSRASGDLWVEGFLTLVVALARLRLGEEFPLGAFPAPDPFLEALARAYPFRD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC GWEEVLERYPFLAGRTLFAPPLARLRRALWRLRRLPVPYHPGVRVEVRALGGFEVRVEGR CHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEECCC PVRFRREKARLLLALLTVRDWEKEDLLEALEATPGEFRVLWWEVVNALEPERPKGAPPYF CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCE LRTRPYGLNLEAPELYLDLRDPALPPLSPYRGLDHPVLDEAARAYLEERRRGLLQSPRPE EECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC DWLLALRLDPLDEAALGRLRGTALYEKGLRLRLVAEAELEGD CEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA