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The map label for this gene is yliI [C]

Identifier: 55980539

GI number: 55980539

Start: 538094

End: 539152

Strand: Direct

Name: yliI [C]

Synonym: TTHA0570

Alternate gene names: 55980539

Gene position: 538094-539152 (Clockwise)

Preceding gene: 55980538

Following gene: 55980541

Centisome position: 29.09

GC content: 71.58

Gene sequence:

>1059_bases
GTGGACCGGAGGCGCTTTCTCGTGGGGCTCCTCGGCCTGGGACTCGCCCGGGGGCAGGGGCTACGGGTGGAGGAGGTGGT
GGGGGGCCTCGAGGTCCCCTGGGCCTTGGCTTTCCTGCCGGACGGGGGGATGCTCATCGCGGAGAGGCCCGGGAGGATCC
GGCTCTTTAGGGAGGGCAGGCTTTCCACCTACGCCGAGCTTTCCGTCTACCACCGGGGGGAGTCTGGGCTTTTGGGCCTC
GCCCTCCACCCAAGGTTTCCCCAAGAGCCCTACGTCTACGCCTACCGCACCGTGGCGGAAGGGGGCCTGAGGAACCAGGT
GGTGCGCCTGAGGCACCTGGGGGAAAGGGGGGTCTTGGACCGGGTGGTCCTGGACGGGATCCCCGCCCGGCCCCACGGCC
TCCACTCGGGGGGGCGCATCGCCTTCGGCCCCGACGGGATGCTCTACGTGACCACGGGGGAGGTCTACGAGCGGGAGCTC
GCCCAGGACCTCGCCTCCTTGGGGGGGAAGATCCTCCGCCTCACCCCGGAAGGGGAGCCCGCCCCGGGAAACCCCTTCCT
GGGGCGAAGGGGGGCGAGGCCCGAGGTGTATAGCCTGGGCCACCGCAACCCCCAGGGCCTCGCCTGGCACCCAAAGACCG
GGGAGCTTTTCTCCAGCGAGCACGGGCCGAGCGGGGAGCAGGGCTATGGCCACGACGAGGTGAACCTGATCGTCCCCGGG
GGGAACTACGGCTGGCCGAGGGTGGTGGGGCGGGGGAACGACCCCCGGTACCGGGACCCCCTCTACTTCTGGCCCCAGGG
CTTCCCCCCGGGGAACCTCGCCTTCTTCCGGGGGGACCTCTACGTGGCGGGCCTCCGGGGGCAGGCCCTCTTGAGGCTCG
TCCTGGAGGGGGAGAGGGGCCGCTGGCGGGTTTTGCGGGTGGAGACCGCCCTTTCCGGCTTCGGCCGCCTTAGGGAGGTG
CAGGTGGGCCCCGATGGGGCCCTTTACGTCACCACCTCCAACCGGGACGGGAGGGGCCAGGTGCGCCCCGGGGACGACCG
GGTGCTACGCCTCCTTTAG

Upstream 100 bases:

>100_bases
GGCCTTCGGCCTTCTGGCCTCGGGCCAGGCGGTGAAGGTGATCCTGGACCCGAAGGCCTAAAGGGGGTTTCCGGTACCCT
GTCGGGGAAGGGGGTGGCTG

Downstream 100 bases:

>100_bases
GGGAAGGGCCGTGGCCGGCCTCTTGCGGAAGCGGACCTCCAAGACCCCGTTCCGCAGGGTGGCCTGGGCCGTCCCCTCCT
CAATGGGCCCGGGGAGGTCC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MDRRRFLVGLLGLGLARGQGLRVEEVVGGLEVPWALAFLPDGGMLIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGL
ALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYEREL
AQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPG
GNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREV
QVGPDGALYVTTSNRDGRGQVRPGDDRVLRLL

Sequences:

>Translated_352_residues
MDRRRFLVGLLGLGLARGQGLRVEEVVGGLEVPWALAFLPDGGMLIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGL
ALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYEREL
AQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPG
GNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREV
QVGPDGALYVTTSNRDGRGQVRPGDDRVLRLL
>Mature_352_residues
MDRRRFLVGLLGLGLARGQGLRVEEVVGGLEVPWALAFLPDGGMLIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGL
ALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYEREL
AQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPG
GNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREV
QVGPDGALYVTTSNRDGRGQVRPGDDRVLRLL

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936953, Length=277, Percent_Identity=31.7689530685921, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI187936955, Length=277, Percent_Identity=32.129963898917, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI124248546, Length=290, Percent_Identity=28.6206896551724, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1787060, Length=367, Percent_Identity=34.0599455040872, Blast_Score=168, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 38826; Mature: 38826

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRRFLVGLLGLGLARGQGLRVEEVVGGLEVPWALAFLPDGGMLIAERPGRIRLFREGR
CCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCEEEECCCCEEEEEECCC
LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLD
CCEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCHHH
RVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEP
HHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCC
APGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPG
CCCCCCCCCCCCCCCCEECCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCCEEEEECC
GNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERG
CCCCCCEEEECCCCCCCCCCEEECCCCCCCCCEEEEECCEEEEECCHHHEEEEEEECCCC
RWRVLRVETALSGFGRLREVQVGPDGALYVTTSNRDGRGQVRPGDDRVLRLL
CEEEEEEEEHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHEEEC
>Mature Secondary Structure
MDRRRFLVGLLGLGLARGQGLRVEEVVGGLEVPWALAFLPDGGMLIAERPGRIRLFREGR
CCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCEEEECCCCEEEEEECCC
LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLD
CCEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCHHH
RVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEP
HHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCC
APGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPG
CCCCCCCCCCCCCCCCEECCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCCEEEEECC
GNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERG
CCCCCCEEEECCCCCCCCCCEEECCCCCCCCCEEEEECCEEEEECCHHHEEEEEEECCCC
RWRVLRVETALSGFGRLREVQVGPDGALYVTTSNRDGRGQVRPGDDRVLRLL
CEEEEEEEEHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]