| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980174
Identifier: 55980174
GI number: 55980174
Start: 202129
End: 203025
Strand: Reverse
Name: 55980174
Synonym: TTHA0205
Alternate gene names: NA
Gene position: 203025-202129 (Counterclockwise)
Preceding gene: 55980180
Following gene: 55980173
Centisome position: 10.98
GC content: 71.24
Gene sequence:
>897_bases ATGCGCACCATGCGCCCCCCGGGGTGGAAGATCGCCGCCGTCCTTCTCGTGGGCATCCTGGCCATAAGCTTCGGGAGCAT CCTGGTGCGCCTGGCCCTTCGGGCCTCCGGGGACCAAAGCCTCGCCTTCAGCCTGGTGATGAGCGCGGGGCGCCTGGCCT TGGCCGCCCTCCTCCTCGCCCCCGGCTGGACGCGGCCCTTGGAGGGCAGGGCGGGGCTGCCCTTCGCCTTGGCCGCCGGG GGGTTTCTCGCCCTCCACTTCGCCTTCTGGATCACCTCCCTCTCCTACACCTCCGTGGCGGCGAGCACCGCCCTCGTCAC CACCAACCCCGTGTGGGTCACCCTTTTGGGCTGGTGGCTTTTCGGGGAGCGGCCTTCTTTCCTCACCCTGCTCGGCGTGG GCGTGGCCCTCCTCGGGGGGGTCCTCATCGGCCTGGGGGACAGCGAGGGCGGAGGGGGGGCCAACCCCCTCCTCGGGGAC TTCCTCGCCCTCCTCGGGGCGGTGGCGGCCTCTTGCTACTTCCTCCTCGGGCGGGAGGCCCAAAGGCGGGGGCTTTCCAC CTGGGCCTACGTCCGCGTGGCCTACACCGCGGCGGCCCTTCTCCTGCTTCCCCTGCCCTACCTCTTCGGCGGGGGGTACG GGGGGTATCCCCTCGAGGTCTACGCCTACCTCCTCCTCATGGCCCTCCTTCCCCAGCTCGTGGGCCACACCAGCTTCAAC TGGGCCACCCGCCACATCCCCCCGGTCCTCGTCACCCTGGCCATTCTCTTTGAGCCCGTGGGGGCGAGCCTCCTCGCCTA CTTCCTCTTCGGGGAGCTCCCCGGAAGCCGGGTCCTCCTCGGGGCCCTGATCCTCCTCGTGGGCGTGGCGCTGGCCGTGG TGGGGGGTAGGCGGTGA
Upstream 100 bases:
>100_bases TCGGGGGAAGTATACCAGCGCGGGGTGGGGCGTCCGTCCCCGGGTTTTCCCTTGGGCTACACTACTTTGACGCTTCCCGG AAGGCTTCCCTTGTGTAAAA
Downstream 100 bases:
>100_bases TCCCCGTGGCCCTCGCCGCCCTGCTTTGGGGGCTTGGGGGGGCTTTGGCGGGGCGCTTCATGCGGGAGATCCCCCCGGAG GTCCTCATCCCCTTGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MRTMRPPGWKIAAVLLVGILAISFGSILVRLALRASGDQSLAFSLVMSAGRLALAALLLAPGWTRPLEGRAGLPFALAAG GFLALHFAFWITSLSYTSVAASTALVTTNPVWVTLLGWWLFGERPSFLTLLGVGVALLGGVLIGLGDSEGGGGANPLLGD FLALLGAVAASCYFLLGREAQRRGLSTWAYVRVAYTAAALLLLPLPYLFGGGYGGYPLEVYAYLLLMALLPQLVGHTSFN WATRHIPPVLVTLAILFEPVGASLLAYFLFGELPGSRVLLGALILLVGVALAVVGGRR
Sequences:
>Translated_298_residues MRTMRPPGWKIAAVLLVGILAISFGSILVRLALRASGDQSLAFSLVMSAGRLALAALLLAPGWTRPLEGRAGLPFALAAG GFLALHFAFWITSLSYTSVAASTALVTTNPVWVTLLGWWLFGERPSFLTLLGVGVALLGGVLIGLGDSEGGGGANPLLGD FLALLGAVAASCYFLLGREAQRRGLSTWAYVRVAYTAAALLLLPLPYLFGGGYGGYPLEVYAYLLLMALLPQLVGHTSFN WATRHIPPVLVTLAILFEPVGASLLAYFLFGELPGSRVLLGALILLVGVALAVVGGRR >Mature_298_residues MRTMRPPGWKIAAVLLVGILAISFGSILVRLALRASGDQSLAFSLVMSAGRLALAALLLAPGWTRPLEGRAGLPFALAAG GFLALHFAFWITSLSYTSVAASTALVTTNPVWVTLLGWWLFGERPSFLTLLGVGVALLGGVLIGLGDSEGGGGANPLLGD FLALLGAVAASCYFLLGREAQRRGLSTWAYVRVAYTAAALLLLPLPYLFGGGYGGYPLEVYAYLLLMALLPQLVGHTSFN WATRHIPPVLVTLAILFEPVGASLLAYFLFGELPGSRVLLGALILLVGVALAVVGGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31219; Mature: 31219
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTMRPPGWKIAAVLLVGILAISFGSILVRLALRASGDQSLAFSLVMSAGRLALAALLLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC PGWTRPLEGRAGLPFALAAGGFLALHFAFWITSLSYTSVAASTALVTTNPVWVTLLGWWL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHH FGERPSFLTLLGVGVALLGGVLIGLGDSEGGGGANPLLGDFLALLGAVAASCYFLLGREA HCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH QRRGLSTWAYVRVAYTAAALLLLPLPYLFGGGYGGYPLEVYAYLLLMALLPQLVGHTSFN HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC WATRHIPPVLVTLAILFEPVGASLLAYFLFGELPGSRVLLGALILLVGVALAVVGGRR CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTMRPPGWKIAAVLLVGILAISFGSILVRLALRASGDQSLAFSLVMSAGRLALAALLLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC PGWTRPLEGRAGLPFALAAGGFLALHFAFWITSLSYTSVAASTALVTTNPVWVTLLGWWL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHH FGERPSFLTLLGVGVALLGGVLIGLGDSEGGGGANPLLGDFLALLGAVAASCYFLLGREA HCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH QRRGLSTWAYVRVAYTAAALLLLPLPYLFGGGYGGYPLEVYAYLLLMALLPQLVGHTSFN HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC WATRHIPPVLVTLAILFEPVGASLLAYFLFGELPGSRVLLGALILLVGVALAVVGGRR CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA