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The map label for this gene is scpA [H]

Identifier: 54294520

GI number: 54294520

Start: 1771194

End: 1771985

Strand: Reverse

Name: scpA [H]

Synonym: lpl1596

Alternate gene names: 54294520

Gene position: 1771985-1771194 (Counterclockwise)

Preceding gene: 54294521

Following gene: 54294519

Centisome position: 52.96

GC content: 38.38

Gene sequence:

>792_bases
ATGAATATCGATTTGCAGCCTGCGCCTATAGTCAAAGCAGTGGTGGATGGTAAGGAAATTACTCAGTTTCCAGAGGATTT
ATATATTCCTCCTGATGCATTGGAGGTATTACTGGATTCTTTTACCGGGCCATTAGACTTATTGCTGTATTTAATCCGCA
AGCAAAATATTGATATTCTTGATATTCCCATGACAAGTATAACCAACCAGTATTTACAATATATCCAGCTCATGGAAAAT
CGAAGAATGGAGCTGGCTGCCGAGTATTTATTAATGGCTGCCATGTTAGCTGAAATCAAGTCACGTTTATTATTGCCGGT
TACACCAGATTCAGAGGAGGAGGAAGAAGATCCACGCATGACTCTGGTAAGACAGTTGCAAGCTTATGAGCAAATAAAAC
AAGCGGCTGAATTATTGGATGGATTGCCAAGACAAGACAGAGATAATTTTACAATTCAGGTTAATCCAGATGAGGTTGAA
ACAATTAAAGTTTATCCTGAAGTTGAGTTATCTGAATTAGTCGAGGCTATGAAAGTTCTGCTGAAACGTGAAGAGCATTA
TTCCAAACATCAAGTTTCCAGGGAGTTAATGTCTGTTCGTGAACGAATGAGTCGTATTCTCTTTCAATTGCAGCATCAAA
AAATTTTGGAATTTAGCCAATTATATACTCTTGAAGAGGGAAGGATGGGATTGGTTGTGAGTTTTTTAGCTATTCTTGAA
CTGGCTAAGCAGTCTTTATTGATCATTACGCAAACTCAGCCATTTTCACCTATACATTTGCAGGCTGCATGA

Upstream 100 bases:

>100_bases
GTTCGGTAAAACGTATTGTAGCGGAAGGAAGCGAAGCGGCCAGAGAAGAAGGAAACAAGACTTTAAATACGGTCAGAGAA
GTCATGGGGCTTGATTATTA

Downstream 100 bases:

>100_bases
GATGATTGACAATGAATTAAAAAATATTGTTGAAGCTTTGGTATTATCCAGTAATGAGCCCGTTACTTTAGAAAAAATAC
AAGAAACTTTTGATGAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNIDLQPAPIVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDILDIPMTSITNQYLQYIQLMEN
RRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRMTLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVNPDEVE
TIKVYPEVELSELVEAMKVLLKREEHYSKHQVSRELMSVRERMSRILFQLQHQKILEFSQLYTLEEGRMGLVVSFLAILE
LAKQSLLIITQTQPFSPIHLQAA

Sequences:

>Translated_263_residues
MNIDLQPAPIVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDILDIPMTSITNQYLQYIQLMEN
RRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRMTLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVNPDEVE
TIKVYPEVELSELVEAMKVLLKREEHYSKHQVSRELMSVRERMSRILFQLQHQKILEFSQLYTLEEGRMGLVVSFLAILE
LAKQSLLIITQTQPFSPIHLQAA
>Mature_263_residues
MNIDLQPAPIVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDILDIPMTSITNQYLQYIQLMEN
RRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRMTLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVNPDEVE
TIKVYPEVELSELVEAMKVLLKREEHYSKHQVSRELMSVRERMSRILFQLQHQKILEFSQLYTLEEGRMGLVVSFLAILE
LAKQSLLIITQTQPFSPIHLQAA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30433; Mature: 30433

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDLQPAPIVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDIL
CCCCCCCCHHHHHHHCCHHHHHCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE
DIPMTSITNQYLQYIQLMENRRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHH
TLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVNPDEVETIKVYPEVELSELVEAMKVL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHH
LKREEHYSKHQVSRELMSVRERMSRILFQLQHQKILEFSQLYTLEEGRMGLVVSFLAILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LAKQSLLIITQTQPFSPIHLQAA
HHHCCEEEEECCCCCCCEEEECC
>Mature Secondary Structure
MNIDLQPAPIVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDIL
CCCCCCCCHHHHHHHCCHHHHHCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE
DIPMTSITNQYLQYIQLMENRRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHH
TLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVNPDEVETIKVYPEVELSELVEAMKVL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHH
LKREEHYSKHQVSRELMSVRERMSRILFQLQHQKILEFSQLYTLEEGRMGLVVSFLAILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LAKQSLLIITQTQPFSPIHLQAA
HHHCCEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]