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The map label for this gene is nudL [H]

Identifier: 54294401

GI number: 54294401

Start: 1639858

End: 1640433

Strand: Direct

Name: nudL [H]

Synonym: lpl1470

Alternate gene names: 54294401

Gene position: 1639858-1640433 (Clockwise)

Preceding gene: 54294400

Following gene: 54294402

Centisome position: 49.01

GC content: 34.03

Gene sequence:

>576_bases
TTGACTCCGATTGGGAAGATGAATATCGTGAATGTTTCACAAAAATTACTGCAGTTATCAATGGAATCAAATAATACCCA
ACAGTCAATCAAAACACATTCATCAGTTATCGTTTTACATGATCTTTCCAAAGACTCGTTAATTCTTACCAGGCGAAGTC
AGATGCTTAAAAAGCATCCAGGAGAAGTGTGCTTTCCTGGTGGTTTTCAAGAAATAAATGATCAAGATCTATATAGCACT
GCATTGAGAGAACTTAATGAAGAGTTAGGTGTTACATCAGAGAGAATAACTCTGATCAGAAAATTAAGCATTGAAAAGAC
TTTAATGGGTTTAGTCATTCACCCTTGGTACGCCAGTATTGACTCTATATTTCCTTACACTATGAATCCACAAGAGGTTA
GTGAATTAATTCTTGTGCCTATGCCTTTAGTAAAAAATCAGAAAAATTATAAAGAAATTAGAATTGAGAAAGAGGGAAAA
CATATTGTCACCTGCCAATTTATTGCTAATGAAGAATTAATATGGGGTGCCACAGCAAGAATTATGAGGCAATTAGCTTC
TCAATATCAAGTATAA

Upstream 100 bases:

>100_bases
TATTTTTCACAACATGGCCGTTTCGATGCCAATATCGCGATACGTACGGTGACAGCCAAAGATAATGTTTTGTATTTGGC
AGCAGGAGGGGGAATAGTTA

Downstream 100 bases:

>100_bases
TACCAGGATGATTAAAGGCATTTTTTTAAATGCCTTTACCTGATTATTAAACCAAATTAGAGAAATCGTATGCTACAAAT
TGTACAAATCAAATTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTPIGKMNIVNVSQKLLQLSMESNNTQQSIKTHSSVIVLHDLSKDSLILTRRSQMLKKHPGEVCFPGGFQEINDQDLYST
ALRELNEELGVTSERITLIRKLSIEKTLMGLVIHPWYASIDSIFPYTMNPQEVSELILVPMPLVKNQKNYKEIRIEKEGK
HIVTCQFIANEELIWGATARIMRQLASQYQV

Sequences:

>Translated_191_residues
MTPIGKMNIVNVSQKLLQLSMESNNTQQSIKTHSSVIVLHDLSKDSLILTRRSQMLKKHPGEVCFPGGFQEINDQDLYST
ALRELNEELGVTSERITLIRKLSIEKTLMGLVIHPWYASIDSIFPYTMNPQEVSELILVPMPLVKNQKNYKEIRIEKEGK
HIVTCQFIANEELIWGATARIMRQLASQYQV
>Mature_190_residues
TPIGKMNIVNVSQKLLQLSMESNNTQQSIKTHSSVIVLHDLSKDSLILTRRSQMLKKHPGEVCFPGGFQEINDQDLYSTA
LRELNEELGVTSERITLIRKLSIEKTLMGLVIHPWYASIDSIFPYTMNPQEVSELILVPMPLVKNQKNYKEIRIEKEGKH
IVTCQFIANEELIWGATARIMRQLASQYQV

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=99, Percent_Identity=38.3838383838384, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17510677, Length=132, Percent_Identity=31.8181818181818, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21853; Mature: 21722

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIGKMNIVNVSQKLLQLSMESNNTQQSIKTHSSVIVLHDLSKDSLILTRRSQMLKKHP
CCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHCC
GEVCFPGGFQEINDQDLYSTALRELNEELGVTSERITLIRKLSIEKTLMGLVIHPWYASI
CCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DSIFPYTMNPQEVSELILVPMPLVKNQKNYKEIRIEKEGKHIVTCQFIANEELIWGATAR
HCCCCCCCCHHHHHHHHHCCCCHHCCCCCCEEEEEECCCCEEEEEEEECCCCEEEHHHHH
IMRQLASQYQV
HHHHHHHHCCC
>Mature Secondary Structure 
TPIGKMNIVNVSQKLLQLSMESNNTQQSIKTHSSVIVLHDLSKDSLILTRRSQMLKKHP
CCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHCC
GEVCFPGGFQEINDQDLYSTALRELNEELGVTSERITLIRKLSIEKTLMGLVIHPWYASI
CCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DSIFPYTMNPQEVSELILVPMPLVKNQKNYKEIRIEKEGKHIVTCQFIANEELIWGATAR
HCCCCCCCCHHHHHHHHHCCCCHHCCCCCCEEEEEECCCCEEEEEEEECCCCEEEHHHHH
IMRQLASQYQV
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA