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The map label for this gene is yrbE6B [C]

Identifier: 54027606

GI number: 54027606

Start: 5972979

End: 5973842

Strand: Reverse

Name: yrbE6B [C]

Synonym: nfa56320

Alternate gene names: 54027606

Gene position: 5973842-5972979 (Counterclockwise)

Preceding gene: 54027607

Following gene: 54027605

Centisome position: 99.21

GC content: 65.97

Gene sequence:

>864_bases
GTGTCGTCAACGTATGTGCCGCCGCTGCTGCGGCCGCTCCAGCAGCTCAAGCGATCGGCGCAGGCGCCGGTCGACCTGAT
CGCGCGCATCGGCCATCAGGTGTTCTTCTTCCTGCGCTCGGTGGGCTCGATCCCGTTGGCGCTCAAGCAGTATCCCAAGG
AAGTCTGGCGCCTGCTCACCGACGTCACCTGGGGCAACGGCAACCTGGTCGTCGGCGGCGGCACCATCGGCGTCGTCGTC
ATCCTCAGTGCCTTCGGCGGCATGACGGTCGGCATCCAGGGCCACACCTCGCTGAATCTGCTCGGGCTGAGCCCGATCAC
CGGCGCGATCTCGGCCTTCGCGACCACCCGCGAACTCGGCCCGCTGCTGGCCTCGTTGGCCTTCGCCGCGCAGGCGGGCT
GTCGCTTCACCGCGCAACTGGGCGCGATGCGCATCTCCGAGGAGATCGACGCGCTGGAGTCGGTGGCCATCCGCCCGCTG
CCGTACCTGGTGAGCACCAGGATGTTCGCGGCGATCGTCGCGATCGTGCCGCTGTACTGCCTCGGCCTCGCGGTCGCCTA
CATCTCCTGCGCGCTGACCGTGCAGTTGGTCGGCGACACCGCCGAGGGCACCTACCAGCACTACTTCTACCAGTTCCTGA
TACCGACCGATGTGCTGTACTCGCTGCTCAAAGCGATCTTGTTCGTCGCGATCACCACGTTCATCCAGTGCTATTACGGG
TTCTTCGCCTCCGGCGGCCCGGAGGGCGTCGGTGTGGCGGCCGGTCGCGCGATCAAGATGTGCATCATCCTGGTCGTGTT
CGCCGACCTGTTCATGACGTTGGCCATCTGGGGAGTCAATCCCGGAATCCGGATCTCGGGGTAA

Upstream 100 bases:

>100_bases
AACTCCGCTGTGGTGAGCTCGGCGATCATGCTGTTCGGCGTGAATCTCGGGATCACGCAGATCTACAGCGCCCTATTCCC
CCCACAGGTGGTCTGAGCCG

Downstream 100 bases:

>100_bases
GGGCAGATGATCATCGATCCCAGTGGGCGTGGACCCACGATGCGGCAGTTGCTGATCGCCGGCGTGTGCGGACTGTTGGT
CTTCGCGGTGGTGCTCGGCT

Product: putative YrbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MSSTYVPPLLRPLQQLKRSAQAPVDLIARIGHQVFFFLRSVGSIPLALKQYPKEVWRLLTDVTWGNGNLVVGGGTIGVVV
ILSAFGGMTVGIQGHTSLNLLGLSPITGAISAFATTRELGPLLASLAFAAQAGCRFTAQLGAMRISEEIDALESVAIRPL
PYLVSTRMFAAIVAIVPLYCLGLAVAYISCALTVQLVGDTAEGTYQHYFYQFLIPTDVLYSLLKAILFVAITTFIQCYYG
FFASGGPEGVGVAAGRAIKMCIILVVFADLFMTLAIWGVNPGIRISG

Sequences:

>Translated_287_residues
MSSTYVPPLLRPLQQLKRSAQAPVDLIARIGHQVFFFLRSVGSIPLALKQYPKEVWRLLTDVTWGNGNLVVGGGTIGVVV
ILSAFGGMTVGIQGHTSLNLLGLSPITGAISAFATTRELGPLLASLAFAAQAGCRFTAQLGAMRISEEIDALESVAIRPL
PYLVSTRMFAAIVAIVPLYCLGLAVAYISCALTVQLVGDTAEGTYQHYFYQFLIPTDVLYSLLKAILFVAITTFIQCYYG
FFASGGPEGVGVAAGRAIKMCIILVVFADLFMTLAIWGVNPGIRISG
>Mature_286_residues
SSTYVPPLLRPLQQLKRSAQAPVDLIARIGHQVFFFLRSVGSIPLALKQYPKEVWRLLTDVTWGNGNLVVGGGTIGVVVI
LSAFGGMTVGIQGHTSLNLLGLSPITGAISAFATTRELGPLLASLAFAAQAGCRFTAQLGAMRISEEIDALESVAIRPLP
YLVSTRMFAAIVAIVPLYCLGLAVAYISCALTVQLVGDTAEGTYQHYFYQFLIPTDVLYSLLKAILFVAITTFIQCYYGF
FASGGPEGVGVAAGRAIKMCIILVVFADLFMTLAIWGVNPGIRISG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=206, Percent_Identity=27.6699029126214, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 30614; Mature: 30482

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTYVPPLLRPLQQLKRSAQAPVDLIARIGHQVFFFLRSVGSIPLALKQYPKEVWRLLT
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DVTWGNGNLVVGGGTIGVVVILSAFGGMTVGIQGHTSLNLLGLSPITGAISAFATTRELG
HCCCCCCCEEEECHHHHHHHHHHHHCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHH
PLLASLAFAAQAGCRFTAQLGAMRISEEIDALESVAIRPLPYLVSTRMFAAIVAIVPLYC
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LGLAVAYISCALTVQLVGDTAEGTYQHYFYQFLIPTDVLYSLLKAILFVAITTFIQCYYG
HHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFASGGPEGVGVAAGRAIKMCIILVVFADLFMTLAIWGVNPGIRISG
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
SSTYVPPLLRPLQQLKRSAQAPVDLIARIGHQVFFFLRSVGSIPLALKQYPKEVWRLLT
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DVTWGNGNLVVGGGTIGVVVILSAFGGMTVGIQGHTSLNLLGLSPITGAISAFATTRELG
HCCCCCCCEEEECHHHHHHHHHHHHCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHH
PLLASLAFAAQAGCRFTAQLGAMRISEEIDALESVAIRPLPYLVSTRMFAAIVAIVPLYC
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LGLAVAYISCALTVQLVGDTAEGTYQHYFYQFLIPTDVLYSLLKAILFVAITTFIQCYYG
HHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFASGGPEGVGVAAGRAIKMCIILVVFADLFMTLAIWGVNPGIRISG
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA