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The map label for this gene is mce6A

Identifier: 54027605

GI number: 54027605

Start: 5971464

End: 5972972

Strand: Reverse

Name: mce6A

Synonym: nfa56310

Alternate gene names: NA

Gene position: 5972972-5971464 (Counterclockwise)

Preceding gene: 54027606

Following gene: 54027604

Centisome position: 99.2

GC content: 70.38

Gene sequence:

>1509_bases
ATGATCATCGATCCCAGTGGGCGTGGACCCACGATGCGGCAGTTGCTGATCGCCGGCGTGTGCGGACTGTTGGTCTTCGC
GGTGGTGCTCGGCTTTCTGATGGCCCGCTACCAGGGCTACTTCGTACCGAAGGTGAACGTGGTCGCGAACCTGACCACCA
CCGGTGACGGCCTGCCCTCCGAGGCGGACGTCAAGTTCCGCGGTGTGCTGGTCGGCGCGGTCGACGAGGTCGAGGTGGCC
GCCAAGGGCGAGTTGCAGAAGGTGCAGATCGAACTGAAGCCGGAGTACGCCAAGAGCATCCCGGCCAACGTGACCGCCCG
CGTGGTGCCGAGCAACCTGTTCGCGGTGACCTCGGTGGAACTGGTCTTCAACGGCCCCTCCGACACCTACCTGAGCGAGG
GCTCGGTGATCGAGGAGGACCGCAGCAAGGGCACCATCGCGCTACAGGACACGCTGACCACCGTCCGCAACATCCTGGAC
AAGATCGATCCGGTGCAGTTCGGCCGGGTGCTCGGCACCCTGTCGCAGGCACTCGACGGCAGCGGCCGGATGCCCGGCTC
CACCATCGAGCGGATGGACCGCTGGGTGCAGTCGGTCGACGACGCCATCCCGGACCTGGGTGTGCTGCTGACCGATTTCT
CGAATTCCTTCGCGGCGCTGAACGAATCGGCTCCCGAACTGGTCGACGTGCTCGGCAGCTCGGTGCTGACCGCGCGTACC
GTGGCCGATCGCCGCAGCGAGCTGGTCGCGTTGATCACCGGGACCGGTGGCACCGTCGACGCGGTGAACAACCTGTTCGC
GCGCAATCCCGACGTCGGCAAGCAGGTCACCGCCGGAACCGCCGACGCGTTCGGCGCGCTCGCGTCCGACCCGCAGGCGA
TCACCCGGTCGCTGCTCAATCTGAGCGAGTCGGTGCGCAAGCTGAACACCACCTTCCACTGGGGTCCCTCGCAGCAGATG
GTGTGGGACGCGGGCATCACGCTCACCCCGTACAAGCCGTACACGGTGGCGGACTGCCCCCGTTACGGCGAGATGGCCGG
GCCGAGCTGCTTCACCGCCCCCGCGGTGAACGAGCTGCCGCCGCTGCCGGAGAACCTGCGCCCCCGCGCGCTGGAGTCGG
CGAAGGGGCTGCCGCCGGTGGTGCCGATGCCGGGCTTCCCGCTGATCCCCGGCGTCACCACGCCGGACCCGAGCCGGGCC
GCCGCCGCGCAGTCGCCCGCCGCGCCGTCGCCGTTCGCGGGCACGCCGCTGGAAGGCCTCGTACCCGCGCTGCCGTCGCT
GCCCGGTCTGCCGGGGTTGCCCGGCCAGGCCGCGCAGCCGCAGGCCGCCCAGCCCGGCGCGACACCGGCCGCGGCGACCA
GCACCCCGCAGGCGGGCGCGATCTCCTACCGCGGGGACGACGCGATCGCCGCGCTGCTCGGTCGCAAGCCGACGGCCGCG
GAGTACCTGCTGCTGAGCCCGATCCTGAAGGGCGGAACCATGACCGTGTCCGAGAGCGGGGCGAGCTGA

Upstream 100 bases:

>100_bases
GATCAAGATGTGCATCATCCTGGTCGTGTTCGCCGACCTGTTCATGACGTTGGCCATCTGGGGAGTCAATCCCGGAATCC
GGATCTCGGGGTAAGGGCAG

Downstream 100 bases:

>100_bases
TGAGCATCCGCAAGCCCCTGATCGGCTTCTCCATCTTCGCCATCGTCTCGATCCTGGTGACCGTGCTGGTGTGGAACACG
TTGGCGCGCACCGTGAGTGG

Product: putative Mce family protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; MCE Family Protein; Mce Family A; Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; MCE-Family Protein; Virulence Factor MCE-Like Protein; Mce Protein Mce5A; Mce-Related Protein

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MIIDPSGRGPTMRQLLIAGVCGLLVFAVVLGFLMARYQGYFVPKVNVVANLTTTGDGLPSEADVKFRGVLVGAVDEVEVA
AKGELQKVQIELKPEYAKSIPANVTARVVPSNLFAVTSVELVFNGPSDTYLSEGSVIEEDRSKGTIALQDTLTTVRNILD
KIDPVQFGRVLGTLSQALDGSGRMPGSTIERMDRWVQSVDDAIPDLGVLLTDFSNSFAALNESAPELVDVLGSSVLTART
VADRRSELVALITGTGGTVDAVNNLFARNPDVGKQVTAGTADAFGALASDPQAITRSLLNLSESVRKLNTTFHWGPSQQM
VWDAGITLTPYKPYTVADCPRYGEMAGPSCFTAPAVNELPPLPENLRPRALESAKGLPPVVPMPGFPLIPGVTTPDPSRA
AAAQSPAAPSPFAGTPLEGLVPALPSLPGLPGLPGQAAQPQAAQPGATPAAATSTPQAGAISYRGDDAIAALLGRKPTAA
EYLLLSPILKGGTMTVSESGAS

Sequences:

>Translated_502_residues
MIIDPSGRGPTMRQLLIAGVCGLLVFAVVLGFLMARYQGYFVPKVNVVANLTTTGDGLPSEADVKFRGVLVGAVDEVEVA
AKGELQKVQIELKPEYAKSIPANVTARVVPSNLFAVTSVELVFNGPSDTYLSEGSVIEEDRSKGTIALQDTLTTVRNILD
KIDPVQFGRVLGTLSQALDGSGRMPGSTIERMDRWVQSVDDAIPDLGVLLTDFSNSFAALNESAPELVDVLGSSVLTART
VADRRSELVALITGTGGTVDAVNNLFARNPDVGKQVTAGTADAFGALASDPQAITRSLLNLSESVRKLNTTFHWGPSQQM
VWDAGITLTPYKPYTVADCPRYGEMAGPSCFTAPAVNELPPLPENLRPRALESAKGLPPVVPMPGFPLIPGVTTPDPSRA
AAAQSPAAPSPFAGTPLEGLVPALPSLPGLPGLPGQAAQPQAAQPGATPAAATSTPQAGAISYRGDDAIAALLGRKPTAA
EYLLLSPILKGGTMTVSESGAS
>Mature_502_residues
MIIDPSGRGPTMRQLLIAGVCGLLVFAVVLGFLMARYQGYFVPKVNVVANLTTTGDGLPSEADVKFRGVLVGAVDEVEVA
AKGELQKVQIELKPEYAKSIPANVTARVVPSNLFAVTSVELVFNGPSDTYLSEGSVIEEDRSKGTIALQDTLTTVRNILD
KIDPVQFGRVLGTLSQALDGSGRMPGSTIERMDRWVQSVDDAIPDLGVLLTDFSNSFAALNESAPELVDVLGSSVLTART
VADRRSELVALITGTGGTVDAVNNLFARNPDVGKQVTAGTADAFGALASDPQAITRSLLNLSESVRKLNTTFHWGPSQQM
VWDAGITLTPYKPYTVADCPRYGEMAGPSCFTAPAVNELPPLPENLRPRALESAKGLPPVVPMPGFPLIPGVTTPDPSRA
AAAQSPAAPSPFAGTPLEGLVPALPSLPGLPGLPGQAAQPQAAQPGATPAAATSTPQAGAISYRGDDAIAALLGRKPTAA
EYLLLSPILKGGTMTVSESGAS

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52155; Mature: 52155

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDPSGRGPTMRQLLIAGVCGLLVFAVVLGFLMARYQGYFVPKVNVVANLTTTGDGLPS
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCC
EADVKFRGVLVGAVDEVEVAAKGELQKVQIELKPEYAKSIPANVTARVVPSNLFAVTSVE
CCCEEEEEEEEECCCCCHHHCCCCEEEEEEEECCHHHHCCCCCCEEEECCCCEEEEEEEE
LVFNGPSDTYLSEGSVIEEDRSKGTIALQDTLTTVRNILDKIDPVQFGRVLGTLSQALDG
EEEECCCCCEECCCCEECCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
SGRMPGSTIERMDRWVQSVDDAIPDLGVLLTDFSNSFAALNESAPELVDVLGSSVLTART
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCHHHHHHHHCCHHHHHHH
VADRRSELVALITGTGGTVDAVNNLFARNPDVGKQVTAGTADAFGALASDPQAITRSLLN
HHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEECCCCHHHHHHHCCCHHHHHHHHHH
LSESVRKLNTTFHWGPSQQMVWDAGITLTPYKPYTVADCPRYGEMAGPSCFTAPAVNELP
HHHHHHHHCCEEEECCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
PLPENLRPRALESAKGLPPVVPMPGFPLIPGVTTPDPSRAAAAQSPAAPSPFAGTPLEGL
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHH
VPALPSLPGLPGLPGQAAQPQAAQPGATPAAATSTPQAGAISYRGDDAIAALLGRKPTAA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCHH
EYLLLSPILKGGTMTVSESGAS
HHHHHHHHHCCCEEEECCCCCC
>Mature Secondary Structure
MIIDPSGRGPTMRQLLIAGVCGLLVFAVVLGFLMARYQGYFVPKVNVVANLTTTGDGLPS
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCC
EADVKFRGVLVGAVDEVEVAAKGELQKVQIELKPEYAKSIPANVTARVVPSNLFAVTSVE
CCCEEEEEEEEECCCCCHHHCCCCEEEEEEEECCHHHHCCCCCCEEEECCCCEEEEEEEE
LVFNGPSDTYLSEGSVIEEDRSKGTIALQDTLTTVRNILDKIDPVQFGRVLGTLSQALDG
EEEECCCCCEECCCCEECCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
SGRMPGSTIERMDRWVQSVDDAIPDLGVLLTDFSNSFAALNESAPELVDVLGSSVLTART
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCHHHHHHHHCCHHHHHHH
VADRRSELVALITGTGGTVDAVNNLFARNPDVGKQVTAGTADAFGALASDPQAITRSLLN
HHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEECCCCHHHHHHHCCCHHHHHHHHHH
LSESVRKLNTTFHWGPSQQMVWDAGITLTPYKPYTVADCPRYGEMAGPSCFTAPAVNELP
HHHHHHHHCCEEEECCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
PLPENLRPRALESAKGLPPVVPMPGFPLIPGVTTPDPSRAAAAQSPAAPSPFAGTPLEGL
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHH
VPALPSLPGLPGLPGQAAQPQAAQPGATPAAATSTPQAGAISYRGDDAIAALLGRKPTAA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCHH
EYLLLSPILKGGTMTVSESGAS
HHHHHHHHHCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA