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The map label for this gene is yrbE6A [C]

Identifier: 54027607

GI number: 54027607

Start: 5973847

End: 5974701

Strand: Reverse

Name: yrbE6A [C]

Synonym: nfa56330

Alternate gene names: 54027607

Gene position: 5974701-5973847 (Counterclockwise)

Preceding gene: 54027609

Following gene: 54027606

Centisome position: 99.23

GC content: 66.9

Gene sequence:

>855_bases
GTGCAGTCGACCAAGAGTCCTCCCCGAGGATCCCGCATAAGTGAAGCGGTCGATTGGACGAGGGCCTATTGGGACGACCA
TCCGAAGCGCTCGCTGGAGACCTTCGGACGTCAGATCACCATGGGGATCTCGGCGGTCGCCGAGCTGTTCATCGCCATCT
TCCGGCGGCGGTTCCCGTTCGACGAATTCGTCCGGCAGTGCGCCTTCATGGCCAACGTCGCCGCGGCGCCCACGCTGCTC
GTCGCCATCCCCATCGGCGTCATCGTCTCGATCCAGGTCGGCGCCGTCGCCGGCCAGGTCGGTGCGACCTCGTTCATCGG
CGCGGCCAACGGTCTCGGCATCGTCCAGCAGGGCGCCCCGCTGGTCACCTCGATCATGATCGCGGGCGCGGTCGGCTCGG
CCATCTGCGCCGACCTCGGCTCGCGCACCATCCGCGAGGAGATCGACGCCATGAAGGTGATGGGCGTCGACCCGATGCGC
AGGCTGGTCGCGCCGCGGCTCGGCGCGGCCATGCTGGTCAGCGTGCTGCTGTGCGGCTTCGTGGTGTTCGTCGGCTTCCT
GACCGGCTACATCTTCAACATCTTCGCCCAGGGCGGCACCCCCGGTTCCTACATCGGCACCTTCTCCTCCTTCGCCGTCA
CCCGGGACCTGCTCGTCGCGCTGGTGAAGTCGTTGATCTTCGGTCTGCTGGCCGCGATCATCGCCTGCGACACGGGCCTG
AACACCCGTGGCGGCCCCGGTGGCGTCGCGAACTCGGTCAACTCCGCTGTGGTGAGCTCGGCGATCATGCTGTTCGGCGT
GAATCTCGGGATCACGCAGATCTACAGCGCCCTATTCCCCCCACAGGTGGTCTGA

Upstream 100 bases:

>100_bases
CGATCACATGTCGGTGGTGTGTTCCGCACTACCCCGTAGTAAGGTGCGTCAAGCAAACAAGTCGTCGGGGTACGCAACCG
GCGTCGAGAGGGGTTAGCCA

Downstream 100 bases:

>100_bases
GCCGGTGTCGTCAACGTATGTGCCGCCGCTGCTGCGGCCGCTCCAGCAGCTCAAGCGATCGGCGCAGGCGCCGGTCGACC
TGATCGCGCGCATCGGCCAT

Product: putative YrbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQSTKSPPRGSRISEAVDWTRAYWDDHPKRSLETFGRQITMGISAVAELFIAIFRRRFPFDEFVRQCAFMANVAAAPTLL
VAIPIGVIVSIQVGAVAGQVGATSFIGAANGLGIVQQGAPLVTSIMIAGAVGSAICADLGSRTIREEIDAMKVMGVDPMR
RLVAPRLGAAMLVSVLLCGFVVFVGFLTGYIFNIFAQGGTPGSYIGTFSSFAVTRDLLVALVKSLIFGLLAAIIACDTGL
NTRGGPGGVANSVNSAVVSSAIMLFGVNLGITQIYSALFPPQVV

Sequences:

>Translated_284_residues
MQSTKSPPRGSRISEAVDWTRAYWDDHPKRSLETFGRQITMGISAVAELFIAIFRRRFPFDEFVRQCAFMANVAAAPTLL
VAIPIGVIVSIQVGAVAGQVGATSFIGAANGLGIVQQGAPLVTSIMIAGAVGSAICADLGSRTIREEIDAMKVMGVDPMR
RLVAPRLGAAMLVSVLLCGFVVFVGFLTGYIFNIFAQGGTPGSYIGTFSSFAVTRDLLVALVKSLIFGLLAAIIACDTGL
NTRGGPGGVANSVNSAVVSSAIMLFGVNLGITQIYSALFPPQVV
>Mature_284_residues
MQSTKSPPRGSRISEAVDWTRAYWDDHPKRSLETFGRQITMGISAVAELFIAIFRRRFPFDEFVRQCAFMANVAAAPTLL
VAIPIGVIVSIQVGAVAGQVGATSFIGAANGLGIVQQGAPLVTSIMIAGAVGSAICADLGSRTIREEIDAMKVMGVDPMR
RLVAPRLGAAMLVSVLLCGFVVFVGFLTGYIFNIFAQGGTPGSYIGTFSSFAVTRDLLVALVKSLIFGLLAAIIACDTGL
NTRGGPGGVANSVNSAVVSSAIMLFGVNLGITQIYSALFPPQVV

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=254, Percent_Identity=26.7716535433071, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 29694; Mature: 29694

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure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CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]