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The map label for this gene is 54027234

Identifier: 54027234

GI number: 54027234

Start: 5560778

End: 5562166

Strand: Reverse

Name: 54027234

Synonym: nfa52600

Alternate gene names: NA

Gene position: 5562166-5560778 (Counterclockwise)

Preceding gene: 54027238

Following gene: 54027226

Centisome position: 92.38

GC content: 76.67

Gene sequence:

>1389_bases
ATGCTGGTGAAGATCAGGCCGGACGCGCAATTGTCCGCGGCCGAAGGCGAATTCGTCGACTGCCTGCGCTCGCTGCCGGT
CACCTGCCTGGCCCTGGTCGACGTGCGGGTCGATCGCGGCACCCGCCGGGTGGGCGCGGTGCTGGTGCTGCCCCGCGGGG
TGGCGGTGGTCGAGATCCGCGGCTTCCGGCGCAGGCAGAGCGGTATTCTCAGCGCCCGCGCCGACGCCGCCTGGACGATC
AGCGGCGACCCTGCCGACCTCGACGGCGAGACCGTGCCCGCGGACCGTCTCGAACACGCCCTCTACGCCGTGCGGACCAC
GCTGGAGCGGGCCCTGCTCGATCCCGGCCACGTCTGCGGCCTGGTGGCCCTCGTGCCGTTCCGCGGGGTGGTGGTGCGCC
CGTCCCGCATCGGCCTGCGCCCCGGCCGCGAGGTGCTGGTCGCCAACGTGACCGACGCCGCCGACCTGCGCGGCTACCTC
GAGAAATTCAATGCGGGGGAACGGGAATGGACCCCCGATCAGGTGCTCGCCGCGGCGCACGCGCTCGGCGTGAGCGACGG
TGTGGGCCGCGAGGACCTGACCGCGGACGGTTTCGGCGGCCCCCCGCCGGGCCCCCGGACCCGCCGCAACCCACTCTCGG
CATTCCGCCGCAAACCCGGCCCGCCACCGGCCCCGGCGTCCGCACCGGGAACCGAGCCCGGCATCAGCGCGGCGCCCAAT
GCCGGGGGCTTCGTCCCCGCCGGCGGAATCGACCGTCCCACCGCAGGATCCGGCCCGCGACAGCCCACACCAACCCCTCC
CGAGGCGCACCCGACGACGCCGGTCGTGGACCCCGCGGTCCCGCGTGCGAATCCCGCTGCCGACGCCGCCGACCCGGACA
CCTCCCCGCCCGCGGTGCCTGTCCAGGCCGCCGAACCTACGCCCGTTAGGGCGCCTTCCGACTCGCCCGGCCCGACCTCA
CCACCTCAGCCTGCCGCGCCCTCCCGGGCCGCCGATCCCACATCGGGTCGGGCGCCTTCCGACGGGTCGCCCGGCCCGAC
CTCACCACCGTCGCCCGTGGTGCCCGTCCGGGCCGCCGGCCCCATGCCGGTTCGGACGCATACCGAGTCGCCTCGCCAGA
GTCCGCCAACTCAGCCGGCGGCGCCCGTCCGGGCCGCCGCCACACCGGGCCGGTCGCCGATCGAGTCGCCCGGGCCCGAC
CCCACCCCCTCCGCCCGCGACCGGCGGCCCGCGCCCCGGCGGCTACGCCCCCGCGTTCGCCCCGCCCCGCTCCAGCCCCC
GCCCGCCGGGCCGCCGCTCCCCGCACCTGGCGAGCTGGTTGGTGCTGGCCGTGGCGTTCGTGGGGATCCTCGCCGTGTTC
GGCATGATCGTGACGGCCGTGGCCCGTGA

Upstream 100 bases:

>100_bases
CCTTCCGGTGGTTTTCCCCGCCGCGTACCGGCATCATCAGTACCGGTGCGGGGGTGGGGCGCCTCGTGCCACGGTGACGA
AGAGGGGCTGAGGTCGACGG

Downstream 100 bases:

>100_bases
CGACGACGATCCGCCCGCGGCACCGGCGGCCACCACCACCTCCACCACCGGCACCAGGCCGACCGCTCCGCCGCGTCCGA
GCGCGTGTTTCCCGTTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MLVKIRPDAQLSAAEGEFVDCLRSLPVTCLALVDVRVDRGTRRVGAVLVLPRGVAVVEIRGFRRRQSGILSARADAAWTI
SGDPADLDGETVPADRLEHALYAVRTTLERALLDPGHVCGLVALVPFRGVVVRPSRIGLRPGREVLVANVTDAADLRGYL
EKFNAGEREWTPDQVLAAAHALGVSDGVGREDLTADGFGGPPPGPRTRRNPLSAFRRKPGPPPAPASAPGTEPGISAAPN
AGGFVPAGGIDRPTAGSGPRQPTPTPPEAHPTTPVVDPAVPRANPAADAADPDTSPPAVPVQAAEPTPVRAPSDSPGPTS
PPQPAAPSRAADPTSGRAPSDGSPGPTSPPSPVVPVRAAGPMPVRTHTESPRQSPPTQPAAPVRAAATPGRSPIESPGPD
PTPSARDRRPAPRRLRPRVRPAPLQPPPAGPPLPAPGELVGAGRGVRGDPRRVRHDRDGRGP

Sequences:

>Translated_462_residues
MLVKIRPDAQLSAAEGEFVDCLRSLPVTCLALVDVRVDRGTRRVGAVLVLPRGVAVVEIRGFRRRQSGILSARADAAWTI
SGDPADLDGETVPADRLEHALYAVRTTLERALLDPGHVCGLVALVPFRGVVVRPSRIGLRPGREVLVANVTDAADLRGYL
EKFNAGEREWTPDQVLAAAHALGVSDGVGREDLTADGFGGPPPGPRTRRNPLSAFRRKPGPPPAPASAPGTEPGISAAPN
AGGFVPAGGIDRPTAGSGPRQPTPTPPEAHPTTPVVDPAVPRANPAADAADPDTSPPAVPVQAAEPTPVRAPSDSPGPTS
PPQPAAPSRAADPTSGRAPSDGSPGPTSPPSPVVPVRAAGPMPVRTHTESPRQSPPTQPAAPVRAAATPGRSPIESPGPD
PTPSARDRRPAPRRLRPRVRPAPLQPPPAGPPLPAPGELVGAGRGVRGDPRRVRHDRDGRGP
>Mature_462_residues
MLVKIRPDAQLSAAEGEFVDCLRSLPVTCLALVDVRVDRGTRRVGAVLVLPRGVAVVEIRGFRRRQSGILSARADAAWTI
SGDPADLDGETVPADRLEHALYAVRTTLERALLDPGHVCGLVALVPFRGVVVRPSRIGLRPGREVLVANVTDAADLRGYL
EKFNAGEREWTPDQVLAAAHALGVSDGVGREDLTADGFGGPPPGPRTRRNPLSAFRRKPGPPPAPASAPGTEPGISAAPN
AGGFVPAGGIDRPTAGSGPRQPTPTPPEAHPTTPVVDPAVPRANPAADAADPDTSPPAVPVQAAEPTPVRAPSDSPGPTS
PPQPAAPSRAADPTSGRAPSDGSPGPTSPPSPVVPVRAAGPMPVRTHTESPRQSPPTQPAAPVRAAATPGRSPIESPGPD
PTPSARDRRPAPRRLRPRVRPAPLQPPPAGPPLPAPGELVGAGRGVRGDPRRVRHDRDGRGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47623; Mature: 47623

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVKIRPDAQLSAAEGEFVDCLRSLPVTCLALVDVRVDRGTRRVGAVLVLPRGVAVVEIR
CEEEECCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEC
GFRRRQSGILSARADAAWTISGDPADLDGETVPADRLEHALYAVRTTLERALLDPGHVCG
CHHHHHHCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVALVPFRGVVVRPSRIGLRPGREVLVANVTDAADLRGYLEKFNAGEREWTPDQVLAAAH
HHHHHHCCCEEECCHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ALGVSDGVGREDLTADGFGGPPPGPRTRRNPLSAFRRKPGPPPAPASAPGTEPGISAAPN
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AGGFVPAGGIDRPTAGSGPRQPTPTPPEAHPTTPVVDPAVPRANPAADAADPDTSPPAVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VQAAEPTPVRAPSDSPGPTSPPQPAAPSRAADPTSGRAPSDGSPGPTSPPSPVVPVRAAG
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PMPVRTHTESPRQSPPTQPAAPVRAAATPGRSPIESPGPDPTPSARDRRPAPRRLRPRVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
PAPLQPPPAGPPLPAPGELVGAGRGVRGDPRRVRHDRDGRGP
CCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MLVKIRPDAQLSAAEGEFVDCLRSLPVTCLALVDVRVDRGTRRVGAVLVLPRGVAVVEIR
CEEEECCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEC
GFRRRQSGILSARADAAWTISGDPADLDGETVPADRLEHALYAVRTTLERALLDPGHVCG
CHHHHHHCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVALVPFRGVVVRPSRIGLRPGREVLVANVTDAADLRGYLEKFNAGEREWTPDQVLAAAH
HHHHHHCCCEEECCHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ALGVSDGVGREDLTADGFGGPPPGPRTRRNPLSAFRRKPGPPPAPASAPGTEPGISAAPN
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AGGFVPAGGIDRPTAGSGPRQPTPTPPEAHPTTPVVDPAVPRANPAADAADPDTSPPAVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VQAAEPTPVRAPSDSPGPTSPPQPAAPSRAADPTSGRAPSDGSPGPTSPPSPVVPVRAAG
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PMPVRTHTESPRQSPPTQPAAPVRAAATPGRSPIESPGPDPTPSARDRRPAPRRLRPRVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
PAPLQPPPAGPPLPAPGELVGAGRGVRGDPRRVRHDRDGRGP
CCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA