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The map label for this gene is yjiN [H]

Identifier: 54027184

GI number: 54027184

Start: 5504210

End: 5505553

Strand: Reverse

Name: yjiN [H]

Synonym: nfa52100

Alternate gene names: 54027184

Gene position: 5505553-5504210 (Counterclockwise)

Preceding gene: 54027192

Following gene: 54027183

Centisome position: 91.44

GC content: 68.23

Gene sequence:

>1344_bases
ATGGAGAAAGCTCCCGGCAACCTCACCGCCCCCGAGATCGCGGCACCGCCCGCGCCGGCGGTGACCCCCGCCGCGCCGAC
GGGATTCTTCGTCGACGAGACGGCCAAGCGCCGTGACCTGCGCAAGATGAAGACGCTGGCGACCGGCCTGCTCGCCGCGG
CGACGGCGATCTACCTGCTGTGCCGCTGGCTGGAGTCGCGCGGCGGCGGCGGTGAGTGGGTCGGCTACGTGCGCGCGGCC
GCCGAGGCGGGCATGGTCGGCGCGCTGGCGGACTGGTTCGCGGTCACGGCGTTGTTCCGGCATCCGCTCGGCCTGCCGAT
CCCGCACACCGCCATCATCCGGAAGAAGAAGGACCAGCTCGGCGCGAGTCTCGGCAGCTTCGTCGGCACCAACTTCCTCG
CGCCGGAGGTGGTGTCGGCGAAGGTGAACTCGGCCGAGGTGTCGTTGCGCGTCGGCCGCTGGATGGCCGATCCGGGGCAC
GCCGCGCGGGTGGCGCAGGAGAGTTCGACGATCCTGCGCGCCGTGGTCGGGGTGCTGCGCGACGAGGATGTCGAGCAGAT
CATCGACAACACGATCGTCAAGCGCATCGCCGAGCCGCTGTGGGGTCCGCCGATCGGTCGGGTGCTCGCGGAGCTGATCG
CCGACAACCGCCAGCTGGCGCTGCTGGACCTGCTTGCCGAGCGCGCGCACCAGTGGGCGCTGGGCAGCCAGGAAATCGTC
GACAAGGTGGTCATGGAGCAGGCGCCGCAGTGGGCGCCGAAATTCGTCAACATTCTGTTGTCGGAAAAGATCTACCGGGA
ATTGGTCGAATTCACCTGGAAGGTGCGCTCCGACCCCGAGCACGAGGTGCGCCTGGCCGCCAACCGGTTCCTCGAGGAAT
TCGCCCGCGACCTGCAATTCGACGACGCGATGATCAAGAAGGCCGAGCGGGTCAAGGCGCAGGTGATGGGCCGCGAGGAG
ATCACCGGCCTGGCCGAGGCCACCTGGCGGGCGGCCAAGCGGCTGATCCTGGAATCGGCCGACGATCCGAACAGCACGCT
GCGGCGTAAGGTCGGTGAGAACGTCCAGCAACTCGGCGAGCGCTTGCGCGACGACGCCGAGATGCGCGCCAAGGTCGACG
GCTGGATCGACCGCGGCGTGCGTTATCTGGTCGCCAACTACGCGGGCGAGATCACCACGCTGGTCACCGACACGGTCGCC
AAGTGGGACGCCGAGGAGGCGAGCAAGAAGATCGAATTGCAGGTGGGACGGGATCTGCAGTTCATCAGGATCAACGGCAC
GGTGGTCGGCGCGCTGGCCGGGCTGGTGATCTACACCGTCTCGCATTTGTTGTTCCCCGGCTGA

Upstream 100 bases:

>100_bases
GACAAGGTCTTCGGTGGACAGGGCAGGCTCCTTGGTCGTTGGGGTGGGGGTCGTGTCGGGTGGGTCGGCCTACAGCTTAT
GGCACAGCAGAATGGAGGAC

Downstream 100 bases:

>100_bases
GCCGGCGCGGGCGGTAGCCCCCGGAATTTCTGCTAACACGGTGCTTGCAAGAGCTAGCACCCTGACCTAGACTCGTTCTC
GTACAACCGCCAGAAGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MEKAPGNLTAPEIAAPPAPAVTPAAPTGFFVDETAKRRDLRKMKTLATGLLAAATAIYLLCRWLESRGGGGEWVGYVRAA
AEAGMVGALADWFAVTALFRHPLGLPIPHTAIIRKKKDQLGASLGSFVGTNFLAPEVVSAKVNSAEVSLRVGRWMADPGH
AARVAQESSTILRAVVGVLRDEDVEQIIDNTIVKRIAEPLWGPPIGRVLAELIADNRQLALLDLLAERAHQWALGSQEIV
DKVVMEQAPQWAPKFVNILLSEKIYRELVEFTWKVRSDPEHEVRLAANRFLEEFARDLQFDDAMIKKAERVKAQVMGREE
ITGLAEATWRAAKRLILESADDPNSTLRRKVGENVQQLGERLRDDAEMRAKVDGWIDRGVRYLVANYAGEITTLVTDTVA
KWDAEEASKKIELQVGRDLQFIRINGTVVGALAGLVIYTVSHLLFPG

Sequences:

>Translated_447_residues
MEKAPGNLTAPEIAAPPAPAVTPAAPTGFFVDETAKRRDLRKMKTLATGLLAAATAIYLLCRWLESRGGGGEWVGYVRAA
AEAGMVGALADWFAVTALFRHPLGLPIPHTAIIRKKKDQLGASLGSFVGTNFLAPEVVSAKVNSAEVSLRVGRWMADPGH
AARVAQESSTILRAVVGVLRDEDVEQIIDNTIVKRIAEPLWGPPIGRVLAELIADNRQLALLDLLAERAHQWALGSQEIV
DKVVMEQAPQWAPKFVNILLSEKIYRELVEFTWKVRSDPEHEVRLAANRFLEEFARDLQFDDAMIKKAERVKAQVMGREE
ITGLAEATWRAAKRLILESADDPNSTLRRKVGENVQQLGERLRDDAEMRAKVDGWIDRGVRYLVANYAGEITTLVTDTVA
KWDAEEASKKIELQVGRDLQFIRINGTVVGALAGLVIYTVSHLLFPG
>Mature_447_residues
MEKAPGNLTAPEIAAPPAPAVTPAAPTGFFVDETAKRRDLRKMKTLATGLLAAATAIYLLCRWLESRGGGGEWVGYVRAA
AEAGMVGALADWFAVTALFRHPLGLPIPHTAIIRKKKDQLGASLGSFVGTNFLAPEVVSAKVNSAEVSLRVGRWMADPGH
AARVAQESSTILRAVVGVLRDEDVEQIIDNTIVKRIAEPLWGPPIGRVLAELIADNRQLALLDLLAERAHQWALGSQEIV
DKVVMEQAPQWAPKFVNILLSEKIYRELVEFTWKVRSDPEHEVRLAANRFLEEFARDLQFDDAMIKKAERVKAQVMGREE
ITGLAEATWRAAKRLILESADDPNSTLRRKVGENVQQLGERLRDDAEMRAKVDGWIDRGVRYLVANYAGEITTLVTDTVA
KWDAEEASKKIELQVGRDLQFIRINGTVVGALAGLVIYTVSHLLFPG

Specific function: Unknown

COG id: COG2733

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790793, Length=392, Percent_Identity=31.1224489795918, Blast_Score=181, Evalue=9e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007383 [H]

Pfam domain/function: PF04286 DUF445 [H]

EC number: NA

Molecular weight: Translated: 49185; Mature: 49185

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKAPGNLTAPEIAAPPAPAVTPAAPTGFFVDETAKRRDLRKMKTLATGLLAAATAIYLL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRWLESRGGGGEWVGYVRAAAEAGMVGALADWFAVTALFRHPLGLPIPHTAIIRKKKDQL
HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GASLGSFVGTNFLAPEVVSAKVNSAEVSLRVGRWMADPGHAARVAQESSTILRAVVGVLR
HHHHHHHHCCCCCCHHHHHHCCCCHHEEEEHHCEECCCCHHHHHHHHHHHHHHHHHHHHC
DEDVEQIIDNTIVKRIAEPLWGPPIGRVLAELIADNRQLALLDLLAERAHQWALGSQEIV
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
DKVVMEQAPQWAPKFVNILLSEKIYRELVEFTWKVRSDPEHEVRLAANRFLEEFARDLQF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
DDAMIKKAERVKAQVMGREEITGLAEATWRAAKRLILESADDPNSTLRRKVGENVQQLGE
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RLRDDAEMRAKVDGWIDRGVRYLVANYAGEITTLVTDTVAKWDAEEASKKIELQVGRDLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHCEEEEEECCCEE
FIRINGTVVGALAGLVIYTVSHLLFPG
EEEECCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKAPGNLTAPEIAAPPAPAVTPAAPTGFFVDETAKRRDLRKMKTLATGLLAAATAIYLL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRWLESRGGGGEWVGYVRAAAEAGMVGALADWFAVTALFRHPLGLPIPHTAIIRKKKDQL
HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GASLGSFVGTNFLAPEVVSAKVNSAEVSLRVGRWMADPGHAARVAQESSTILRAVVGVLR
HHHHHHHHCCCCCCHHHHHHCCCCHHEEEEHHCEECCCCHHHHHHHHHHHHHHHHHHHHC
DEDVEQIIDNTIVKRIAEPLWGPPIGRVLAELIADNRQLALLDLLAERAHQWALGSQEIV
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
DKVVMEQAPQWAPKFVNILLSEKIYRELVEFTWKVRSDPEHEVRLAANRFLEEFARDLQF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
DDAMIKKAERVKAQVMGREEITGLAEATWRAAKRLILESADDPNSTLRRKVGENVQQLGE
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RLRDDAEMRAKVDGWIDRGVRYLVANYAGEITTLVTDTVAKWDAEEASKKIELQVGRDLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHCEEEEEECCCEE
FIRINGTVVGALAGLVIYTVSHLLFPG
EEEECCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]