| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is senX3 [H]
Identifier: 54027161
GI number: 54027161
Start: 5484126
End: 5485370
Strand: Reverse
Name: senX3 [H]
Synonym: nfa51870
Alternate gene names: 54027161
Gene position: 5485370-5484126 (Counterclockwise)
Preceding gene: 54027162
Following gene: 54027160
Centisome position: 91.1
GC content: 69.72
Gene sequence:
>1245_bases GTGAGCGTTCCGCAGGCCGTGTTGTTGGCAGTCCTCGCGGCTGTCGTCGGACTGGCCGTCGGCGGCTTGCTCATCCCGTA CGTGAACGCCCGGCAGGCCGCCCGTCGGCAGGCCGATTCCGGGCTCACCATGAGCCAGGTGCTCGACCTGATCGTGCTCG CCTCCGAGAGCGGCATCGCGGTGGTCGACCAGTACCGCGACGTGGTGCTGGTGAACCCGCGCGCCGAGGAACTCGGTCTG GTCCGCAATCGGCTGCTCGACGAGCGCGCCTGGGCGGCGGTGGAGAAGGTGCTGGCCACCGGCGAGTCCGCCGAGTTCGA CCTCACCGCGAAGAACCCGCTGCCCGGCCGCAGCCGCATCGCCGTGCGCGGTGTCGCGCGGCCGCTGTCGCAGGAGGAGA CCGGCTTCACGGTCCTGTTCGCCGACGACGATTCCGAGCAGGCCCGGATGGAGGCCACCCGCCGCGATTTCGTCGCCAAC GTCAGCCACGAGCTCAAGACGCCGGTGGGCGCGATGAGCCTGCTCGCCGAGGCATTGCTGGAATCGGCGGACGACCCCGA GGCGGTGCGCCACTTCGGCCAGCGCGTGCTCGGCGAGTCGCGCAGGCTCGGCAAGATGGTGACCGAGCTGATCGCGCTGT CGCGGTTGCAGGGCGCGGAGAAGCTGCCCGAACTCGAGGTCGTCGACGTCGACACCGTGGTCATGCAGGCGGTGGACCGC TCGCGCACGGCCGCGGAGGCCGCGGGCATCACCGTGAGCACCGACCGGCCAAGCGGCCTCGAGGTCCTCGGTGACGAGAC ACTGCTCGTCACCGCACTGTCGAACCTGGTCGAGAACGCGATCGCCTATTCGCCGCCCGGCTCGCACGTCTCGGTGAGCC GGTCGCTGCGCGGCAAGTACGTCGCGATGGCGGTCACCGACCGCGGCATCGGCATCGCCAAGGAAGACCAGGAGCGGGTG TTCGAACGGTTCTTCCGTTCCGACAAGGCGCGCTCGCGCGCCACCGGTGGTACCGGTCTCGGCCTCGCTATCGTCAAGCA CGTGGCGGCCAACCACAACGGTGAGATCACCCTGTGGAGCAAATTGGGCACCGGTTCGACGTTCACCCTGCGAATACCCG CCCACCTCGAGGCCGACAGCGGCGACGACGACGTCGACGCGGACGGCGCCGCGGTGAGCACGAAGGAAAACGGCTCGCGT CCCTCGGGGCCGGGCAGACCCAATGGTGTGGAGGCACGCAGATGA
Upstream 100 bases:
>100_bases GGGTAAACACCTGCCCAACAGGACAGGAATGGCCTGTGACCTGCGTGGAACTTCGCGAACCCGGCGTTGGTCACGCGGTC GGCGACCGTACGATTCAGGT
Downstream 100 bases:
>100_bases CGAGTGTTCTGATCGTCGAGGATGAGGAGTCGCTGGCCGATCCGCTCGCGTTCCTGCTGCGCAAGGAGGGCTTCGAGGTC ACCGTGGTGGGCGACGGTCC
Product: putative two-component system sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSVPQAVLLAVLAAVVGLAVGGLLIPYVNARQAARRQADSGLTMSQVLDLIVLASESGIAVVDQYRDVVLVNPRAEELGL VRNRLLDERAWAAVEKVLATGESAEFDLTAKNPLPGRSRIAVRGVARPLSQEETGFTVLFADDDSEQARMEATRRDFVAN VSHELKTPVGAMSLLAEALLESADDPEAVRHFGQRVLGESRRLGKMVTELIALSRLQGAEKLPELEVVDVDTVVMQAVDR SRTAAEAAGITVSTDRPSGLEVLGDETLLVTALSNLVENAIAYSPPGSHVSVSRSLRGKYVAMAVTDRGIGIAKEDQERV FERFFRSDKARSRATGGTGLGLAIVKHVAANHNGEITLWSKLGTGSTFTLRIPAHLEADSGDDDVDADGAAVSTKENGSR PSGPGRPNGVEARR
Sequences:
>Translated_414_residues MSVPQAVLLAVLAAVVGLAVGGLLIPYVNARQAARRQADSGLTMSQVLDLIVLASESGIAVVDQYRDVVLVNPRAEELGL VRNRLLDERAWAAVEKVLATGESAEFDLTAKNPLPGRSRIAVRGVARPLSQEETGFTVLFADDDSEQARMEATRRDFVAN VSHELKTPVGAMSLLAEALLESADDPEAVRHFGQRVLGESRRLGKMVTELIALSRLQGAEKLPELEVVDVDTVVMQAVDR SRTAAEAAGITVSTDRPSGLEVLGDETLLVTALSNLVENAIAYSPPGSHVSVSRSLRGKYVAMAVTDRGIGIAKEDQERV FERFFRSDKARSRATGGTGLGLAIVKHVAANHNGEITLWSKLGTGSTFTLRIPAHLEADSGDDDVDADGAAVSTKENGSR PSGPGRPNGVEARR >Mature_413_residues SVPQAVLLAVLAAVVGLAVGGLLIPYVNARQAARRQADSGLTMSQVLDLIVLASESGIAVVDQYRDVVLVNPRAEELGLV RNRLLDERAWAAVEKVLATGESAEFDLTAKNPLPGRSRIAVRGVARPLSQEETGFTVLFADDDSEQARMEATRRDFVANV SHELKTPVGAMSLLAEALLESADDPEAVRHFGQRVLGESRRLGKMVTELIALSRLQGAEKLPELEVVDVDTVVMQAVDRS RTAAEAAGITVSTDRPSGLEVLGDETLLVTALSNLVENAIAYSPPGSHVSVSRSLRGKYVAMAVTDRGIGIAKEDQERVF ERFFRSDKARSRATGGTGLGLAIVKHVAANHNGEITLWSKLGTGSTFTLRIPAHLEADSGDDDVDADGAAVSTKENGSRP SGPGRPNGVEARR
Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=249, Percent_Identity=36.5461847389558, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1790346, Length=209, Percent_Identity=30.622009569378, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1788393, Length=260, Percent_Identity=30, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1786783, Length=221, Percent_Identity=30.7692307692308, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI48994928, Length=259, Percent_Identity=28.1853281853282, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1790861, Length=221, Percent_Identity=31.6742081447964, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=29.4372294372294, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788713, Length=237, Percent_Identity=27.0042194092827, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1789149, Length=236, Percent_Identity=29.6610169491525, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI145693157, Length=239, Percent_Identity=30.1255230125523, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=32.1266968325792, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1788549, Length=350, Percent_Identity=26.2857142857143, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786912, Length=255, Percent_Identity=28.6274509803922, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1787894, Length=224, Percent_Identity=30.8035714285714, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1788279, Length=221, Percent_Identity=25.7918552036199, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789403, Length=204, Percent_Identity=29.9019607843137, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789808, Length=258, Percent_Identity=28.6821705426357, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790551, Length=218, Percent_Identity=32.1100917431193, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI87081816, Length=249, Percent_Identity=26.9076305220884, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 44053; Mature: 43922
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPQAVLLAVLAAVVGLAVGGLLIPYVNARQAARRQADSGLTMSQVLDLIVLASESGIA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEE VVDQYRDVVLVNPRAEELGLVRNRLLDERAWAAVEKVLATGESAEFDLTAKNPLPGRSRI EEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCE AVRGVARPLSQEETGFTVLFADDDSEQARMEATRRDFVANVSHELKTPVGAMSLLAEALL EHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ESADDPEAVRHFGQRVLGESRRLGKMVTELIALSRLQGAEKLPELEVVDVDTVVMQAVDR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECHHHHHHHHHHH SRTAAEAAGITVSTDRPSGLEVLGDETLLVTALSNLVENAIAYSPPGSHVSVSRSLRGKY HHHHHHHCCCEEECCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCCE VAMAVTDRGIGIAKEDQERVFERFFRSDKARSRATGGTGLGLAIVKHVAANHNGEITLWS EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEE KLGTGSTFTLRIPAHLEADSGDDDVDADGAAVSTKENGSRPSGPGRPNGVEARR ECCCCCEEEEEECCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVPQAVLLAVLAAVVGLAVGGLLIPYVNARQAARRQADSGLTMSQVLDLIVLASESGIA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEE VVDQYRDVVLVNPRAEELGLVRNRLLDERAWAAVEKVLATGESAEFDLTAKNPLPGRSRI EEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCE AVRGVARPLSQEETGFTVLFADDDSEQARMEATRRDFVANVSHELKTPVGAMSLLAEALL EHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ESADDPEAVRHFGQRVLGESRRLGKMVTELIALSRLQGAEKLPELEVVDVDTVVMQAVDR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECHHHHHHHHHHH SRTAAEAAGITVSTDRPSGLEVLGDETLLVTALSNLVENAIAYSPPGSHVSVSRSLRGKY HHHHHHHCCCEEECCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCCE VAMAVTDRGIGIAKEDQERVFERFFRSDKARSRATGGTGLGLAIVKHVAANHNGEITLWS EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEE KLGTGSTFTLRIPAHLEADSGDDDVDADGAAVSTKENGSRPSGPGRPNGVEARR ECCCCCEEEEEECCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA