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The map label for this gene is yrbE5B [C]

Identifier: 54027082

GI number: 54027082

Start: 5410471

End: 5411337

Strand: Reverse

Name: yrbE5B [C]

Synonym: nfa51080

Alternate gene names: 54027082

Gene position: 5411337-5410471 (Counterclockwise)

Preceding gene: 54027083

Following gene: 54027081

Centisome position: 89.87

GC content: 68.51

Gene sequence:

>867_bases
ATGGCAACCACCTATCGCAACCCGGCCCTCGCCAAGACCGTCCGCCGGGCCGGTGAGATCGCGCGTGCACCGCTGAACGT
GGTGGACCGCGCGGGCGAGCAGATGTCGTTCTACGCCCGCGCGATCGCCTGGATCCCCCGCGCGGCGGTGCATTACCGCA
AGGAGGTCATGCGGCTGCTGGCCGAGGTGACCTTCGGTTCCGGCGCGCTCGCGGTGATCGGCGGCACCATCGGCGTCATC
GTCTTCATGTCCGGTTCGGTCGGCGTCGTGGTCGGCCTGCAGGGCTTCAAGGCGCTCGACGCGATCGGCAGTTCGGTGCT
CACCGGCTTCCTCACCGCCTACATCAACACCCGCGAGATCGCCCCGCTGGTGGCGGCATTGGCGCTCTCGGCCACGGTCG
GCTGCGGGTTCACCGCGCAACTGGGCGCGATGCGGATCTCCGAGGAGATCGACGCGCTCGAGGTGATGGCGGTGCCCGGG
GTGCCGTTCCTGGTGACCACCCGGGTGATCGCGGGCTTCCTCGCGGTGATCCCGCTCTACATCGTCGGCCTGCTCGGCGC
GTACTTCGCCTCGCGCTCGATCAGCATCTGGTTCAACGGCCAGTCCAGCGGGTCCTACGACCACTACTTCAGCCTGTTCC
TGCCACCGGAGGACGTGCTCTATTCGTTCCTCAAGGTGCTGGTGTTCGCGTTCGTGATCATCCTGGTGCACTGCTACTAC
GGCTTCACCGCCACCGGCGGCCCCGCGGGCGTCGGCGTCGCGGTCGGCCGGGCGGTGCGCGCGGCGATCGTGCTGGTCAA
CGTGCTGGATTTCTTCCTGTCGCTGGCCATCTGGGGCACGACGACCACGGTCCGGGTGGCGGGGTGA

Upstream 100 bases:

>100_bases
GAACCAGTCCGTGGTGATCACGTTCCTGGTGCTCTTCTTCGTCAATCTGATCTTGACGTTGGTGTACCTGCAGGTCGTCC
CGGCCAAGGGTTCCTGATCG

Downstream 100 bases:

>100_bases
GCGCATGAGGCAGACCTGGCGGGCCACCGAGAAGCTGCGCGTGCGCGTGCTCGGACTGGTCTTCTTCGTGGTCGTGGCGC
TGTTCCTGTGGACGACCGTC

Product: putative YrbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MATTYRNPALAKTVRRAGEIARAPLNVVDRAGEQMSFYARAIAWIPRAAVHYRKEVMRLLAEVTFGSGALAVIGGTIGVI
VFMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREIAPLVAALALSATVGCGFTAQLGAMRISEEIDALEVMAVPG
VPFLVTTRVIAGFLAVIPLYIVGLLGAYFASRSISIWFNGQSSGSYDHYFSLFLPPEDVLYSFLKVLVFAFVIILVHCYY
GFTATGGPAGVGVAVGRAVRAAIVLVNVLDFFLSLAIWGTTTTVRVAG

Sequences:

>Translated_288_residues
MATTYRNPALAKTVRRAGEIARAPLNVVDRAGEQMSFYARAIAWIPRAAVHYRKEVMRLLAEVTFGSGALAVIGGTIGVI
VFMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREIAPLVAALALSATVGCGFTAQLGAMRISEEIDALEVMAVPG
VPFLVTTRVIAGFLAVIPLYIVGLLGAYFASRSISIWFNGQSSGSYDHYFSLFLPPEDVLYSFLKVLVFAFVIILVHCYY
GFTATGGPAGVGVAVGRAVRAAIVLVNVLDFFLSLAIWGTTTTVRVAG
>Mature_287_residues
ATTYRNPALAKTVRRAGEIARAPLNVVDRAGEQMSFYARAIAWIPRAAVHYRKEVMRLLAEVTFGSGALAVIGGTIGVIV
FMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREIAPLVAALALSATVGCGFTAQLGAMRISEEIDALEVMAVPGV
PFLVTTRVIAGFLAVIPLYIVGLLGAYFASRSISIWFNGQSSGSYDHYFSLFLPPEDVLYSFLKVLVFAFVIILVHCYYG
FTATGGPAGVGVAVGRAVRAAIVLVNVLDFFLSLAIWGTTTTVRVAG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=232, Percent_Identity=26.7241379310345, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 30412; Mature: 30281

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTYRNPALAKTVRRAGEIARAPLNVVDRAGEQMSFYARAIAWIPRAAVHYRKEVMRLL
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVTFGSGALAVIGGTIGVIVFMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREI
HHHHCCCCHHHHHHHHHEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHH
APLVAALALSATVGCGFTAQLGAMRISEEIDALEVMAVPGVPFLVTTRVIAGFLAVIPLY
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHEEECCCCHHHHHHHHHHHHHHHHHHH
IVGLLGAYFASRSISIWFNGQSSGSYDHYFSLFLPPEDVLYSFLKVLVFAFVIILVHCYY
HHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
GFTATGGPAGVGVAVGRAVRAAIVLVNVLDFFLSLAIWGTTTTVRVAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure 
ATTYRNPALAKTVRRAGEIARAPLNVVDRAGEQMSFYARAIAWIPRAAVHYRKEVMRLL
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVTFGSGALAVIGGTIGVIVFMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREI
HHHHCCCCHHHHHHHHHEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHH
APLVAALALSATVGCGFTAQLGAMRISEEIDALEVMAVPGVPFLVTTRVIAGFLAVIPLY
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHEEECCCCHHHHHHHHHHHHHHHHHHH
IVGLLGAYFASRSISIWFNGQSSGSYDHYFSLFLPPEDVLYSFLKVLVFAFVIILVHCYY
HHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
GFTATGGPAGVGVAVGRAVRAAIVLVNVLDFFLSLAIWGTTTTVRVAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]