Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is mce5A

Identifier: 54027081

GI number: 54027081

Start: 5409126

End: 5410466

Strand: Reverse

Name: mce5A

Synonym: nfa51070

Alternate gene names: NA

Gene position: 5410466-5409126 (Counterclockwise)

Preceding gene: 54027082

Following gene: 54027080

Centisome position: 89.86

GC content: 70.32

Gene sequence:

>1341_bases
ATGAGGCAGACCTGGCGGGCCACCGAGAAGCTGCGCGTGCGCGTGCTCGGACTGGTCTTCTTCGTGGTCGTGGCGCTGTT
CCTGTGGACGACCGTCGCGATCTACAACAAGCAGTTCACCCGTTCGGTCGAGGTCGAGCTGATCACCGACAGTGTGGGCA
ACGCGCTGACCCGCAACGCCGATGTGAAGGTGCGCGGGGTGACTGTCGGCGAGGTCCGCTCCAGCCGCGCGGGCGACGGC
GACGTGGTGTTGCGGCTGGCCATCGACCCCGACAAGGCCGAGCAGATCCCGGCCAACGCCACCGCCCGACTGCTGCCCAA
GACCCTGTTCGGCGAGCGCTACGTCGACCTGGTGATCCCGGCGGACCCGAGCCCGCAGCGGCTGCGCGACGGGGTGACCC
TGCATCAGGACCGCAGCGGCAACGCGATCGAGATCAGCAAGCTGCTCGACGATCTGCTCCCGCTGCTGCAGGCGATCCCG
CCGCAGGACCTGGCCGCCACCCTCGGCGCGCTGTCGCAGGCGCTGGCCGGGCAGGGCGCGATGCTCGGCGAGAGCATCGA
CAAGCTCGACACCATCTTCCGCGACGTCAACGGCGTGCTGCCGGAGCTGCAGGAAGGGCTGCGCAGCTTCGCCGAAACCG
CCGCGATCTACTCCGACGCCGCCCCGCAGCTGGTGACCGCGCTGGACAACCTGCGCACCACCAATGCCACCATCGTGCAG
CGGCGCTCCGACATCGACGCTCTGTACGCGACGCTGACTCCCGCCTCGACCCGCACCGCCGACTTCCTGGCGGCCAACCG
CGACAACATCATCGACGTGGCCGCCGACTCGCGGCCCGCACTGGAACTGCTGGCCACCTACTCGCCGACCTACGCCTGTG
CCATGGCCAATTTCGCGAAGATGAAGCCCCGGATCGACGAGATCTTCGGCAAGGGGACCGACCGGCCCGGCTCCCGGGTC
ACCATCGAGCTGACCAACACCCGTGGCCGCTACCTGCCCAACCAGGACGAGCCGCGCTGGCTGGACACCCGCGGCCCGTG
GTGCCTGGCCGAGTACCCGCTCGGTGTCGACCCCGGCCAGTACACCGGCGGCTCCGGCAACGACGGCTCGTATCAGCCGC
CCACCCGCTACCCGGGTGACCAGGACACCGGCAAGCTCGCGCCGCCGCAGTTCGGGGTGTACCCGGCGCAGGTGCCGACG
CTGGCCGGCTCGCCGGGCGAACAGCAGTCGCTCGGCGCGATCTACGGTGCGGCGCACGGTGTTTCCCCCGACGCGGTACC
GGGCTGGCTGACCAGGGTCGGTGCGCCCGCGTTCCGCGGCAGCGAGGTGAGCCTGCGATGA

Upstream 100 bases:

>100_bases
GCGGTGCGCGCGGCGATCGTGCTGGTCAACGTGCTGGATTTCTTCCTGTCGCTGGCCATCTGGGGCACGACGACCACGGT
CCGGGTGGCGGGGTGAGCGC

Downstream 100 bases:

>100_bases
AGGAGACGTTGCGCGGCCTGGGCGGGCCGCTGACCAAGCTGGCCGTGTTCGTGGCGGTGACCCTGTTCGTCACCACCGTG
CTCGCGCTCTCGATCGCCAA

Product: putative Mce family protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; Mce Family A; MCE Family Protein; MCE-Family Protein; Mce-Related Protein; MCE-Family; Virulence Factor

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MRQTWRATEKLRVRVLGLVFFVVVALFLWTTVAIYNKQFTRSVEVELITDSVGNALTRNADVKVRGVTVGEVRSSRAGDG
DVVLRLAIDPDKAEQIPANATARLLPKTLFGERYVDLVIPADPSPQRLRDGVTLHQDRSGNAIEISKLLDDLLPLLQAIP
PQDLAATLGALSQALAGQGAMLGESIDKLDTIFRDVNGVLPELQEGLRSFAETAAIYSDAAPQLVTALDNLRTTNATIVQ
RRSDIDALYATLTPASTRTADFLAANRDNIIDVAADSRPALELLATYSPTYACAMANFAKMKPRIDEIFGKGTDRPGSRV
TIELTNTRGRYLPNQDEPRWLDTRGPWCLAEYPLGVDPGQYTGGSGNDGSYQPPTRYPGDQDTGKLAPPQFGVYPAQVPT
LAGSPGEQQSLGAIYGAAHGVSPDAVPGWLTRVGAPAFRGSEVSLR

Sequences:

>Translated_446_residues
MRQTWRATEKLRVRVLGLVFFVVVALFLWTTVAIYNKQFTRSVEVELITDSVGNALTRNADVKVRGVTVGEVRSSRAGDG
DVVLRLAIDPDKAEQIPANATARLLPKTLFGERYVDLVIPADPSPQRLRDGVTLHQDRSGNAIEISKLLDDLLPLLQAIP
PQDLAATLGALSQALAGQGAMLGESIDKLDTIFRDVNGVLPELQEGLRSFAETAAIYSDAAPQLVTALDNLRTTNATIVQ
RRSDIDALYATLTPASTRTADFLAANRDNIIDVAADSRPALELLATYSPTYACAMANFAKMKPRIDEIFGKGTDRPGSRV
TIELTNTRGRYLPNQDEPRWLDTRGPWCLAEYPLGVDPGQYTGGSGNDGSYQPPTRYPGDQDTGKLAPPQFGVYPAQVPT
LAGSPGEQQSLGAIYGAAHGVSPDAVPGWLTRVGAPAFRGSEVSLR
>Mature_446_residues
MRQTWRATEKLRVRVLGLVFFVVVALFLWTTVAIYNKQFTRSVEVELITDSVGNALTRNADVKVRGVTVGEVRSSRAGDG
DVVLRLAIDPDKAEQIPANATARLLPKTLFGERYVDLVIPADPSPQRLRDGVTLHQDRSGNAIEISKLLDDLLPLLQAIP
PQDLAATLGALSQALAGQGAMLGESIDKLDTIFRDVNGVLPELQEGLRSFAETAAIYSDAAPQLVTALDNLRTTNATIVQ
RRSDIDALYATLTPASTRTADFLAANRDNIIDVAADSRPALELLATYSPTYACAMANFAKMKPRIDEIFGKGTDRPGSRV
TIELTNTRGRYLPNQDEPRWLDTRGPWCLAEYPLGVDPGQYTGGSGNDGSYQPPTRYPGDQDTGKLAPPQFGVYPAQVPT
LAGSPGEQQSLGAIYGAAHGVSPDAVPGWLTRVGAPAFRGSEVSLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48095; Mature: 48095

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQTWRATEKLRVRVLGLVFFVVVALFLWTTVAIYNKQFTRSVEVELITDSVGNALTRNA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHCHHHHCCC
DVKVRGVTVGEVRSSRAGDGDVVLRLAIDPDKAEQIPANATARLLPKTLFGERYVDLVIP
CEEEEEEEHHHHHCCCCCCCCEEEEEEECCCHHHHCCCCCHHHHHHHHHCCCCEEEEEEC
ADPSPQRLRDGVTLHQDRSGNAIEISKLLDDLLPLLQAIPPQDLAATLGALSQALAGQGA
CCCCHHHHHCCCEEEECCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
MLGESIDKLDTIFRDVNGVLPELQEGLRSFAETAAIYSDAAPQLVTALDNLRTTNATIVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHH
RRSDIDALYATLTPASTRTADFLAANRDNIIDVAADSRPALELLATYSPTYACAMANFAK
HHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHH
MKPRIDEIFGKGTDRPGSRVTIELTNTRGRYLPNQDEPRWLDTRGPWCLAEYPLGVDPGQ
HCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCC
YTGGSGNDGSYQPPTRYPGDQDTGKLAPPQFGVYPAQVPTLAGSPGEQQSLGAIYGAAHG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
VSPDAVPGWLTRVGAPAFRGSEVSLR
CCCCCCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRQTWRATEKLRVRVLGLVFFVVVALFLWTTVAIYNKQFTRSVEVELITDSVGNALTRNA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHCHHHHCCC
DVKVRGVTVGEVRSSRAGDGDVVLRLAIDPDKAEQIPANATARLLPKTLFGERYVDLVIP
CEEEEEEEHHHHHCCCCCCCCEEEEEEECCCHHHHCCCCCHHHHHHHHHCCCCEEEEEEC
ADPSPQRLRDGVTLHQDRSGNAIEISKLLDDLLPLLQAIPPQDLAATLGALSQALAGQGA
CCCCHHHHHCCCEEEECCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
MLGESIDKLDTIFRDVNGVLPELQEGLRSFAETAAIYSDAAPQLVTALDNLRTTNATIVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHH
RRSDIDALYATLTPASTRTADFLAANRDNIIDVAADSRPALELLATYSPTYACAMANFAK
HHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHH
MKPRIDEIFGKGTDRPGSRVTIELTNTRGRYLPNQDEPRWLDTRGPWCLAEYPLGVDPGQ
HCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCC
YTGGSGNDGSYQPPTRYPGDQDTGKLAPPQFGVYPAQVPTLAGSPGEQQSLGAIYGAAHG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
VSPDAVPGWLTRVGAPAFRGSEVSLR
CCCCCCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA