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The map label for this gene is yrbE5A [C]

Identifier: 54027083

GI number: 54027083

Start: 5411341

End: 5412135

Strand: Reverse

Name: yrbE5A [C]

Synonym: nfa51090

Alternate gene names: 54027083

Gene position: 5412135-5411341 (Counterclockwise)

Preceding gene: 54027084

Following gene: 54027082

Centisome position: 89.88

GC content: 67.67

Gene sequence:

>795_bases
GTGAATTCGACTTTGGCGCGTCTGCGCACACCGCTGGAGTCGGGGTTTGCGCAGGCGGGCAACGTGTTCGCGCTGTTCGT
GGACGTGCTGCGCAAGATGTTCCGCCGCCCGTTCCAGTGGCGCGAGTTCATCGAGCAGAGCTGGTTCATCGCGAGCGTTT
CCATCCTGCCCAGTGCCCTGGTGGCCATCCCGTTCGGCGCGGTGGTGGCGTTGCAGACCGGCTCGTTGATCAAGCAGCTC
GGCGCGGAGTCCTACACCGGCGCGACCAGCGTGCTCGCCACCGTGCAGCAGGCCGCGCCGGTGGTGACCGCGCTGATCAT
CGCGGGCGCCGCCGGGTCGGCGGTGGCCGCGGACCTCGGCTCGCGCACCATCCGCGAGGAGATCGACGCGATGGAGGTGC
TCGGCGTCGACCCGATCGCCCGCCTGGTCGTGCCGCGGGTGCTGGGCATGACGCTGGTCGCGGTGCTGCTCAACGGGCTG
GTGTCGGTGGTCGGCATCGCCGGCGGCTACTTCTTCAACGTGCTGCTGCAAGGCGGCACCCCGGGCGCGTACCTGTCCTC
GTTCTCCGCGCTGGCCCAGCTGCCCGACCTGTGGATCGGGGAGATCAAGGCGGCCATCTTCGGGCTGCTGGCGGGGGTCA
TCGCGGCCTACAAGGGGTTGCATCCCAAGGGGGGTCCGAAAGGAGTCGGTGACGCAGTGAACCAGTCCGTGGTGATCACG
TTCCTGGTGCTCTTCTTCGTCAATCTGATCTTGACGTTGGTGTACCTGCAGGTCGTCCCGGCCAAGGGTTCCTGA

Upstream 100 bases:

>100_bases
GACGACACCCAGGTACTGCCCGCCTACACCGGCGACTCCGGGGGAAACGCGTTCCAGACCACTGCGCCGCGGAACCTGAC
CAACGGGTAACATACGCCAC

Downstream 100 bases:

>100_bases
TCGATGGCAACCACCTATCGCAACCCGGCCCTCGCCAAGACCGTCCGCCGGGCCGGTGAGATCGCGCGTGCACCGCTGAA
CGTGGTGGACCGCGCGGGCG

Product: putative YrbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNSTLARLRTPLESGFAQAGNVFALFVDVLRKMFRRPFQWREFIEQSWFIASVSILPSALVAIPFGAVVALQTGSLIKQL
GAESYTGATSVLATVQQAAPVVTALIIAGAAGSAVAADLGSRTIREEIDAMEVLGVDPIARLVVPRVLGMTLVAVLLNGL
VSVVGIAGGYFFNVLLQGGTPGAYLSSFSALAQLPDLWIGEIKAAIFGLLAGVIAAYKGLHPKGGPKGVGDAVNQSVVIT
FLVLFFVNLILTLVYLQVVPAKGS

Sequences:

>Translated_264_residues
MNSTLARLRTPLESGFAQAGNVFALFVDVLRKMFRRPFQWREFIEQSWFIASVSILPSALVAIPFGAVVALQTGSLIKQL
GAESYTGATSVLATVQQAAPVVTALIIAGAAGSAVAADLGSRTIREEIDAMEVLGVDPIARLVVPRVLGMTLVAVLLNGL
VSVVGIAGGYFFNVLLQGGTPGAYLSSFSALAQLPDLWIGEIKAAIFGLLAGVIAAYKGLHPKGGPKGVGDAVNQSVVIT
FLVLFFVNLILTLVYLQVVPAKGS
>Mature_264_residues
MNSTLARLRTPLESGFAQAGNVFALFVDVLRKMFRRPFQWREFIEQSWFIASVSILPSALVAIPFGAVVALQTGSLIKQL
GAESYTGATSVLATVQQAAPVVTALIIAGAAGSAVAADLGSRTIREEIDAMEVLGVDPIARLVVPRVLGMTLVAVLLNGL
VSVVGIAGGYFFNVLLQGGTPGAYLSSFSALAQLPDLWIGEIKAAIFGLLAGVIAAYKGLHPKGGPKGVGDAVNQSVVIT
FLVLFFVNLILTLVYLQVVPAKGS

Specific function: Could be part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=211, Percent_Identity=27.9620853080569, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27582; Mature: 27582

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSTLARLRTPLESGFAQAGNVFALFVDVLRKMFRRPFQWREFIEQSWFIASVSILPSAL
CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VAIPFGAVVALQTGSLIKQLGAESYTGATSVLATVQQAAPVVTALIIAGAAGSAVAADLG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SRTIREEIDAMEVLGVDPIARLVVPRVLGMTLVAVLLNGLVSVVGIAGGYFFNVLLQGGT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGAYLSSFSALAQLPDLWIGEIKAAIFGLLAGVIAAYKGLHPKGGPKGVGDAVNQSVVIT
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
FLVLFFVNLILTLVYLQVVPAKGS
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA