| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is galU [H]
Identifier: 54026927
GI number: 54026927
Start: 5171572
End: 5172468
Strand: Reverse
Name: galU [H]
Synonym: nfa49530
Alternate gene names: 54026927
Gene position: 5172468-5171572 (Counterclockwise)
Preceding gene: 54026932
Following gene: 54026926
Centisome position: 85.9
GC content: 69.68
Gene sequence:
>897_bases GTGGTGCCGGCAGCGGGCCTGGGAACCCGGTTCCTGCCCGCGACCAAGACGGTGCCCAAGGAATTGCTGCCGGTGGTCGA CACTCCCGGCATCGAGCTCGTCGCCACCGAAGCCGCCGATTCCGGCGCGCAGCGACTGGTGATCGTGACCTCGCCCGGCA AGGACGGCGTCGTCGCGCATTTCGTCGAGGATCTGGTGCTGGAGAGCACGCTGGCCGAGCGTGGGAAGTTCCAGCTCCTG GAGAAGGTGCGCAAGGCGCCCGCCCTGCTGGACGTCACCTCCGTCGTGCAGGAGGAGCCGCTCGGCCTCGGGCACGCGGT GGCCCAGGCCGAGCAGGCCCTCGACGACGACGAGGACGCCGTCGCCGTGCTGCTGCCCGACGACCTGGTGCTGCCCTGCG GCGTCCTGGACGTGATGAGCCGGGTGCGCCGCAAACGCGGCGGCACCGTGCTGTGCGCCATCGACGTGCCCAAGGACCAG GTGAGTTCCTACGGTGTGTTCGATGTCGCACCGGTGCCCGACGCCGCCAACCCGAACGTGCTGCGAGTCAAGGGCATGGT GGAGAAGCCCGCCCTCGCCGACGCCCCCTCCACCTACGCCGCGGCCGGCCGCTACCTGCTCGACCGGGCGATCTTCGACG CGCTGCGCCGGATCGAGCCGGGCGCGGGCGGCGAGTTGCAGCTCACCGACGCCATCGCGCTGCTGATCGAGGAAGGACAT CCGGTCCATGTGGTCGTCCACCGTGGGTCGCGCCACGATTTGGGCAACCCCGGCGGCTATCTTCGAGCTGCGGTCGATTT CGCGTTGGAACGGGAAGAATACGGCCCCGCCCTGCGGGAGTGGCTGCAGCATCGCCTGAGTTCGGACTGGGATCCGCAGC TTACGACCTACGAGTAG
Upstream 100 bases:
>100_bases TGCGCGACGGAGTTCGGGCGGTGTGATGGATGGATAGGGTATGCGTATGACAGCAAAGGCCGGACAGTCCGACGGGGTCG TGTCGTGCTTCCGCACGGCG
Downstream 100 bases:
>100_bases GAGTCGTGCGCCGTTTTCGCCAGCCGTGCACCGTCGGGTACCAATGGTGCAGGCGAACGCGGCCCGTCCGGGACAGGTGA TCGCGGACAGGTAGCGGAGA
Product: putative UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MVPAAGLGTRFLPATKTVPKELLPVVDTPGIELVATEAADSGAQRLVIVTSPGKDGVVAHFVEDLVLESTLAERGKFQLL EKVRKAPALLDVTSVVQEEPLGLGHAVAQAEQALDDDEDAVAVLLPDDLVLPCGVLDVMSRVRRKRGGTVLCAIDVPKDQ VSSYGVFDVAPVPDAANPNVLRVKGMVEKPALADAPSTYAAAGRYLLDRAIFDALRRIEPGAGGELQLTDAIALLIEEGH PVHVVVHRGSRHDLGNPGGYLRAAVDFALEREEYGPALREWLQHRLSSDWDPQLTTYE
Sequences:
>Translated_298_residues MVPAAGLGTRFLPATKTVPKELLPVVDTPGIELVATEAADSGAQRLVIVTSPGKDGVVAHFVEDLVLESTLAERGKFQLL EKVRKAPALLDVTSVVQEEPLGLGHAVAQAEQALDDDEDAVAVLLPDDLVLPCGVLDVMSRVRRKRGGTVLCAIDVPKDQ VSSYGVFDVAPVPDAANPNVLRVKGMVEKPALADAPSTYAAAGRYLLDRAIFDALRRIEPGAGGELQLTDAIALLIEEGH PVHVVVHRGSRHDLGNPGGYLRAAVDFALEREEYGPALREWLQHRLSSDWDPQLTTYE >Mature_298_residues MVPAAGLGTRFLPATKTVPKELLPVVDTPGIELVATEAADSGAQRLVIVTSPGKDGVVAHFVEDLVLESTLAERGKFQLL EKVRKAPALLDVTSVVQEEPLGLGHAVAQAEQALDDDEDAVAVLLPDDLVLPCGVLDVMSRVRRKRGGTVLCAIDVPKDQ VSSYGVFDVAPVPDAANPNVLRVKGMVEKPALADAPSTYAAAGRYLLDRAIFDALRRIEPGAGGELQLTDAIALLIEEGH PVHVVVHRGSRHDLGNPGGYLRAAVDFALEREEYGPALREWLQHRLSSDWDPQLTTYE
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=291, Percent_Identity=39.1752577319588, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI1788355, Length=299, Percent_Identity=35.1170568561873, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1788351, Length=249, Percent_Identity=24.8995983935743, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 31932; Mature: 31932
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPAAGLGTRFLPATKTVPKELLPVVDTPGIELVATEAADSGAQRLVIVTSPGKDGVVAH CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCHHHH FVEDLVLESTLAERGKFQLLEKVRKAPALLDVTSVVQEEPLGLGHAVAQAEQALDDDEDA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCE VAVLLPDDLVLPCGVLDVMSRVRRKRGGTVLCAIDVPKDQVSSYGVFDVAPVPDAANPNV EEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCCEEECCCCCCCCCCE LRVKGMVEKPALADAPSTYAAAGRYLLDRAIFDALRRIEPGAGGELQLTDAIALLIEEGH EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCC PVHVVVHRGSRHDLGNPGGYLRAAVDFALEREEYGPALREWLQHRLSSDWDPQLTTYE CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVPAAGLGTRFLPATKTVPKELLPVVDTPGIELVATEAADSGAQRLVIVTSPGKDGVVAH CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCHHHH FVEDLVLESTLAERGKFQLLEKVRKAPALLDVTSVVQEEPLGLGHAVAQAEQALDDDEDA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCE VAVLLPDDLVLPCGVLDVMSRVRRKRGGTVLCAIDVPKDQVSSYGVFDVAPVPDAANPNV EEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCCEEECCCCCCCCCCE LRVKGMVEKPALADAPSTYAAAGRYLLDRAIFDALRRIEPGAGGELQLTDAIALLIEEGH EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCC PVHVVVHRGSRHDLGNPGGYLRAAVDFALEREEYGPALREWLQHRLSSDWDPQLTTYE CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8320212; 8126437; 9384377; 9298659 [H]