Click here to switch to the map view.

The map label for this gene is 54026932

Identifier: 54026932

GI number: 54026932

Start: 5174925

End: 5175611

Strand: Reverse

Name: 54026932

Synonym: nfa49580

Alternate gene names: NA

Gene position: 5175611-5174925 (Counterclockwise)

Preceding gene: 54026933

Following gene: 54026927

Centisome position: 85.96

GC content: 68.7

Gene sequence:

>687_bases
ATGAAACACATGATCAACCGTAAGAACCTGGCGCGGGTGGCGGGCGTTGGTGCCGCCACCGCGGTTGCCATGGGCCTGTT
CTCCACCGGCGCCGCCAACGCCGACACCTTCGTTCCGCTGCCCGGCGGCGAGATCACCAAGACCCTGTCCGACGGCACGG
TGGTGACCGTGCGTCTGGTGGGCGAGTCGGCGACCATCAGCCCGTCGATGGGCTCCACCCCGGTGCACCGCAACGCGTGG
GTGTCCGGTAGCGCGCAGGTCGAGATCAGCGGCGGCGGCGAGGATGTCGGCGGCAAGATCTACCCCGGTTACGTGGTGGG
CTGCCAGGTCAACATCAGCGGCGGCGGCGTCGAGGGCGGCGTGGAAGGCTCGGCCGACTGGAGCGGTGACACCGTGACCG
GTGGCGTGGGCGCCGAGTCCGGCGGCTCGTTGTCGCTCGGCCCCGGCCAGGCCGCGTCGTTCTACATCCTCGACCGTGAG
GTCCCGGACGACTACGGCAACGAGGATCACGCCACGAACAACAAGTTCAAGGGCAACAGCGGCTCGGTCACCTGGGCCGA
TTCGACCATCGGCCTGTCGGGCTGCGCGGGCTACGCCCAGGCGCGGTCCTTCGTGAAGGTCAAGGTCGAGACCGACAACG
TGATGTCGGTGGTGACCCTGTGGGGCCAGCCGTTCAGCCTCGGCTGA

Upstream 100 bases:

>100_bases
ACTCGAAGACCACGCTCTACGGCATGCCGTTCAGCATCGGCTGACCTTCCACGAACTTCACGAACCTCCAATCGCGTGAG
CGATTCAACCCTCGAAGGGT

Downstream 100 bases:

>100_bases
TCCGGTAGGACACATGGAACGGGCCCGTCACCCTCGGTGACGGGCCCGTTCGTCATGGGAAGCCCGGAACAGCTCGGCGC
GGCTTCAGAATTCGTGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKHMINRKNLARVAGVGAATAVAMGLFSTGAANADTFVPLPGGEITKTLSDGTVVTVRLVGESATISPSMGSTPVHRNAW
VSGSAQVEISGGGEDVGGKIYPGYVVGCQVNISGGGVEGGVEGSADWSGDTVTGGVGAESGGSLSLGPGQAASFYILDRE
VPDDYGNEDHATNNKFKGNSGSVTWADSTIGLSGCAGYAQARSFVKVKVETDNVMSVVTLWGQPFSLG

Sequences:

>Translated_228_residues
MKHMINRKNLARVAGVGAATAVAMGLFSTGAANADTFVPLPGGEITKTLSDGTVVTVRLVGESATISPSMGSTPVHRNAW
VSGSAQVEISGGGEDVGGKIYPGYVVGCQVNISGGGVEGGVEGSADWSGDTVTGGVGAESGGSLSLGPGQAASFYILDRE
VPDDYGNEDHATNNKFKGNSGSVTWADSTIGLSGCAGYAQARSFVKVKVETDNVMSVVTLWGQPFSLG
>Mature_228_residues
MKHMINRKNLARVAGVGAATAVAMGLFSTGAANADTFVPLPGGEITKTLSDGTVVTVRLVGESATISPSMGSTPVHRNAW
VSGSAQVEISGGGEDVGGKIYPGYVVGCQVNISGGGVEGGVEGSADWSGDTVTGGVGAESGGSLSLGPGQAASFYILDRE
VPDDYGNEDHATNNKFKGNSGSVTWADSTIGLSGCAGYAQARSFVKVKVETDNVMSVVTLWGQPFSLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22979; Mature: 22979

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHMINRKNLARVAGVGAATAVAMGLFSTGAANADTFVPLPGGEITKTLSDGTVVTVRLV
CCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCEEEEEEEE
GESATISPSMGSTPVHRNAWVSGSAQVEISGGGEDVGGKIYPGYVVGCQVNISGGGVEGG
CCCEEECCCCCCCCCCCCEEECCCEEEEECCCCCCCCCEECCCEEEEEEEEECCCCCCCC
VEGSADWSGDTVTGGVGAESGGSLSLGPGQAASFYILDREVPDDYGNEDHATNNKFKGNS
CCCCCCCCCCEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
GSVTWADSTIGLSGCAGYAQARSFVKVKVETDNVMSVVTLWGQPFSLG
CCEEEECCCCCCCCCCCHHHCCEEEEEEEECCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MKHMINRKNLARVAGVGAATAVAMGLFSTGAANADTFVPLPGGEITKTLSDGTVVTVRLV
CCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCEEEEEEEE
GESATISPSMGSTPVHRNAWVSGSAQVEISGGGEDVGGKIYPGYVVGCQVNISGGGVEGG
CCCEEECCCCCCCCCCCCEEECCCEEEEECCCCCCCCCEECCCEEEEEEEEECCCCCCCC
VEGSADWSGDTVTGGVGAESGGSLSLGPGQAASFYILDREVPDDYGNEDHATNNKFKGNS
CCCCCCCCCCEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
GSVTWADSTIGLSGCAGYAQARSFVKVKVETDNVMSVVTLWGQPFSLG
CCEEEECCCCCCCCCCCHHHCCEEEEEEEECCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA