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The map label for this gene is yabE [H]

Identifier: 54026878

GI number: 54026878

Start: 5118454

End: 5119581

Strand: Reverse

Name: yabE [H]

Synonym: nfa49040

Alternate gene names: 54026878

Gene position: 5119581-5118454 (Counterclockwise)

Preceding gene: 54026879

Following gene: 54026877

Centisome position: 85.03

GC content: 71.45

Gene sequence:

>1128_bases
ATGTCCCCCATCGCGAAGATCAACCGGTCACGCTCGCCGCTGCTGTACGCGGCGGTGGCGGCGTTGCTGCTGACGCTGAT
CGTGGGCGCTTCCATGGCCATCGTGAACCGCAAGACGGTCACCGTGGTGGTGGACGGCCAGCAGACGGTGCAGACCACCA
TGTCCCGCAACGTGGCGGGTGTGCTGCGCGCCGCGGGCTTCGAGGTGACCGACCGCGATCTGGTCCGTCCCGGCCTCGGG
GCGGCCGTGGTCGACGGCGCGACGATCGTGCTGAACCGGGCGCGCGAGGTGGCGCTCACCGTGGACGGCGCCGTGCGCAA
GGTCTGGACCACCGGTCTCACCGCGGGCGAGGCGCTCGAGCAGTTGAAGCTGCCCGCCGACGCCTACGTCTCGCCCGGCC
GGGACAAGCCGCTGCCGCTCAGCGGCGCCGCGCTGACCGTCGCCACGCCGCGCACCGTCTCGCTGCTCGACGGCGCGGGC
GCTCCGGTGGACGTGCGCCTGGCCGCGCCGACCGTCGGGGAATTCCTCTCCGTCGCCGGTGTGCCGCTGGTCGAGCAGGA
CACCGTCGAACCCGCCCCGGACACCCCGCTCGCGGACGGCCTGCGTGTGGTGGTCACCCGCAAGCGCATCGAAAAGCTCA
CCGAGACATTGCCGCTGGATCCGCCGGAGAACGTCATCGAGGATCCGACGATGAACATGAGCCGCACCGTGGTGGAGAGC
GAGGGCGTGCCGGGTGTGCACGACGTGACCTTCTCGATCACCAAGGTCAACGGTGCGGAGGTGGAGCGCACGCCGGTCGA
GTCGGTGGTGAAGGTGCCGGCCCAGCCCAAGACCGTCCGCAAGGGCGCCAAGCCGGGCACCGAGGTGCCTCCGGTGCGTG
ACGGCGCGATCTGGGACGCGCTGGCGCAGTGCGAATCCAACGGCAACTGGGCCATCAACACCGGCAACGGCTACTACGGC
GGCATCCAGTTCGACCAGAGCACCTGGGAACGGCAGGGCGGCCTGCGCTACGCCCCGCGCGCCGACCTGGCGACCCGCGA
GGAACAGATCGCCATCGCCGAGGTCACCCGCGCCCGCCAGGGCTGGGGAGCCTGGCCCGCCTGCACCAGCAGGCTCGGCC
TGAGCTGA

Upstream 100 bases:

>100_bases
CCTCTAGCAGGGCGGTCGATATCGAATCGTGATGTGGAACGCCGCTGATCGCGCGCCCGCGGTTGTTCCGCCGTGCCCGC
CTCGTTATGGTTCTGTGACC

Downstream 100 bases:

>100_bases
TCAGCGGGCCGGGGGCGGTAGTGGAGCGTGACCACGGAGGCCGCAGCGGGGCGCCATCCGTCGGGGGTGGCGCCCCGTTC
CGTGCCCGTGCCGGGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSPIAKINRSRSPLLYAAVAALLLTLIVGASMAIVNRKTVTVVVDGQQTVQTTMSRNVAGVLRAAGFEVTDRDLVRPGLG
AAVVDGATIVLNRAREVALTVDGAVRKVWTTGLTAGEALEQLKLPADAYVSPGRDKPLPLSGAALTVATPRTVSLLDGAG
APVDVRLAAPTVGEFLSVAGVPLVEQDTVEPAPDTPLADGLRVVVTRKRIEKLTETLPLDPPENVIEDPTMNMSRTVVES
EGVPGVHDVTFSITKVNGAEVERTPVESVVKVPAQPKTVRKGAKPGTEVPPVRDGAIWDALAQCESNGNWAINTGNGYYG
GIQFDQSTWERQGGLRYAPRADLATREEQIAIAEVTRARQGWGAWPACTSRLGLS

Sequences:

>Translated_375_residues
MSPIAKINRSRSPLLYAAVAALLLTLIVGASMAIVNRKTVTVVVDGQQTVQTTMSRNVAGVLRAAGFEVTDRDLVRPGLG
AAVVDGATIVLNRAREVALTVDGAVRKVWTTGLTAGEALEQLKLPADAYVSPGRDKPLPLSGAALTVATPRTVSLLDGAG
APVDVRLAAPTVGEFLSVAGVPLVEQDTVEPAPDTPLADGLRVVVTRKRIEKLTETLPLDPPENVIEDPTMNMSRTVVES
EGVPGVHDVTFSITKVNGAEVERTPVESVVKVPAQPKTVRKGAKPGTEVPPVRDGAIWDALAQCESNGNWAINTGNGYYG
GIQFDQSTWERQGGLRYAPRADLATREEQIAIAEVTRARQGWGAWPACTSRLGLS
>Mature_374_residues
SPIAKINRSRSPLLYAAVAALLLTLIVGASMAIVNRKTVTVVVDGQQTVQTTMSRNVAGVLRAAGFEVTDRDLVRPGLGA
AVVDGATIVLNRAREVALTVDGAVRKVWTTGLTAGEALEQLKLPADAYVSPGRDKPLPLSGAALTVATPRTVSLLDGAGA
PVDVRLAAPTVGEFLSVAGVPLVEQDTVEPAPDTPLADGLRVVVTRKRIEKLTETLPLDPPENVIEDPTMNMSRTVVESE
GVPGVHDVTFSITKVNGAEVERTPVESVVKVPAQPKTVRKGAKPGTEVPPVRDGAIWDALAQCESNGNWAINTGNGYYGG
IQFDQSTWERQGGLRYAPRADLATREEQIAIAEVTRARQGWGAWPACTSRLGLS

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 39599; Mature: 39467

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIAKINRSRSPLLYAAVAALLLTLIVGASMAIVNRKTVTVVVDGQQTVQTTMSRNVAG
CCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCHHHHHHHHHHHHHH
VLRAAGFEVTDRDLVRPGLGAAVVDGATIVLNRAREVALTVDGAVRKVWTTGLTAGEALE
HHHHCCCCCCCHHHHCCCCCCHHHCCCCEEEECCEEEEEEECHHHHHHHHHCCCHHHHHH
QLKLPADAYVSPGRDKPLPLSGAALTVATPRTVSLLDGAGAPVDVRLAAPTVGEFLSVAG
HHCCCHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEECCCHHHHHHHCC
VPLVEQDTVEPAPDTPLADGLRVVVTRKRIEKLTETLPLDPPENVIEDPTMNMSRTVVES
CCCCCCCCCCCCCCCCHHCCCEEEHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHEEEC
EGVPGVHDVTFSITKVNGAEVERTPVESVVKVPAQPKTVRKGAKPGTEVPPVRDGAIWDA
CCCCCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHH
LAQCESNGNWAINTGNGYYGGIQFDQSTWERQGGLRYAPRADLATREEQIAIAEVTRARQ
HHHHCCCCCEEEECCCCEECCEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GWGAWPACTSRLGLS
CCCCCHHHHHHCCCC
>Mature Secondary Structure 
SPIAKINRSRSPLLYAAVAALLLTLIVGASMAIVNRKTVTVVVDGQQTVQTTMSRNVAG
CCHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCHHHHHHHHHHHHHH
VLRAAGFEVTDRDLVRPGLGAAVVDGATIVLNRAREVALTVDGAVRKVWTTGLTAGEALE
HHHHCCCCCCCHHHHCCCCCCHHHCCCCEEEECCEEEEEEECHHHHHHHHHCCCHHHHHH
QLKLPADAYVSPGRDKPLPLSGAALTVATPRTVSLLDGAGAPVDVRLAAPTVGEFLSVAG
HHCCCHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEECCCHHHHHHHCC
VPLVEQDTVEPAPDTPLADGLRVVVTRKRIEKLTETLPLDPPENVIEDPTMNMSRTVVES
CCCCCCCCCCCCCCCCHHCCCEEEHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHEEEC
EGVPGVHDVTFSITKVNGAEVERTPVESVVKVPAQPKTVRKGAKPGTEVPPVRDGAIWDA
CCCCCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHH
LAQCESNGNWAINTGNGYYGGIQFDQSTWERQGGLRYAPRADLATREEQIAIAEVTRARQ
HHHHCCCCCEEEECCCCEECCEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GWGAWPACTSRLGLS
CCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]