| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026527
Identifier: 54026527
GI number: 54026527
Start: 4736049
End: 4736498
Strand: Reverse
Name: 54026527
Synonym: nfa45540
Alternate gene names: NA
Gene position: 4736498-4736049 (Counterclockwise)
Preceding gene: 54026528
Following gene: 54026521
Centisome position: 78.66
GC content: 71.78
Gene sequence:
>450_bases ATGAGCGTCACCACCTTCTTCTGGTTCGACTCGCAGGCCGAGCAGGCGGCCGCCACCTACGTCGGGCTGATCCCCGGCTC GCGCGTCATCGACGTGACCCGCAATCCCGACGGCTCGGCCTTCATCGTCACCCTGGAACTGGACGGGCACCCGGTCACCT TCATGAACGGCGGCCCCGGCCACCCCCAGACCGACGCCGCGTCCCTGCAGATCGTGGTCGACACGCAGGAGGAGGTCGAC CGCCTCTGGGACGCGCTGACCGACGGCGGCGCCCCCGGCCCCTGCGGCTGGCTCGTCGACCGCTACGGCATGCACTGGCA GGTCGTCCCCGCCGCCCTCCCCACCCTCCTGTCCGGCCCCGGCGCCCCCGCCGTCGCCACCGCCCTGCGCACCATGACCA AGATCGACCTGAAAGCCCTCCAGGACGCGGCCGCTCACGGAAACCGATGA
Upstream 100 bases:
>100_bases AAATTTCGCGGAGATGTGTCGAGGGCGCGGTGGTGGCTCCGACCGAAGGGTGACAGCACGGGCGGCACCGCCCACCCACC CTGATACGAGGAGCGACATC
Downstream 100 bases:
>100_bases GCGACGGAGTCACGAGGCGGACGTGGTGCGTCCGCCTCGGGCTCGGTGTCGCGCTCAGCCGAATCGTTACAGATCGGTGG TGGACCTAGCGGTCTCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; Signal Peptide; 3-Demethylubiquinone-93- Methyltransferase Protein; 3-Demethylubiquinone-9 3-Methyltransferase Family
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSVTTFFWFDSQAEQAAATYVGLIPGSRVIDVTRNPDGSAFIVTLELDGHPVTFMNGGPGHPQTDAASLQIVVDTQEEVD RLWDALTDGGAPGPCGWLVDRYGMHWQVVPAALPTLLSGPGAPAVATALRTMTKIDLKALQDAAAHGNR
Sequences:
>Translated_149_residues MSVTTFFWFDSQAEQAAATYVGLIPGSRVIDVTRNPDGSAFIVTLELDGHPVTFMNGGPGHPQTDAASLQIVVDTQEEVD RLWDALTDGGAPGPCGWLVDRYGMHWQVVPAALPTLLSGPGAPAVATALRTMTKIDLKALQDAAAHGNR >Mature_148_residues SVTTFFWFDSQAEQAAATYVGLIPGSRVIDVTRNPDGSAFIVTLELDGHPVTFMNGGPGHPQTDAASLQIVVDTQEEVDR LWDALTDGGAPGPCGWLVDRYGMHWQVVPAALPTLLSGPGAPAVATALRTMTKIDLKALQDAAAHGNR
Specific function: Unknown
COG id: COG3865
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15769; Mature: 15638
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTTFFWFDSQAEQAAATYVGLIPGSRVIDVTRNPDGSAFIVTLELDGHPVTFMNGGPG CCEEEEEEECCCCHHHHHEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEECCCCC HPQTDAASLQIVVDTQEEVDRLWDALTDGGAPGPCGWLVDRYGMHWQVVPAALPTLLSGP CCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHCCC GAPAVATALRTMTKIDLKALQDAAAHGNR CCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVTTFFWFDSQAEQAAATYVGLIPGSRVIDVTRNPDGSAFIVTLELDGHPVTFMNGGPG CEEEEEEECCCCHHHHHEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEECCCCC HPQTDAASLQIVVDTQEEVDRLWDALTDGGAPGPCGWLVDRYGMHWQVVPAALPTLLSGP CCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHCCC GAPAVATALRTMTKIDLKALQDAAAHGNR CCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA