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The map label for this gene is 54026521

Identifier: 54026521

GI number: 54026521

Start: 4726036

End: 4726860

Strand: Reverse

Name: 54026521

Synonym: nfa45480

Alternate gene names: NA

Gene position: 4726860-4726036 (Counterclockwise)

Preceding gene: 54026527

Following gene: 54026520

Centisome position: 78.5

GC content: 70.55

Gene sequence:

>825_bases
GTGGCACACAAGTCGATCGATGCCGGACCCGGAGATCTGCTGCGCCCGCCGAGCTTCGGCGGCCTGCTGCGCAAGCTGCG
TGACGAGCGCCGTATTTCCCGGGAAAAGCTGGCATTCGCGGCCGGGGTGAGCGCCAGCTACATCACCCACCTGGAGGGCG
GCGACCGCGAGCACCCCACCAAGGCGGTGGTGGAGGCGCTGGTCGGCTACCTGGACCGGATCAGCCCGCTCACCGCCGCC
GAACGCCGCCACCTCTACGACCTGGCCGGCCTGTCCGAGGACGCCTACCCCAGCGTGGAGGAACTGCGCGCCGACATCGG
CGAGGCCACCAGGGCCGCCCTGGCCGTGCACGAGCCGAACCCCGCCGCCTACCTCGACACCCGCTGGAACCTCTTGTATT
GCAACGACACCTACGCGGCCACCTTTCCCGGGCTGGCCGAGGACGTGAACATCCTGCACTGGCTGTTCGGCAACGAGATC
TCCCGGCAGGTGCTGGTCGAATGGCAGCGGGAAGCCGTGCTGACGGTGGAGTGGTTGCGCGGCCTCATCGGGCAGTCCGG
GGACACGCGGTGGTCCGCCGACCTGCTGGCCGACCTCGGCCGGTTCCCGGAGTTCCGCGCCATCTGGGCCGCGGGCGGCA
CCGTCTACGGCCGCGACAGCCCGGACATGCACCTGCGTGACGTACGGACCGGCGAGTGCTTCACCCTCGCCGTGCAGATG
TTCCGGCTGGATTCGGGCAGCCATCCCGGCCGGGTGCAGTTCTTCCTCGGCATCCGCAACGCCTGCCCGAACACCGGCGC
GCCGCATCCCGCCGCGGCCGGTTAG

Upstream 100 bases:

>100_bases
CGTCTGATTCGAGTGGCCGCGATTCCCGTCGCGCGGCGGGCCTGCCGGGTGGAGCAACGCACAACACGATACGTCTACGG
TCCTCGAGGAGTGGATTGCT

Downstream 100 bases:

>100_bases
CTCGCCGCCGCCGTTCCGATACCTATTCGTTACCCGGCAATTGCGCAGCACAGAGGCGGTTTCCGTGCCGGATCACAGGA
AACCCGGGCGCGGATCGCAC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MAHKSIDAGPGDLLRPPSFGGLLRKLRDERRISREKLAFAAGVSASYITHLEGGDREHPTKAVVEALVGYLDRISPLTAA
ERRHLYDLAGLSEDAYPSVEELRADIGEATRAALAVHEPNPAAYLDTRWNLLYCNDTYAATFPGLAEDVNILHWLFGNEI
SRQVLVEWQREAVLTVEWLRGLIGQSGDTRWSADLLADLGRFPEFRAIWAAGGTVYGRDSPDMHLRDVRTGECFTLAVQM
FRLDSGSHPGRVQFFLGIRNACPNTGAPHPAAAG

Sequences:

>Translated_274_residues
MAHKSIDAGPGDLLRPPSFGGLLRKLRDERRISREKLAFAAGVSASYITHLEGGDREHPTKAVVEALVGYLDRISPLTAA
ERRHLYDLAGLSEDAYPSVEELRADIGEATRAALAVHEPNPAAYLDTRWNLLYCNDTYAATFPGLAEDVNILHWLFGNEI
SRQVLVEWQREAVLTVEWLRGLIGQSGDTRWSADLLADLGRFPEFRAIWAAGGTVYGRDSPDMHLRDVRTGECFTLAVQM
FRLDSGSHPGRVQFFLGIRNACPNTGAPHPAAAG
>Mature_273_residues
AHKSIDAGPGDLLRPPSFGGLLRKLRDERRISREKLAFAAGVSASYITHLEGGDREHPTKAVVEALVGYLDRISPLTAAE
RRHLYDLAGLSEDAYPSVEELRADIGEATRAALAVHEPNPAAYLDTRWNLLYCNDTYAATFPGLAEDVNILHWLFGNEIS
RQVLVEWQREAVLTVEWLRGLIGQSGDTRWSADLLADLGRFPEFRAIWAAGGTVYGRDSPDMHLRDVRTGECFTLAVQMF
RLDSGSHPGRVQFFLGIRNACPNTGAPHPAAAG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30175; Mature: 30044

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHKSIDAGPGDLLRPPSFGGLLRKLRDERRISREKLAFAAGVSASYITHLEGGDREHPT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCHH
KAVVEALVGYLDRISPLTAAERRHLYDLAGLSEDAYPSVEELRADIGEATRAALAVHEPN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEECCC
PAAYLDTRWNLLYCNDTYAATFPGLAEDVNILHWLFGNEISRQVLVEWQREAVLTVEWLR
CCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GLIGQSGDTRWSADLLADLGRFPEFRAIWAAGGTVYGRDSPDMHLRDVRTGECFTLAVQM
HHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCEEECCCCCCHHHHHHHH
FRLDSGSHPGRVQFFLGIRNACPNTGAPHPAAAG
HHHCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHKSIDAGPGDLLRPPSFGGLLRKLRDERRISREKLAFAAGVSASYITHLEGGDREHPT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCHH
KAVVEALVGYLDRISPLTAAERRHLYDLAGLSEDAYPSVEELRADIGEATRAALAVHEPN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEECCC
PAAYLDTRWNLLYCNDTYAATFPGLAEDVNILHWLFGNEISRQVLVEWQREAVLTVEWLR
CCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GLIGQSGDTRWSADLLADLGRFPEFRAIWAAGGTVYGRDSPDMHLRDVRTGECFTLAVQM
HHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCEEECCCCCCHHHHHHHH
FRLDSGSHPGRVQFFLGIRNACPNTGAPHPAAAG
HHHCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA