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The map label for this gene is 54026528

Identifier: 54026528

GI number: 54026528

Start: 4736619

End: 4736951

Strand: Reverse

Name: 54026528

Synonym: nfa45550

Alternate gene names: NA

Gene position: 4736951-4736619 (Counterclockwise)

Preceding gene: 54026529

Following gene: 54026527

Centisome position: 78.67

GC content: 75.08

Gene sequence:

>333_bases
ATGCCTTTCGATCCCGATCTCGCCGAGCGGCTGCGCGCCGTGCTCGCGGGCACGCCCGCCCTGGCCGAGAAACGCATGTT
CGGCGGTCTGGCCTTCCTCGTCGGCGGCAACCTGGCGGTCGCGGCCAGCCACGACGGCGGTCTGCTGGTGCGGGTCGACC
CCGCCGAGGGGGAGCGCCTCCTCGACGACCGGCGCGTCGTGCCGATGGTGATGGGCGGGCGCGAGATGCGGGGCTGGCTG
CGGGTCGCGCCCGCCGCCGTCGACACCGACGCGGCCCTGCGGGCCTGGGTCGACCGCGGTGTGTTCTACGCGCGATCCCT
GCCCCCGAAGTAG

Upstream 100 bases:

>100_bases
CGGCACCCATTCATGGCCGTACTGGCAGGACGACCTGCACGACTCCTGGCCGATGTTCGCCGCCGCCATCGGCGCCTGAC
CACACCGCGCAAGGATTCCC

Downstream 100 bases:

>100_bases
CCGCGAGACGATCGTCGAGAAAATTTCGCGGAGATGTGTCGAGGGCGCGGTGGTGGCTCCGACCGAAGGGTGACAGCACG
GGCGGCACCGCCCACCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: Cold-Shock Domain Family Protein-Related Protein

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MPFDPDLAERLRAVLAGTPALAEKRMFGGLAFLVGGNLAVAASHDGGLLVRVDPAEGERLLDDRRVVPMVMGGREMRGWL
RVAPAAVDTDAALRAWVDRGVFYARSLPPK

Sequences:

>Translated_110_residues
MPFDPDLAERLRAVLAGTPALAEKRMFGGLAFLVGGNLAVAASHDGGLLVRVDPAEGERLLDDRRVVPMVMGGREMRGWL
RVAPAAVDTDAALRAWVDRGVFYARSLPPK
>Mature_109_residues
PFDPDLAERLRAVLAGTPALAEKRMFGGLAFLVGGNLAVAASHDGGLLVRVDPAEGERLLDDRRVVPMVMGGREMRGWLR
VAPAAVDTDAALRAWVDRGVFYARSLPPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11838; Mature: 11707

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFDPDLAERLRAVLAGTPALAEKRMFGGLAFLVGGNLAVAASHDGGLLVRVDPAEGERL
CCCCHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCEEEEEECCCCEEEEECCCCCCHH
LDDRRVVPMVMGGREMRGWLRVAPAAVDTDAALRAWVDRGVFYARSLPPK
HCCCCEEEEEECCHHHCCCEEECCCCCCCHHHHHHHHHCCEEEECCCCCC
>Mature Secondary Structure 
PFDPDLAERLRAVLAGTPALAEKRMFGGLAFLVGGNLAVAASHDGGLLVRVDPAEGERL
CCCHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCEEEEEECCCCEEEEECCCCCCHH
LDDRRVVPMVMGGREMRGWLRVAPAAVDTDAALRAWVDRGVFYARSLPPK
HCCCCEEEEEECCHHHCCCEEECCCCCCCHHHHHHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA