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The map label for this gene is ygcJ [H]

Identifier: 54026398

GI number: 54026398

Start: 4587266

End: 4588432

Strand: Reverse

Name: ygcJ [H]

Synonym: nfa44250

Alternate gene names: 54026398

Gene position: 4588432-4587266 (Counterclockwise)

Preceding gene: 54026399

Following gene: 54026397

Centisome position: 76.2

GC content: 64.52

Gene sequence:

>1167_bases
GTGACCAGGCTTTTCATCGATGTCCACATCCTGCAGACCGTGCCTCCCAGCAACGTGAACCGCGACGACACGGGTAGTCC
GAAAACCGCCGTCTACGGGGGAGTGCGCCGCGCCCGGGTGTCCAGTCAGGCATGGAAGCGGGCCACCAGGACCGAGTTCC
GCAGCCTCGTCGATCCCGCCGGCCTCGGTGTTCGTACGAAGCGAGTCGTCGAACTCATCGCCGAACGGATCGGGGAGATC
GATCTCATCGCCGAACGGATCGGGGAGATCGATCACGACCGAGCGGTCTTTCGCGAGCCCGACGAGCGCGTCGCTGCCGC
AGCTCAGGTGCTCAAGGACGCCGGAATCGCATTGGAGAAGCCGAAAAAGCGCAAAGATGAAGTGGTCGATCCGGTGGAGC
AGTCGAAGTACTTGCTCTTCCTGAGTGCCACGCAAATCGACCGACTCGCCGAACTGGCCATCGCCGCCAAGGGTGGCGCG
ACCGACAAGGGAGCGGCCAAAGCCGCGGCGAAGGGAGCAGACAGTATCGACGTGGCGCTGTTCGGACGAATGGTTGCCGA
TGACGCGAATCTCAATGTCGACGCCGCTGCTCAAGTCGCCCACGCGATCAGCGTGCACGGGGTGAACAACGAATTCGACT
ACTACACAGCGGTCGACGACCGATCTCCGGAGGACAACGCCGGCGCCGGCATGATCGGTGTCGTCGAATTCAACTCCTCC
ACCCTGTACCGCTACGCCACCGTCAACCTCGGGATGCTCGAGAAGAACCTGGGTGATTCCAAGGCCACTGTGCTCGCCGT
CGAGGCGTTCGCGAAGGCGTTCGTCCGCAGCATGCCCAGCGGCAAGCAGAACACCTTCGCCCATCGCACGCTGCCCGATG
CGGTCGTGTTCAGCCTCCGCGAGGATCAACCGGTCAACCTGGTCACCGCGTTCGAAGAGCCCGTGAACGCGGTGGGGGCG
GCCCGGTCGGTCGCGGCAGCCAAAGCGCTCGTCGCCCGCTACTCCGCGATCGAGTCCTCCTTCGGCGACGGTGCGACACG
GAATTTCGTCGTCGCCACCGGCGACGGAGCCGACACGCTCAGCGCCATCGCCGAACCGGTGTCCTTCGCCGAAGCTGTCG
AAGGAGTGGTCGACAGCGTGCGGGCCGCACTGGGTGTGTCGTCGTGA

Upstream 100 bases:

>100_bases
ACGCCGATCGAGTGCTACTCGCGTGGGGCCGCGACTACCACCGCTCGCCCAAGGCGGGCCCGACTTCCGACGATGACACC
CCTGCGACAGGAGACCAGCA

Downstream 100 bases:

>100_bases
CCGTGCTGTTGCTACGACTGGCCGCCCCCTTGCAATCCTGGGGTGTCGCCAGCCGGTTCGCACGCAGGGAAACCCAGCAG
TATCCGTCGAAGAGCGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTRLFIDVHILQTVPPSNVNRDDTGSPKTAVYGGVRRARVSSQAWKRATRTEFRSLVDPAGLGVRTKRVVELIAERIGEI
DLIAERIGEIDHDRAVFREPDERVAAAAQVLKDAGIALEKPKKRKDEVVDPVEQSKYLLFLSATQIDRLAELAIAAKGGA
TDKGAAKAAAKGADSIDVALFGRMVADDANLNVDAAAQVAHAISVHGVNNEFDYYTAVDDRSPEDNAGAGMIGVVEFNSS
TLYRYATVNLGMLEKNLGDSKATVLAVEAFAKAFVRSMPSGKQNTFAHRTLPDAVVFSLREDQPVNLVTAFEEPVNAVGA
ARSVAAAKALVARYSAIESSFGDGATRNFVVATGDGADTLSAIAEPVSFAEAVEGVVDSVRAALGVSS

Sequences:

>Translated_388_residues
MTRLFIDVHILQTVPPSNVNRDDTGSPKTAVYGGVRRARVSSQAWKRATRTEFRSLVDPAGLGVRTKRVVELIAERIGEI
DLIAERIGEIDHDRAVFREPDERVAAAAQVLKDAGIALEKPKKRKDEVVDPVEQSKYLLFLSATQIDRLAELAIAAKGGA
TDKGAAKAAAKGADSIDVALFGRMVADDANLNVDAAAQVAHAISVHGVNNEFDYYTAVDDRSPEDNAGAGMIGVVEFNSS
TLYRYATVNLGMLEKNLGDSKATVLAVEAFAKAFVRSMPSGKQNTFAHRTLPDAVVFSLREDQPVNLVTAFEEPVNAVGA
ARSVAAAKALVARYSAIESSFGDGATRNFVVATGDGADTLSAIAEPVSFAEAVEGVVDSVRAALGVSS
>Mature_387_residues
TRLFIDVHILQTVPPSNVNRDDTGSPKTAVYGGVRRARVSSQAWKRATRTEFRSLVDPAGLGVRTKRVVELIAERIGEID
LIAERIGEIDHDRAVFREPDERVAAAAQVLKDAGIALEKPKKRKDEVVDPVEQSKYLLFLSATQIDRLAELAIAAKGGAT
DKGAAKAAAKGADSIDVALFGRMVADDANLNVDAAAQVAHAISVHGVNNEFDYYTAVDDRSPEDNAGAGMIGVVEFNSST
LYRYATVNLGMLEKNLGDSKATVLAVEAFAKAFVRSMPSGKQNTFAHRTLPDAVVFSLREDQPVNLVTAFEEPVNAVGAA
RSVAAAKALVARYSAIESSFGDGATRNFVVATGDGADTLSAIAEPVSFAEAVEGVVDSVRAALGVSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=326, Percent_Identity=29.4478527607362, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 41143; Mature: 41011

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLFIDVHILQTVPPSNVNRDDTGSPKTAVYGGVRRARVSSQAWKRATRTEFRSLVDPA
CCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
GLGVRTKRVVELIAERIGEIDLIAERIGEIDHDRAVFREPDERVAAAAQVLKDAGIALEK
CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCC
PKKRKDEVVDPVEQSKYLLFLSATQIDRLAELAIAAKGGATDKGAAKAAAKGADSIDVAL
CCHHHHHHCCCHHCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHH
FGRMVADDANLNVDAAAQVAHAISVHGVNNEFDYYTAVDDRSPEDNAGAGMIGVVEFNSS
HHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCC
TLYRYATVNLGMLEKNLGDSKATVLAVEAFAKAFVRSMPSGKQNTFAHRTLPDAVVFSLR
EEEEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHEEEC
EDQPVNLVTAFEEPVNAVGAARSVAAAKALVARYSAIESSFGDGATRNFVVATGDGADTL
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHH
SAIAEPVSFAEAVEGVVDSVRAALGVSS
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRLFIDVHILQTVPPSNVNRDDTGSPKTAVYGGVRRARVSSQAWKRATRTEFRSLVDPA
CEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
GLGVRTKRVVELIAERIGEIDLIAERIGEIDHDRAVFREPDERVAAAAQVLKDAGIALEK
CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCC
PKKRKDEVVDPVEQSKYLLFLSATQIDRLAELAIAAKGGATDKGAAKAAAKGADSIDVAL
CCHHHHHHCCCHHCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHH
FGRMVADDANLNVDAAAQVAHAISVHGVNNEFDYYTAVDDRSPEDNAGAGMIGVVEFNSS
HHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCC
TLYRYATVNLGMLEKNLGDSKATVLAVEAFAKAFVRSMPSGKQNTFAHRTLPDAVVFSLR
EEEEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHEEEC
EDQPVNLVTAFEEPVNAVGAARSVAAAKALVARYSAIESSFGDGATRNFVVATGDGADTL
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHH
SAIAEPVSFAEAVEGVVDSVRAALGVSS
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]