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The map label for this gene is ygcI [C]

Identifier: 54026397

GI number: 54026397

Start: 4586562

End: 4587269

Strand: Reverse

Name: ygcI [C]

Synonym: nfa44240

Alternate gene names: 54026397

Gene position: 4587269-4586562 (Counterclockwise)

Preceding gene: 54026398

Following gene: 54026396

Centisome position: 76.18

GC content: 64.97

Gene sequence:

>708_bases
GTGACCGTGCTGTTGCTACGACTGGCCGCCCCCTTGCAATCCTGGGGTGTCGCCAGCCGGTTCGCACGCAGGGAAACCCA
GCAGTATCCGTCGAAGAGCGGCATTCTCGGACTCATCGCCGCGGCCCGCGGACACCGTCGCACCGATCCGATCGAAGAAG
CGCTGCAGAACCTGGCCTTCGGAGTGCGGGTGGATCAGCCGGGCCGGTTGATCCGCGATTTTCAGGTCGCCCTGAACATC
GACAAGACCAAGCAGTTTCCGCTGTCTCAGCGCTACTACCTGGCCGACGCTGTGTTTCTCGCCGCGATTCAAGGTGAGCG
CGGTCTGATCGAGGGAATCGGAAATGCGCTGCGGCGTCCGGAGTTTCCACTGTACCTGGGTAGGCGCTCCTGTCCGGTGA
CAGGGCCGCTCGTTCTCGGCGAGCCCCGCGACGTCACGTTGGAACACGCCCTGCACGAAACCGAATGGCAGGCCGCGACG
TGGTATCGACGTTCGCAGCATCGACGCGTCCGGCTGCCGATCTATCGCGACCTCCTGCCCGGCGATCCCGTGGAACTCCT
GCGTGAGCAGGTTCGCGACATGCCACTCAGCTTCGATCCGGTCCGTCGCGAGTACGGCTGGCGCACTGTCGTGGAGGACT
ACACCACGATGCTGAACGCGGAGGGCCGCATCGGACACGAGCCGCTCGCGGCCCTGGGAGGTGACTGA

Upstream 100 bases:

>100_bases
ACGGAGCCGACACGCTCAGCGCCATCGCCGAACCGGTGTCCTTCGCCGAAGCTGTCGAAGGAGTGGTCGACAGCGTGCGG
GCCGCACTGGGTGTGTCGTC

Downstream 100 bases:

>100_bases
TGTTCCTGTCCCGCGTCCCGCTGAACCCTGCCCGGCAGGGAACCAGGAAACTCCTGTCCTCGCCCCAGGCAGCGCATGCC
GCTGTGCTGGCCGCCTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Family; CRISPR-Associated Protein; CRISPR-Associated Cas5e Family Protein; Cas5 Family CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Protein Cas5e Family; Complete Genome; Crispr-Associated Family Protein; CRISPR-Associated Protein Cas5e-Type; CRISPR-Associated Cas5 Family Ecoli Subtype Protein; CRISPR-Associated Cse5e Family Protein; CRISPR-Associated Protein CT; CRISPR-Associated Subtype; CRISPR-Associated Ecoli Subtype

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTVLLLRLAAPLQSWGVASRFARRETQQYPSKSGILGLIAAARGHRRTDPIEEALQNLAFGVRVDQPGRLIRDFQVALNI
DKTKQFPLSQRYYLADAVFLAAIQGERGLIEGIGNALRRPEFPLYLGRRSCPVTGPLVLGEPRDVTLEHALHETEWQAAT
WYRRSQHRRVRLPIYRDLLPGDPVELLREQVRDMPLSFDPVRREYGWRTVVEDYTTMLNAEGRIGHEPLAALGGD

Sequences:

>Translated_235_residues
MTVLLLRLAAPLQSWGVASRFARRETQQYPSKSGILGLIAAARGHRRTDPIEEALQNLAFGVRVDQPGRLIRDFQVALNI
DKTKQFPLSQRYYLADAVFLAAIQGERGLIEGIGNALRRPEFPLYLGRRSCPVTGPLVLGEPRDVTLEHALHETEWQAAT
WYRRSQHRRVRLPIYRDLLPGDPVELLREQVRDMPLSFDPVRREYGWRTVVEDYTTMLNAEGRIGHEPLAALGGD
>Mature_234_residues
TVLLLRLAAPLQSWGVASRFARRETQQYPSKSGILGLIAAARGHRRTDPIEEALQNLAFGVRVDQPGRLIRDFQVALNID
KTKQFPLSQRYYLADAVFLAAIQGERGLIEGIGNALRRPEFPLYLGRRSCPVTGPLVLGEPRDVTLEHALHETEWQAATW
YRRSQHRRVRLPIYRDLLPGDPVELLREQVRDMPLSFDPVRREYGWRTVVEDYTTMLNAEGRIGHEPLAALGGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082154, Length=158, Percent_Identity=32.9113924050633, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26702; Mature: 26571

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLLLRLAAPLQSWGVASRFARRETQQYPSKSGILGLIAAARGHRRTDPIEEALQNLAF
CEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
GVRVDQPGRLIRDFQVALNIDKTKQFPLSQRYYLADAVFLAAIQGERGLIEGIGNALRRP
CEEECCCCHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
EFPLYLGRRSCPVTGPLVLGEPRDVTLEHALHETEWQAATWYRRSQHRRVRLPIYRDLLP
CCCEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHCCC
GDPVELLREQVRDMPLSFDPVRREYGWRTVVEDYTTMLNAEGRIGHEPLAALGGD
CCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
>Mature Secondary Structure 
TVLLLRLAAPLQSWGVASRFARRETQQYPSKSGILGLIAAARGHRRTDPIEEALQNLAF
EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
GVRVDQPGRLIRDFQVALNIDKTKQFPLSQRYYLADAVFLAAIQGERGLIEGIGNALRRP
CEEECCCCHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
EFPLYLGRRSCPVTGPLVLGEPRDVTLEHALHETEWQAATWYRRSQHRRVRLPIYRDLLP
CCCEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHCCC
GDPVELLREQVRDMPLSFDPVRREYGWRTVVEDYTTMLNAEGRIGHEPLAALGGD
CCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA