| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026390
Identifier: 54026390
GI number: 54026390
Start: 4579202
End: 4579651
Strand: Reverse
Name: 54026390
Synonym: nfa44170
Alternate gene names: NA
Gene position: 4579651-4579202 (Counterclockwise)
Preceding gene: 54026391
Following gene: 54026388
Centisome position: 76.06
GC content: 70.44
Gene sequence:
>450_bases TTGCGGCGGGGTCGTGTCGAGCCCGGCGGCGTTAGCCTTGGTACTTCGCCAGAGCAGGAGCCTCGAGCAAGGAGGGCCGC CATGCGCGGACGGTTTACCGGATTCGCCGCTGCTTCGGCCTGCGCGGCGTTGTTGGTTCTTCCCGGCCTGGGTGCGGCGT TCTCGGCGCCCGGTCTCCCGGTCGAGCGCGCTGTCCTCGCCCAGCCGGATCAGTATCCGCCGCCCGACACGGGGCCGTAT GTGCTGCAGTGCCTTCCGGGTGGGATGGCCATGTGGAGCAACGGGGTCACCGGATTCTCCGAATGGTGCTTGAACGGCAA CGGAAGCCCGCACGGTCCGGACGGCTACGGGCCGTTGGGGCCGGTGGAGCCGGGTACGCCCGGTGGGCCGGCGATGCCGG GAGAGCCGCAGATGCCGGATGGGCCGATAGGGCCGGAACGGCCGATGTAG
Upstream 100 bases:
>100_bases GGCGTGAGGGTTGCGCGCCGACCCACACGGGCTTGCGGAGGCGGCCGCGTCGAATAGGTAACGACTGCATACACCTCACC CCCCGGAGATAGCTATCTGA
Downstream 100 bases:
>100_bases GAGGTGCGTCGCCCGTGTGAGCGCCCGCGATCAGGTGAAATCGGGCACAGCCGGAGGGGCGCGCCACCCTTCGCCCCGGC CGTGCCGGCACACGCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRRGRVEPGGVSLGTSPEQEPRARRAAMRGRFTGFAAASACAALLVLPGLGAAFSAPGLPVERAVLAQPDQYPPPDTGPY VLQCLPGGMAMWSNGVTGFSEWCLNGNGSPHGPDGYGPLGPVEPGTPGGPAMPGEPQMPDGPIGPERPM
Sequences:
>Translated_149_residues MRRGRVEPGGVSLGTSPEQEPRARRAAMRGRFTGFAAASACAALLVLPGLGAAFSAPGLPVERAVLAQPDQYPPPDTGPY VLQCLPGGMAMWSNGVTGFSEWCLNGNGSPHGPDGYGPLGPVEPGTPGGPAMPGEPQMPDGPIGPERPM >Mature_149_residues MRRGRVEPGGVSLGTSPEQEPRARRAAMRGRFTGFAAASACAALLVLPGLGAAFSAPGLPVERAVLAQPDQYPPPDTGPY VLQCLPGGMAMWSNGVTGFSEWCLNGNGSPHGPDGYGPLGPVEPGTPGGPAMPGEPQMPDGPIGPERPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15186; Mature: 15186
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGRVEPGGVSLGTSPEQEPRARRAAMRGRFTGFAAASACAALLVLPGLGAAFSAPGLP CCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC VERAVLAQPDQYPPPDTGPYVLQCLPGGMAMWSNGVTGFSEWCLNGNGSPHGPDGYGPLG CHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCC PVEPGTPGGPAMPGEPQMPDGPIGPERPM CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRGRVEPGGVSLGTSPEQEPRARRAAMRGRFTGFAAASACAALLVLPGLGAAFSAPGLP CCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC VERAVLAQPDQYPPPDTGPYVLQCLPGGMAMWSNGVTGFSEWCLNGNGSPHGPDGYGPLG CHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCC PVEPGTPGGPAMPGEPQMPDGPIGPERPM CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA