| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026388
Identifier: 54026388
GI number: 54026388
Start: 4575954
End: 4576370
Strand: Reverse
Name: 54026388
Synonym: nfa44150
Alternate gene names: NA
Gene position: 4576370-4575954 (Counterclockwise)
Preceding gene: 54026390
Following gene: 54026387
Centisome position: 76.0
GC content: 69.54
Gene sequence:
>417_bases ATGAGCGACGCGAGCGGGTTCGATCCGCGGGCGGAAGTCGAGGCGGTGCACCGCCTGCTGGCCACCTGGCTGGGGACCGA CGCGGACCCGCAGGTGCTGGACGATTTCCTCGCCACCCAGCACGAGGACTTCTCGATGGTGACCGTCGGCGGCGCGGTGC TGGGCAAGAAGGAGTTACGGGACGGGTTGCGTGACGCGCGAAACAGTGTGCCCGGCTTGGTGATCGAGATCTCCGAGCTC GAAATGGTCTGGCATGCGGGCGGCCTGGTGGTTGTCCGGTTCGTGGAGGGGCATCGGAGCGGTGGCGCGGTGGAGTTCCG GCGCACCACCGCTGTCCTGGCCGCCGATCCGGGACGGCGGGATCGGTGGCTGGCACTGCAGGAAACCGCGATCGCGCCGC GGGCGGATCGCGCATGA
Upstream 100 bases:
>100_bases CCCCACTTCTCGATTCCCCGCTGATTCCGCCAGATTTTCTGGGCCCGGGTCGGTGCGTGCTCGGACGGCTATCCTGCACT GCATGAGCGACCTGCACTGC
Downstream 100 bases:
>100_bases TCGGCGGGGGATCAATTCGCGTGAGACAAGCTGTGCGCCTCGGTATTCCGGTACTCGTCGCGACGATGATCGCCGCCGGC CCCGGCCTCGCGACCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSDASGFDPRAEVEAVHRLLATWLGTDADPQVLDDFLATQHEDFSMVTVGGAVLGKKELRDGLRDARNSVPGLVIEISEL EMVWHAGGLVVVRFVEGHRSGGAVEFRRTTAVLAADPGRRDRWLALQETAIAPRADRA
Sequences:
>Translated_138_residues MSDASGFDPRAEVEAVHRLLATWLGTDADPQVLDDFLATQHEDFSMVTVGGAVLGKKELRDGLRDARNSVPGLVIEISEL EMVWHAGGLVVVRFVEGHRSGGAVEFRRTTAVLAADPGRRDRWLALQETAIAPRADRA >Mature_137_residues SDASGFDPRAEVEAVHRLLATWLGTDADPQVLDDFLATQHEDFSMVTVGGAVLGKKELRDGLRDARNSVPGLVIEISELE MVWHAGGLVVVRFVEGHRSGGAVEFRRTTAVLAADPGRRDRWLALQETAIAPRADRA
Specific function: Unknown
COG id: COG4460
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15016; Mature: 14885
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDASGFDPRAEVEAVHRLLATWLGTDADPQVLDDFLATQHEDFSMVTVGGAVLGKKELR CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCHHHHH DGLRDARNSVPGLVIEISELEMVWHAGGLVVVRFVEGHRSGGAVEFRRTTAVLAADPGRR HHHHHHHHCCCCEEEEHHHHHEEHCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCC DRWLALQETAIAPRADRA CCEEEEHHHCCCCCCCCC >Mature Secondary Structure SDASGFDPRAEVEAVHRLLATWLGTDADPQVLDDFLATQHEDFSMVTVGGAVLGKKELR CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCHHHHH DGLRDARNSVPGLVIEISELEMVWHAGGLVVVRFVEGHRSGGAVEFRRTTAVLAADPGRR HHHHHHHHCCCCEEEEHHHHHEEHCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCC DRWLALQETAIAPRADRA CCEEEEHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA