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The map label for this gene is gatC

Identifier: 54026230

GI number: 54026230

Start: 4413099

End: 4413398

Strand: Reverse

Name: gatC

Synonym: nfa42590

Alternate gene names: 54026230

Gene position: 4413398-4413099 (Counterclockwise)

Preceding gene: 54026232

Following gene: 54026229

Centisome position: 73.3

GC content: 72.0

Gene sequence:

>300_bases
GTGCCCGCCATCTCCCGCGACGAGGTCGCACACCTCGCCCGGCTGTCCCGGCTCGCGCTGTCCGATGCCGAACTGGACCA
GTTCGCCGGTCAGCTGGATTCGATCCTGAGCCACGTGCGGACCATCTCCGAGGTCGCCGCCGCCGACGTCCCCGCCACCG
CTTCGCCCGACCCGGTGACCAACGTGACCCGCCCCGACACCGTGGTGCCCGGCCTGACGCCGGACCAGGCGCTGGCCGCC
GCGCCGGCGGTCGAGGAGCAGCGGTTCATGGTTCCGCAGATTCTGGGAGAGGGCGAATGA

Upstream 100 bases:

>100_bases
TCGACGAGCCCGGGAGGCTGCGATGTCGGGCCGCTGGGCGGGGTCGGTAGGGTATTGCCTGGCCGATCCACACGCTCTTC
ACGCCGAAAGGGGTCCCGCG

Downstream 100 bases:

>100_bases
GCGACCTGACCACCCGCACCGCGGCCGAACTCGCGCAGCAGATCCACGCGCGCGAGATCAGCTCCGTCGAGGTCACCCAG
GCCCACCTGGACCGCATCGC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MPAISRDEVAHLARLSRLALSDAELDQFAGQLDSILSHVRTISEVAAADVPATASPDPVTNVTRPDTVVPGLTPDQALAA
APAVEEQRFMVPQILGEGE

Sequences:

>Translated_99_residues
MPAISRDEVAHLARLSRLALSDAELDQFAGQLDSILSHVRTISEVAAADVPATASPDPVTNVTRPDTVVPGLTPDQALAA
APAVEEQRFMVPQILGEGE
>Mature_98_residues
PAISRDEVAHLARLSRLALSDAELDQFAGQLDSILSHVRTISEVAAADVPATASPDPVTNVTRPDTVVPGLTPDQALAAA
PAVEEQRFMVPQILGEGE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_NOCFA (Q5YRT3)

Other databases:

- EMBL:   AP006618
- RefSeq:   YP_120472.1
- ProteinModelPortal:   Q5YRT3
- SMR:   Q5YRT3
- GeneID:   3109641
- GenomeReviews:   AP006618_GR
- KEGG:   nfa:nfa42590
- NMPDR:   fig|247156.1.peg.4106
- HOGENOM:   HBG586403
- OMA:   MFVAPRI
- ProtClustDB:   PRK00034
- BioCyc:   NFAR247156:NFA42590-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: NA

Molecular weight: Translated: 10397; Mature: 10266

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAISRDEVAHLARLSRLALSDAELDQFAGQLDSILSHVRTISEVAAADVPATASPDPVT
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NVTRPDTVVPGLTPDQALAAAPAVEEQRFMVPQILGEGE
CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PAISRDEVAHLARLSRLALSDAELDQFAGQLDSILSHVRTISEVAAADVPATASPDPVT
CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NVTRPDTVVPGLTPDQALAAAPAVEEQRFMVPQILGEGE
CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA