| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026232
Identifier: 54026232
GI number: 54026232
Start: 4414474
End: 4414980
Strand: Reverse
Name: 54026232
Synonym: nfa42610
Alternate gene names: NA
Gene position: 4414980-4414474 (Counterclockwise)
Preceding gene: 54026233
Following gene: 54026230
Centisome position: 73.32
GC content: 72.78
Gene sequence:
>507_bases ATGACCACCGGCAACGACCTGGTGACGATCCGTACCGCCACCGCCGCCGACCACGCCGCCGTCGGCGAACTCACCGTCGC CGTGTACGTGGGGGAGGGGTATGTGCGGGCCGACAGCCCCTACGCCGCCGAACTCGCCGACACCGCCCGCCGCGCCGCCG CCGCGCAGATCCTGGTGGCCGAGCACGCGGGCGAGCTGGTCGGTTCGCTGACCGTCGCCCGCCCCGGCACCCCCTACGCC GACATCGCCCGGCCGGGAGAGCTGGAGTTCCGGATGCTCGCGGTGTCGTCGCGAGCGCGCGGTCTCGGCGCGGGAACGGG CTTGGTGCGCAGTGTGATCGACCTCGCGCGCGCCGAATCCTTCGACGCCGTGGTACTCACCACGATGCCCGCGATGGCCG ATGCCCGCCGCCTCTACGACCGGCTGGGTTTCGCCCATGTGCCGCAGCGGGATTGGACGACCGAGACCGGACTGCCGCTG ACGGTGATGCGGCTGCCGCTGGACTGA
Upstream 100 bases:
>100_bases GACGAGCTGCCGGTGATCTATCCGGCGGGCAAGCCGGACCGCTGGCAGCTGGTCCGTCCCGCCGGTCCGGCCTGAACCGA GTCCAGAGGAGCATGTCTCG
Downstream 100 bases:
>100_bases CGGCGAATCGTCCGCCCAGAGACTCGTCCGCTCAGCGAATCGTCCGCTCGGCGAATCGTCCGCTCAGCCGAGGACGGTCG CGACGATGCCCGCGAGGTAG
Product: putative acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family Protein; Gnat Acetyltransferase; GNAT Family Acetyltransferase; GCN5 N-Acetyltransferase
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTTGNDLVTIRTATAADHAAVGELTVAVYVGEGYVRADSPYAAELADTARRAAAAQILVAEHAGELVGSLTVARPGTPYA DIARPGELEFRMLAVSSRARGLGAGTGLVRSVIDLARAESFDAVVLTTMPAMADARRLYDRLGFAHVPQRDWTTETGLPL TVMRLPLD
Sequences:
>Translated_168_residues MTTGNDLVTIRTATAADHAAVGELTVAVYVGEGYVRADSPYAAELADTARRAAAAQILVAEHAGELVGSLTVARPGTPYA DIARPGELEFRMLAVSSRARGLGAGTGLVRSVIDLARAESFDAVVLTTMPAMADARRLYDRLGFAHVPQRDWTTETGLPL TVMRLPLD >Mature_167_residues TTGNDLVTIRTATAADHAAVGELTVAVYVGEGYVRADSPYAAELADTARRAAAAQILVAEHAGELVGSLTVARPGTPYAD IARPGELEFRMLAVSSRARGLGAGTGLVRSVIDLARAESFDAVVLTTMPAMADARRLYDRLGFAHVPQRDWTTETGLPLT VMRLPLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17750; Mature: 17619
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGNDLVTIRTATAADHAAVGELTVAVYVGEGYVRADSPYAAELADTARRAAAAQILVA CCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHH EHAGELVGSLTVARPGTPYADIARPGELEFRMLAVSSRARGLGAGTGLVRSVIDLARAES HHHHHHHHEEEECCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC FDAVVLTTMPAMADARRLYDRLGFAHVPQRDWTTETGLPLTVMRLPLD CCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure TTGNDLVTIRTATAADHAAVGELTVAVYVGEGYVRADSPYAAELADTARRAAAAQILVA CCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHH EHAGELVGSLTVARPGTPYADIARPGELEFRMLAVSSRARGLGAGTGLVRSVIDLARAES HHHHHHHHEEEECCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC FDAVVLTTMPAMADARRLYDRLGFAHVPQRDWTTETGLPLTVMRLPLD CCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA