Click here to switch to the map view.

The map label for this gene is yxjM [H]

Identifier: 54026225

GI number: 54026225

Start: 4407329

End: 4408666

Strand: Reverse

Name: yxjM [H]

Synonym: nfa42540

Alternate gene names: 54026225

Gene position: 4408666-4407329 (Counterclockwise)

Preceding gene: 54026229

Following gene: 54026224

Centisome position: 73.22

GC content: 74.22

Gene sequence:

>1338_bases
GTGGAGCAGGACACGGGGCAGGCGGTGGCGCGGCGCGGACTGCGCGCCCGGCTGCGGGCGCAGGCCGCGACGATGAGCGG
CACCGCCTGGTTCGACCTGGCGACGGTGTTCGTCGTCCTCGTGCTCTACACCGTCGCCTGGCCGACGCTGCACCTGACGC
ACGTGGTCGCGCCGGGCGCGCAGCCGTTCGTCGCCGCGCTGGCCGCTTTCCCGCTGCTGCTGGTGCGGATCAACCCGGCA
CTGGGTTGGGCGGTGTCCGCGGGCTCCGCCCTGGTGATCGCGCTCGCGATCCCGCACCAGCCGGCCAACGAGATGCCGTT
CCAGGTCGTGCACGTGCTCTCGCTGATCGTGCTGCTGTTCGCGGTGGGACTGCGCGCGCCGATGCAGCTGGTGCTGCTGG
CCTGGGCGTCGACCTCGCTGCTGTTCGGCACCACCATGCCGGGTGAGGGCGAGGCATTCGCCAACGCGGCCTGGGGCTGG
CCGATCGCGCTGACGGTGGTCGTGCTGTTCGCGATGCTCATCCGCTGGCTGGTGCTCTCCCGCAGGCAACTGGTGCGCCA
GGAGGAGGAGAACGAGCTGGAGCGGGCCCGCCGCGCCATCCTCGAGGAGAAGGCGCGCATCGCGCGCGACCTGCACGACG
TCGTCGCTCACCACATGTCGCTGGTGGTGGTGCAGGCGCAGACCGCGCCCTACCGGGTGGCGGGCGTGAACGAGGCCGCG
CGCGCGGAGTTCGAATCCATCTCCACCACCGCGCGCGAGGCGCTCAACGAGATCCGCGGGATGCTCGGGGTGCTGCGCAG
CGACGGTGTGGCGCCCGAGCACTCCCCGCAGCCGAAGGCGGGGGAGGTGCTCGCCCTGTTCGAGGGTGCCCGCCGCGCGG
GTGTCGACATCGACTGGACCGTCGACGGCGACCTGTCGCGGGTCGCCGACACCACCGGGCTCGCGCTGTACCGGATCGTG
CAGGAGTCGCTGTCCAATGCGTCCCGGCACGCGCCGGGCGCGGCCGTCCGGGTGACCCTGCGCTGTGCCGACACCCTCGA
CCTGCTGGTCGTCAACGGCCCGGCGGCGGCTCCGGCCGGGTCCGCGGGCAACGGCGGGCACGGCATCGCGGGGATGCGGG
CCAGGGCACTGGCCGCCGGTGGCGAACTCGTCGCGGAGTCGACCGCCGACGGCGGTTTCGAGGTGCGCGCCCGGATGCCG
CTGACCCCCGACCCCGTCGTCACGGTCGCCGCGCCGGCCGTGCCCGCCGCATCGGTCGCGCCGGCCGCATCGGTCGCGCC
GGATTCTGCCGTCGTGGCGCAGCCCGCGCCGGTCGACGCATCCGGTCGCGGGGCGTGA

Upstream 100 bases:

>100_bases
TGTCGTAGTCATGAGAGGCAGGCGACGGAATCGGCGGGCATCCCCGACGGCGGCGGATCCCGCGCCGTCGAGCACCGAAG
CGACGGTCGGAGGACACAGC

Downstream 100 bases:

>100_bases
GCACCGCGCGATCGAACACCACACCGGGGAGTCGGCCGCGCGGCAATTAGGGTGGGCGAGTGGCAACAACGGTTCTCATC
GCCGACGACCAGGCAATGGT

Product: putative two-component system sensor kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MEQDTGQAVARRGLRARLRAQAATMSGTAWFDLATVFVVLVLYTVAWPTLHLTHVVAPGAQPFVAALAAFPLLLVRINPA
LGWAVSAGSALVIALAIPHQPANEMPFQVVHVLSLIVLLFAVGLRAPMQLVLLAWASTSLLFGTTMPGEGEAFANAAWGW
PIALTVVVLFAMLIRWLVLSRRQLVRQEEENELERARRAILEEKARIARDLHDVVAHHMSLVVVQAQTAPYRVAGVNEAA
RAEFESISTTAREALNEIRGMLGVLRSDGVAPEHSPQPKAGEVLALFEGARRAGVDIDWTVDGDLSRVADTTGLALYRIV
QESLSNASRHAPGAAVRVTLRCADTLDLLVVNGPAAAPAGSAGNGGHGIAGMRARALAAGGELVAESTADGGFEVRARMP
LTPDPVVTVAAPAVPAASVAPAASVAPDSAVVAQPAPVDASGRGA

Sequences:

>Translated_445_residues
MEQDTGQAVARRGLRARLRAQAATMSGTAWFDLATVFVVLVLYTVAWPTLHLTHVVAPGAQPFVAALAAFPLLLVRINPA
LGWAVSAGSALVIALAIPHQPANEMPFQVVHVLSLIVLLFAVGLRAPMQLVLLAWASTSLLFGTTMPGEGEAFANAAWGW
PIALTVVVLFAMLIRWLVLSRRQLVRQEEENELERARRAILEEKARIARDLHDVVAHHMSLVVVQAQTAPYRVAGVNEAA
RAEFESISTTAREALNEIRGMLGVLRSDGVAPEHSPQPKAGEVLALFEGARRAGVDIDWTVDGDLSRVADTTGLALYRIV
QESLSNASRHAPGAAVRVTLRCADTLDLLVVNGPAAAPAGSAGNGGHGIAGMRARALAAGGELVAESTADGGFEVRARMP
LTPDPVVTVAAPAVPAASVAPAASVAPDSAVVAQPAPVDASGRGA
>Mature_445_residues
MEQDTGQAVARRGLRARLRAQAATMSGTAWFDLATVFVVLVLYTVAWPTLHLTHVVAPGAQPFVAALAAFPLLLVRINPA
LGWAVSAGSALVIALAIPHQPANEMPFQVVHVLSLIVLLFAVGLRAPMQLVLLAWASTSLLFGTTMPGEGEAFANAAWGW
PIALTVVVLFAMLIRWLVLSRRQLVRQEEENELERARRAILEEKARIARDLHDVVAHHMSLVVVQAQTAPYRVAGVNEAA
RAEFESISTTAREALNEIRGMLGVLRSDGVAPEHSPQPKAGEVLALFEGARRAGVDIDWTVDGDLSRVADTTGLALYRIV
QESLSNASRHAPGAAVRVTLRCADTLDLLVVNGPAAAPAGSAGNGGHGIAGMRARALAAGGELVAESTADGGFEVRARMP
LTPDPVVTVAAPAVPAASVAPAASVAPDSAVVAQPAPVDASGRGA

Specific function: Probable member of the two-component regulatory system yxjM/yxjL. May activate yxjL by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46549; Mature: 46549

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQDTGQAVARRGLRARLRAQAATMSGTAWFDLATVFVVLVLYTVAWPTLHLTHVVAPGA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QPFVAALAAFPLLLVRINPALGWAVSAGSALVIALAIPHQPANEMPFQVVHVLSLIVLLF
HHHHHHHHHHHHHHEEECCHHCCEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
AVGLRAPMQLVLLAWASTSLLFGTTMPGEGEAFANAAWGWPIALTVVVLFAMLIRWLVLS
HHHCCCHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RRQLVRQEEENELERARRAILEEKARIARDLHDVVAHHMSLVVVQAQTAPYRVAGVNEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCHHH
RAEFESISTTAREALNEIRGMLGVLRSDGVAPEHSPQPKAGEVLALFEGARRAGVDIDWT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCHHHCCCEEEEE
VDGDLSRVADTTGLALYRIVQESLSNASRHAPGAAVRVTLRCADTLDLLVVNGPAAAPAG
ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCC
SAGNGGHGIAGMRARALAAGGELVAESTADGGFEVRARMPLTPDPVVTVAAPAVPAASVA
CCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCC
PAASVAPDSAVVAQPAPVDASGRGA
CCCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MEQDTGQAVARRGLRARLRAQAATMSGTAWFDLATVFVVLVLYTVAWPTLHLTHVVAPGA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QPFVAALAAFPLLLVRINPALGWAVSAGSALVIALAIPHQPANEMPFQVVHVLSLIVLLF
HHHHHHHHHHHHHHEEECCHHCCEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
AVGLRAPMQLVLLAWASTSLLFGTTMPGEGEAFANAAWGWPIALTVVVLFAMLIRWLVLS
HHHCCCHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RRQLVRQEEENELERARRAILEEKARIARDLHDVVAHHMSLVVVQAQTAPYRVAGVNEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCHHH
RAEFESISTTAREALNEIRGMLGVLRSDGVAPEHSPQPKAGEVLALFEGARRAGVDIDWT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCHHHCCCEEEEE
VDGDLSRVADTTGLALYRIVQESLSNASRHAPGAAVRVTLRCADTLDLLVVNGPAAAPAG
ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCC
SAGNGGHGIAGMRARALAAGGELVAESTADGGFEVRARMPLTPDPVVTVAAPAVPAASVA
CCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCC
PAASVAPDSAVVAQPAPVDASGRGA
CCCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]