| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is entD [C]
Identifier: 54026024
GI number: 54026024
Start: 4200539
End: 4201207
Strand: Reverse
Name: entD [C]
Synonym: nfa40540
Alternate gene names: 54026024
Gene position: 4201207-4200539 (Counterclockwise)
Preceding gene: 54026025
Following gene: 54026023
Centisome position: 69.77
GC content: 70.85
Gene sequence:
>669_bases ATGATCGAGAACATTCTGCCCAGCGGGGTGGCCGCTGCCGAGCTGCTGGAGTACCCGGAGGATCTGAAGCCGCACCCGGC CGAGGAACATCTGATCGCCCAGTCGGTGGAGAAGCGCCGTCGCGACTTCATCGGTGCCAGGCACTGCGCGCGCCTGGCGC TGCGTGAACTCGGCGAGCCGCCGGTGGCGATCGGCAAGGGGGAGCGGGGCGCGCCGGTGTGGCCGCGCGGCATCGTCGGC AGCCTCACCCACTGCGACGGCTACCGGGCCGCGGCGCTGGCGCACAAGATCCGGTTCCGTTCGGTCGGTATCGACGCCGA GCCGCACGGCCCGCTGCCCGACGGCGTGCTCGACTCGGTGAGCCTGCCGCAGGAGCGGGAGTGGCTGCGCCGCACGGATT CCGGCCTGCACCTGGACCGGCTGCTGTTCTGCGCCAAGGAAGCCACCTACAAGGCATGGTTCCCGCTCACCGCGCGCTGG CTCGGCTTCGAGGACGCGCACATCACCTTCACCGTCGAGGAGGACGGCGCGGGCGGCGGTTCGGGCACCTTCCACACCGA TCTGCTGGTGCCGGGCCAGACCACCGACGGTGGCCTGCCGCTGACCTCGTTCGACGGACGCTGGCTGATCGCCGACGGGC TGATCCTGACCGCGATCGTGCACGACTGA
Upstream 100 bases:
>100_bases CACAGCGTAGGCGCGGACTGTGAGGCGGCCGTCGAATGTCGGGAAGCGCTCGGTTCGCCCGCGGGGGAGGGTCGCCCGGC TTCGGCTAGGCTCGCAACCG
Downstream 100 bases:
>100_bases TGGGCGAGCGCAGCGCACCGACGCGCCGCGTCGACCCGCTCGGCGGGCTGCTCGTCGTCGACAAGGACGGCGGCATGACC AGCCACGACGTCGTCGCGCG
Product: putative phosphopantetheinyl transferase
Products: pyrophosphate; AMP; enterobactin; aryl carrier protein/isochorismatase; 3',5'-ADP; serine activating enzyme + [C]
Alternate protein names: Phosphopantetheinyl Transferase; Phosphopantetheinyl Transferase PptA; Sfp-Type Phosphopantetheinyl Transferase; Holo-[Acyl-Carrier-Protein] Synthase; EntD Family Protein; 4-Phosphopantetheinyl Tranferase; Non-Ribosomal Peptide Synthetase; 4-Phosphopantetheinyl Transferase Superfamily Protein; Phosphopantetheinyl Transferase PptII; Siderophore Biosynthesis Protein; Transferase; Isochorismatase EntB; 4-Phosphopantetheinyl Transferase EntD; 4-Phosphopantetheinyl Transferase Superfamily; Vibriobactin Synthase Component D
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MIENILPSGVAAAELLEYPEDLKPHPAEEHLIAQSVEKRRRDFIGARHCARLALRELGEPPVAIGKGERGAPVWPRGIVG SLTHCDGYRAAALAHKIRFRSVGIDAEPHGPLPDGVLDSVSLPQEREWLRRTDSGLHLDRLLFCAKEATYKAWFPLTARW LGFEDAHITFTVEEDGAGGGSGTFHTDLLVPGQTTDGGLPLTSFDGRWLIADGLILTAIVHD
Sequences:
>Translated_222_residues MIENILPSGVAAAELLEYPEDLKPHPAEEHLIAQSVEKRRRDFIGARHCARLALRELGEPPVAIGKGERGAPVWPRGIVG SLTHCDGYRAAALAHKIRFRSVGIDAEPHGPLPDGVLDSVSLPQEREWLRRTDSGLHLDRLLFCAKEATYKAWFPLTARW LGFEDAHITFTVEEDGAGGGSGTFHTDLLVPGQTTDGGLPLTSFDGRWLIADGLILTAIVHD >Mature_222_residues MIENILPSGVAAAELLEYPEDLKPHPAEEHLIAQSVEKRRRDFIGARHCARLALRELGEPPVAIGKGERGAPVWPRGIVG SLTHCDGYRAAALAHKIRFRSVGIDAEPHGPLPDGVLDSVSLPQEREWLRRTDSGLHLDRLLFCAKEATYKAWFPLTARW LGFEDAHITFTVEEDGAGGGSGTFHTDLLVPGQTTDGGLPLTSFDGRWLIADGLILTAIVHD
Specific function: Catalyzes The Transfer Of The 4'-Phosphopantetheine Moiety From Coenzyme A To Apo-Domains Of Both Entb (An Arcp Domain) And Entf (A Pcp Domain). Plays An Essential Role In The Assembly Of The Enterobactin. [C]
COG id: COG2977
COG function: function code Q; Phosphopantetheinyl transferase component of siderophore synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.8.- [C]
Molecular weight: Translated: 24234; Mature: 24234
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIENILPSGVAAAELLEYPEDLKPHPAEEHLIAQSVEKRRRDFIGARHCARLALRELGEP CCCCCCCCCHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PVAIGKGERGAPVWPRGIVGSLTHCDGYRAAALAHKIRFRSVGIDAEPHGPLPDGVLDSV CEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHCC SLPQEREWLRRTDSGLHLDRLLFCAKEATYKAWFPLTARWLGFEDAHITFTVEEDGAGGG CCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCHHCCCCCCCEEEEEEECCCCCCC SGTFHTDLLVPGQTTDGGLPLTSFDGRWLIADGLILTAIVHD CCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEEEECC >Mature Secondary Structure MIENILPSGVAAAELLEYPEDLKPHPAEEHLIAQSVEKRRRDFIGARHCARLALRELGEP CCCCCCCCCHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PVAIGKGERGAPVWPRGIVGSLTHCDGYRAAALAHKIRFRSVGIDAEPHGPLPDGVLDSV CEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHCC SLPQEREWLRRTDSGLHLDRLLFCAKEATYKAWFPLTARWLGFEDAHITFTVEEDGAGGG CCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCHHCCCCCCCEEEEEEECCCCCCC SGTFHTDLLVPGQTTDGGLPLTSFDGRWLIADGLILTAIVHD CCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate; Coenzyme A; apo-EntB; apo-serine activating enzyme [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin Coenzyme A + apo-EntB = aryl carrier protein/isochorismatase + 3',5'-ADP Coenzyme A + apo-serine activating enzyme = 3',5'-ADP + serine activating enzyme [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA