| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026025
Identifier: 54026025
GI number: 54026025
Start: 4201285
End: 4202280
Strand: Reverse
Name: 54026025
Synonym: nfa40550
Alternate gene names: NA
Gene position: 4202280-4201285 (Counterclockwise)
Preceding gene: 54026026
Following gene: 54026024
Centisome position: 69.79
GC content: 69.08
Gene sequence:
>996_bases GTGCGCCGGTGCGGCGCGTCATGTGACAAGGTGGGTCGAGTGATACCCAAGTTGATGGCGGTGAGCGACATCCACGTCGG GCACCAGGGCAATCGGCCCGTGGTCGAGCAGATCCGGCCCGATTCGCCGGAGGACTGGCTGATCGTGGCCGGCGACGTGG GGGAGAAGACCGACGACATCCGCTGGGCGCTGCGCCTGCTGCGCGAACGCTTCGCCAAGGTGATCTGGGTGCCCGGCAAC CACGAACTGTGGACCACGGCCAAGGACCCGGTGCAGATGCACGGCGTCGCCCGCTACGACTACCTGGTGTCGCTGTGCCG CGACCTCGACGTGGTGACCCCGGAGGACCCGTTTCCGGTGTGGCGCGGCCCGGGCAGCGAGGAGCACGGCGGCGCGGTGA CCCTGGTCCCGATGTTCCTGCTCTACGACTATTCGTTCCTGCCCGAGGGCGCCACCGGCAAGGCCGACGGCCTCGCCATC GCCCGTTCCCGCAACGTCGTCGCCACCGACGAGTTCCTGCTCTCGCCCGATCCGTATCTCACCCGCGACGCCTGGTGCCA TGACCGCCTGCAGGTGACGCAGCGGCGCCTCGAAGCGCTGCCCGCGGGCACCCCGCTGGTGCTGATCAACCACTTCCCGC TCGTCCGCGAACCCACCGATGTGTTGTTCTACCCGGAGTTCGCGCTCTGGTGTGGGACGACCCGTACCGCCGACTGGCAC ACCCGCTACAACGTGCTGTGCTCGGTCTACGGGCATCTGCACATTCCGCGCACCTCCTACTACGACGGTGTCCGCTTCGA GGAGGTCTCACTCGGCTACCCGCGCGAATGGCAGCGGCGCGGCCTGCCCGACCGCCTGCTGCGCCAGATCCTGCCCGCGC CGGAATACCCGCCCGGCACGCTGAACAAGTGGGGCGGCCACTTCCGACTCACCCCCGAGATGGAGGCGGCGGCAGCGGAG ATGCGCGCCAAGGCACAGCGTAGGCGCGGACTGTGA
Upstream 100 bases:
>100_bases CAACGGCCGCCTGCGCGTCGCGCCCGGTTTCGCCCCCGCCGCACGGCTGCGGTGGAGTCACCGGTCCTGAACTCCCGCGA CCAGCGGGCGGGCATGGCGC
Downstream 100 bases:
>100_bases GGCGGCCGTCGAATGTCGGGAAGCGCTCGGTTCGCCCGCGGGGGAGGGTCGCCCGGCTTCGGCTAGGCTCGCAACCGATG ATCGAGAACATTCTGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: SimX4-Like Protein; Phosphoesterase; Ser/Thr Protein Phosphatase; Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Protein Phosphatase Family Protein; Phosphohydrolase; Calcineurin-Like Phosphoesterase; Metallo-Phosphos-Hydrolase
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MRRCGASCDKVGRVIPKLMAVSDIHVGHQGNRPVVEQIRPDSPEDWLIVAGDVGEKTDDIRWALRLLRERFAKVIWVPGN HELWTTAKDPVQMHGVARYDYLVSLCRDLDVVTPEDPFPVWRGPGSEEHGGAVTLVPMFLLYDYSFLPEGATGKADGLAI ARSRNVVATDEFLLSPDPYLTRDAWCHDRLQVTQRRLEALPAGTPLVLINHFPLVREPTDVLFYPEFALWCGTTRTADWH TRYNVLCSVYGHLHIPRTSYYDGVRFEEVSLGYPREWQRRGLPDRLLRQILPAPEYPPGTLNKWGGHFRLTPEMEAAAAE MRAKAQRRRGL
Sequences:
>Translated_331_residues MRRCGASCDKVGRVIPKLMAVSDIHVGHQGNRPVVEQIRPDSPEDWLIVAGDVGEKTDDIRWALRLLRERFAKVIWVPGN HELWTTAKDPVQMHGVARYDYLVSLCRDLDVVTPEDPFPVWRGPGSEEHGGAVTLVPMFLLYDYSFLPEGATGKADGLAI ARSRNVVATDEFLLSPDPYLTRDAWCHDRLQVTQRRLEALPAGTPLVLINHFPLVREPTDVLFYPEFALWCGTTRTADWH TRYNVLCSVYGHLHIPRTSYYDGVRFEEVSLGYPREWQRRGLPDRLLRQILPAPEYPPGTLNKWGGHFRLTPEMEAAAAE MRAKAQRRRGL >Mature_331_residues MRRCGASCDKVGRVIPKLMAVSDIHVGHQGNRPVVEQIRPDSPEDWLIVAGDVGEKTDDIRWALRLLRERFAKVIWVPGN HELWTTAKDPVQMHGVARYDYLVSLCRDLDVVTPEDPFPVWRGPGSEEHGGAVTLVPMFLLYDYSFLPEGATGKADGLAI ARSRNVVATDEFLLSPDPYLTRDAWCHDRLQVTQRRLEALPAGTPLVLINHFPLVREPTDVLFYPEFALWCGTTRTADWH TRYNVLCSVYGHLHIPRTSYYDGVRFEEVSLGYPREWQRRGLPDRLLRQILPAPEYPPGTLNKWGGHFRLTPEMEAAAAE MRAKAQRRRGL
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37700; Mature: 37700
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRCGASCDKVGRVIPKLMAVSDIHVGHQGNRPVVEQIRPDSPEDWLIVAGDVGEKTDDI CCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCHHHHCCCCCCCCEEEEECCCCCCHHHH RWALRLLRERFAKVIWVPGNHELWTTAKDPVQMHGVARYDYLVSLCRDLDVVTPEDPFPV HHHHHHHHHHHHEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC WRGPGSEEHGGAVTLVPMFLLYDYSFLPEGATGKADGLAIARSRNVVATDEFLLSPDPYL CCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEECCCEEECCCCCC TRDAWCHDRLQVTQRRLEALPAGTPLVLINHFPLVREPTDVLFYPEFALWCGTTRTADWH CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCHHEEECCCCCCCHH TRYNVLCSVYGHLHIPRTSYYDGVRFEEVSLGYPREWQRRGLPDRLLRQILPAPEYPPGT HHHHHHHHHHHCEECCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHCCCCCCCCCC LNKWGGHFRLTPEMEAAAAEMRAKAQRRRGL CCCCCCEEEECCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRCGASCDKVGRVIPKLMAVSDIHVGHQGNRPVVEQIRPDSPEDWLIVAGDVGEKTDDI CCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCHHHHCCCCCCCCEEEEECCCCCCHHHH RWALRLLRERFAKVIWVPGNHELWTTAKDPVQMHGVARYDYLVSLCRDLDVVTPEDPFPV HHHHHHHHHHHHEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC WRGPGSEEHGGAVTLVPMFLLYDYSFLPEGATGKADGLAIARSRNVVATDEFLLSPDPYL CCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEECCCEEECCCCCC TRDAWCHDRLQVTQRRLEALPAGTPLVLINHFPLVREPTDVLFYPEFALWCGTTRTADWH CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCHHEEECCCCCCCHH TRYNVLCSVYGHLHIPRTSYYDGVRFEEVSLGYPREWQRRGLPDRLLRQILPAPEYPPGT HHHHHHHHHHHCEECCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHCCCCCCCCCC LNKWGGHFRLTPEMEAAAAEMRAKAQRRRGL CCCCCCEEEECCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA