| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026004
Identifier: 54026004
GI number: 54026004
Start: 4185657
End: 4185914
Strand: Reverse
Name: 54026004
Synonym: nfa40340
Alternate gene names: NA
Gene position: 4185914-4185657 (Counterclockwise)
Preceding gene: 54026005
Following gene: 54026003
Centisome position: 69.52
GC content: 67.05
Gene sequence:
>258_bases GTGACCGCCACGTTGACGGCCGTCATCTGGGAAGACCGCCACACCGACACCACCGCCCACCTGTTCAGCGACTTCGCCGA CGCCGTCGCCTGGGCGTGGGAACAGGCATGGCAGATCGAAGGCCGGCGCGACCGGCCCCTGATCGAAACCCGGCAGTACC CGTCCGGCGAGGTCCGCATCAGCTACGGCACCGAAGGCGACGGCCTGTGGATCCGCACCGCGATCGTCGACGACGAACTC ACGAAACACCGAGAATAG
Upstream 100 bases:
>100_bases CCGTCCTCGTCGCCTACGGCGGACCCGACGCCGCCGCCCTGGCCCGCAGCGGCCTCGACGGCACCTACATCCACCTCACC CAGCCCGCGAAGGAGACCGC
Downstream 100 bases:
>100_bases GAGGCTGATTGCCCACCCCCTACTACCGCGACCCGTACGTCACCCTCTACCACGGCTCCTGCCTGGACAACGACGACTGG CTGACCGCCGACATCCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MTATLTAVIWEDRHTDTTAHLFSDFADAVAWAWEQAWQIEGRRDRPLIETRQYPSGEVRISYGTEGDGLWIRTAIVDDEL TKHRE
Sequences:
>Translated_85_residues MTATLTAVIWEDRHTDTTAHLFSDFADAVAWAWEQAWQIEGRRDRPLIETRQYPSGEVRISYGTEGDGLWIRTAIVDDEL TKHRE >Mature_84_residues TATLTAVIWEDRHTDTTAHLFSDFADAVAWAWEQAWQIEGRRDRPLIETRQYPSGEVRISYGTEGDGLWIRTAIVDDELT KHRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9861; Mature: 9730
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLTAVIWEDRHTDTTAHLFSDFADAVAWAWEQAWQIEGRRDRPLIETRQYPSGEVRI CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE SYGTEGDGLWIRTAIVDDELTKHRE EECCCCCCEEEEEEEECCHHHCCCC >Mature Secondary Structure TATLTAVIWEDRHTDTTAHLFSDFADAVAWAWEQAWQIEGRRDRPLIETRQYPSGEVRI CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE SYGTEGDGLWIRTAIVDDELTKHRE EECCCCCCEEEEEEEECCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA