Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026005

Identifier: 54026005

GI number: 54026005

Start: 4185911

End: 4186426

Strand: Reverse

Name: 54026005

Synonym: nfa40350

Alternate gene names: NA

Gene position: 4186426-4185911 (Counterclockwise)

Preceding gene: 54026006

Following gene: 54026004

Centisome position: 69.53

GC content: 73.45

Gene sequence:

>516_bases
ATGACCTCGCGCGCTATAGGCGGCCACCATTCCGCCCGCGCCGGATCCAACGTGTGGCTCACCCCGCCCGGTGTGATCGC
GGCACTCGGTGAATTCGACCTCGACCCCTGCGCCGCCAGCCAACCACGCCCCTGGGACACGGCCCGCCACCACATCGCAC
CCCCCGACAACGGGCTAGCCGCCGACTGGGCAGGCCGAGTCTTCCTCAACCCGCCCTACACCGAGCTGGCCGCCTGGCTC
GGCAAACTCGCCGACCACGGCCACGGCACCGCGCTCGTGTTCGCGCGCACCGAAACCCGCTGGTTCGTCGACCTCGTCTG
GGCGCGCGCCACCGCGGTCCTGTTCCTCCACCGCCGGCTGCACTTCCACCTCCCGGACGGCGCCCGCGCCCGCGGCAACT
CCGGCGCGCCCTCCGTCCTCGTCGCCTACGGCGGACCCGACGCCGCCGCCCTGGCCCGCAGCGGCCTCGACGGCACCTAC
ATCCACCTCACCCAGCCCGCGAAGGAGACCGCGTGA

Upstream 100 bases:

>100_bases
TGCTCGACCGGATCGAGCGTGACCTCGCGGACGCGTTCGCCGGCGTGGCCGACCAGATCAGACGAGCTAGACGGCTCGGT
CTCCAGACCCAGGACGTAGC

Downstream 100 bases:

>100_bases
CCGCCACGTTGACGGCCGTCATCTGGGAAGACCGCCACACCGACACCACCGCCCACCTGTTCAGCGACTTCGCCGACGCC
GTCGCCTGGGCGTGGGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTSRAIGGHHSARAGSNVWLTPPGVIAALGEFDLDPCAASQPRPWDTARHHIAPPDNGLAADWAGRVFLNPPYTELAAWL
GKLADHGHGTALVFARTETRWFVDLVWARATAVLFLHRRLHFHLPDGARARGNSGAPSVLVAYGGPDAAALARSGLDGTY
IHLTQPAKETA

Sequences:

>Translated_171_residues
MTSRAIGGHHSARAGSNVWLTPPGVIAALGEFDLDPCAASQPRPWDTARHHIAPPDNGLAADWAGRVFLNPPYTELAAWL
GKLADHGHGTALVFARTETRWFVDLVWARATAVLFLHRRLHFHLPDGARARGNSGAPSVLVAYGGPDAAALARSGLDGTY
IHLTQPAKETA
>Mature_170_residues
TSRAIGGHHSARAGSNVWLTPPGVIAALGEFDLDPCAASQPRPWDTARHHIAPPDNGLAADWAGRVFLNPPYTELAAWLG
KLADHGHGTALVFARTETRWFVDLVWARATAVLFLHRRLHFHLPDGARARGNSGAPSVLVAYGGPDAAALARSGLDGTYI
HLTQPAKETA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18249; Mature: 18117

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRAIGGHHSARAGSNVWLTPPGVIAALGEFDLDPCAASQPRPWDTARHHIAPPDNGLA
CCCCCCCCCCCCCCCCEEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADWAGRVFLNPPYTELAAWLGKLADHGHGTALVFARTETRWFVDLVWARATAVLFLHRRL
CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
HFHLPDGARARGNSGAPSVLVAYGGPDAAALARSGLDGTYIHLTQPAKETA
EEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
TSRAIGGHHSARAGSNVWLTPPGVIAALGEFDLDPCAASQPRPWDTARHHIAPPDNGLA
CCCCCCCCCCCCCCCEEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADWAGRVFLNPPYTELAAWLGKLADHGHGTALVFARTETRWFVDLVWARATAVLFLHRRL
CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
HFHLPDGARARGNSGAPSVLVAYGGPDAAALARSGLDGTYIHLTQPAKETA
EEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA