Click here to switch to the map view.

The map label for this gene is 54025746

Identifier: 54025746

GI number: 54025746

Start: 3993779

End: 3994138

Strand: Reverse

Name: 54025746

Synonym: nfa37760

Alternate gene names: NA

Gene position: 3994138-3993779 (Counterclockwise)

Preceding gene: 54025747

Following gene: 54025741

Centisome position: 66.33

GC content: 69.44

Gene sequence:

>360_bases
GTGAACGCGTCCCCGCACCGGAGACGCCCGAAAGGAAGGTCGTGCCCCATGAAAGCCAGCCGCGTCGCCGGACTGATCGC
CTTCGCCTGCCTCTCGGCGGCGGGCTGCGCGGTTCAGATCGGGAACGACACCCCCTCCGTCGCCGAAGCCGACCTGGAGC
GCTCGGTCAAGGAGACCCTCACCCAGCAGGTGGGCCAGGAACCGGACACCATCGACTGCCCGGGCGATCTCGAGGGCGAG
GTCGGCAACACCATGCGCTGCACGCTCACCGCGGGCGGCGACACCCTGGGCCTCACCGTCACGGTCACCTCGGTGCAGGA
CGAGACCGTCAACTACGACGTCCAGGTCGATCCCGCCTGA

Upstream 100 bases:

>100_bases
GACACCGGTCCGCGGCGACTGGCTTGATCACGAGCGGGACTCGACGCGGCAACGACGTGCGTCAACAGCGCCCGCGCGGG
CCTCGATCTGGGGTAGGTCT

Downstream 100 bases:

>100_bases
GACGTGGCCCCGAGACCGAGACGTGGCCCGAGACGAAAGAACGCCGGACGTGTGCGCACACGTCCGGCGTCTGGTCGTGG
GGAGAGTAAGGATCAGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNASPHRRRPKGRSCPMKASRVAGLIAFACLSAAGCAVQIGNDTPSVAEADLERSVKETLTQQVGQEPDTIDCPGDLEGE
VGNTMRCTLTAGGDTLGLTVTVTSVQDETVNYDVQVDPA

Sequences:

>Translated_119_residues
MNASPHRRRPKGRSCPMKASRVAGLIAFACLSAAGCAVQIGNDTPSVAEADLERSVKETLTQQVGQEPDTIDCPGDLEGE
VGNTMRCTLTAGGDTLGLTVTVTSVQDETVNYDVQVDPA
>Mature_119_residues
MNASPHRRRPKGRSCPMKASRVAGLIAFACLSAAGCAVQIGNDTPSVAEADLERSVKETLTQQVGQEPDTIDCPGDLEGE
VGNTMRCTLTAGGDTLGLTVTVTSVQDETVNYDVQVDPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12435; Mature: 12435

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASPHRRRPKGRSCPMKASRVAGLIAFACLSAAGCAVQIGNDTPSVAEADLERSVKETL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH
TQQVGQEPDTIDCPGDLEGEVGNTMRCTLTAGGDTLGLTVTVTSVQDETVNYDVQVDPA
HHHHCCCCCCEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCC
>Mature Secondary Structure
MNASPHRRRPKGRSCPMKASRVAGLIAFACLSAAGCAVQIGNDTPSVAEADLERSVKETL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH
TQQVGQEPDTIDCPGDLEGEVGNTMRCTLTAGGDTLGLTVTVTSVQDETVNYDVQVDPA
HHHHCCCCCCEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA