| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
Click here to switch to the map view.
The map label for this gene is 54025741
Identifier: 54025741
GI number: 54025741
Start: 3989333
End: 3989578
Strand: Reverse
Name: 54025741
Synonym: nfa37710
Alternate gene names: NA
Gene position: 3989578-3989333 (Counterclockwise)
Preceding gene: 54025746
Following gene: 54025739
Centisome position: 66.26
GC content: 64.63
Gene sequence:
>246_bases ATGGAAGGCGTGAGTACCGACACCCTGGTTCGCCCGGATACGACGACCGACGAGACGACGGGCGACGACACCCCGAAGTT CTTCCACTACGTGAAGAAGGACAAGATCGCCGAGAGCGCCGTGATGGGCACGATGGTGGTCGCGCTGTGTGGCGAGGTGT TCCCGGTGACCCGCTCGCCGAAGCCCGGCTCGCCGGTCTGCCCGGAATGCAAGAAGGTCTACGAGACCCTGCGCAAGGGC GACTGA
Upstream 100 bases:
>100_bases GTCGGGGGCGTCGCCGTGCTGCTGCATACCCACGAGTCTTGCACTCTCCGGGGCCGGGCGCATACACCGAGGTCGGCCGG GGCGGCGATGATGCGGCATC
Downstream 100 bases:
>100_bases CCCGGCCGTCTCAGCCCGCGCTGTGCAGTGGCGAGGTGGCTTCGCCGCCCGGCGCGGGTAGTCCCGCGGGCCGCGCGTCC GCGTCGTCGTCGGTGGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MEGVSTDTLVRPDTTTDETTGDDTPKFFHYVKKDKIAESAVMGTMVVALCGEVFPVTRSPKPGSPVCPECKKVYETLRKG D
Sequences:
>Translated_81_residues MEGVSTDTLVRPDTTTDETTGDDTPKFFHYVKKDKIAESAVMGTMVVALCGEVFPVTRSPKPGSPVCPECKKVYETLRKG D >Mature_81_residues MEGVSTDTLVRPDTTTDETTGDDTPKFFHYVKKDKIAESAVMGTMVVALCGEVFPVTRSPKPGSPVCPECKKVYETLRKG D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8840; Mature: 8840
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGVSTDTLVRPDTTTDETTGDDTPKFFHYVKKDKIAESAVMGTMVVALCGEVFPVTRSP CCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KPGSPVCPECKKVYETLRKGD CCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MEGVSTDTLVRPDTTTDETTGDDTPKFFHYVKKDKIAESAVMGTMVVALCGEVFPVTRSP CCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KPGSPVCPECKKVYETLRKGD CCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA