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The map label for this gene is ydaO [H]

Identifier: 54025715

GI number: 54025715

Start: 3964572

End: 3966572

Strand: Reverse

Name: ydaO [H]

Synonym: nfa37450

Alternate gene names: 54025715

Gene position: 3966572-3964572 (Counterclockwise)

Preceding gene: 54025718

Following gene: 54025714

Centisome position: 65.88

GC content: 67.47

Gene sequence:

>2001_bases
ATGCTCGCTCCAGTGTCCAAGTTGACGACGGCAGCCAAGCGCGTGCTGCTGGGCAGGCCCTTTCGCAGTGATTCGCTCGG
GCACACCCTGTTGCCGAAGCGGATCGCGCTTCCGGTCTTCGCCTCCGACGCCATGTCATCGGTGGCGTACGCGCCGGAGG
AGATCTTCCTCATGCTGTCGGTGGCCGGTGTCTCGGCCTACCTCTACGCACCCTGGGTGGGCCTGGCCGTCGCGTTCGTG
ATGGCCGTGGTGGTGGCCAGTTACCGGCAGAACGTGCACGCCTACCCGTCCGGCGGCGGCGACTACGAGGTGGCGACCAC
CAACATCGGCCCGAACGCCGGGCTCACCGTGGGCAGCGCTCTGCTGGTCGACTACGTGCTCACCGTCGCGGTCTCGATCT
CCTCGGCGGCCTCCAACATCGGCTCGGCCATTCCGTTCGTGGCCACCCACAAGGTGCTGTTCGCGGTGGTCGCCATCGCG
TTGCTGACCGCGGTGAACCTGCGCGGTGTCCGCGAGTCCGGCACCGCGTTCGCGATTCCCACCTACGCCTTCATGTTCGG
CATGTTCCTGATGCTCGGCTGGGGGCTGATCGAGGTGTACGTCTTCGGCGAGGACCTGCGGGCCGAGTCGGCCGGTTTCG
GGCTCACCGCCGAGGAGGAGCACCTGTACGGGCTGGCGTTCGCCTTCCTCATCGCGCGCGCATTCTCCTCCGGCTGTGCC
GCGCTCACCGGTGTGGAGGCGATCAGCAACGGCGTGCCCGCCTTCCGCAAGCCCAAATCGCGCAACGCCGCCACCACCCT
GCTGCTGCTCGGCATGATCGCGATCACCCTGCTGATGGGCATCATCATGCTGGCGCAGAAGGTGGGAGTGGTCTACGCCC
ACGACACCGACAACCTGGTCGGCGCGCCCGACGACTACCACCAGAAGACGTTGATCGCCCAGCTCGCCGAGGCGGTGTTC
CACGACTTCCCGGTCGGCTTCTACTTCGTCACCGCGGTCACCGCGCTGATCCTGGTGCTGGCGGCCAACACCGCGTTCAA
CGGCTTCCCGGTGCTCGGCTCGATCCTGGCCCAGGACCGTTACCTGCCCCGCCAGCTGCACACCCGCGGCGACCGGCTGG
CCTTCAGTAACGGCATCCTGTTCCTCTCCGGCGCGGCGATCGCCTTCGTCGTGGTGTTCGGCGCCGAGGTGACCAAGCTG
ATCCAGCTCTACATCGTCGGCGTGTTCGTCTCCTTCGTGTTGAGCCAGACCGGCATGCTGCGGCACTGGACGCGGCTGCT
GCGCACCGAGACCGACCCCGCGCAGCGGGCCAGGATGCAGCGTTCGCGGGTGATCAACGCCGTCGGTCTCACGGCCACCG
GCACGGTGCTGGTGATCGTGCTCGTCACCAAGTTCTTCGCCGGCGCGTGGATCGCGATCCTGACCATGGCGGCGATCTTC
GTGCTGATGAAAATGATCCGCCGCCACTACGATTCGGTGTCCAAGGAACTCGACGAGCACGACTGGGACGGCGTGCTGCC
CAGCCGCTCGCACGCGATCGTGCTGGTCTCCAAACTGCACCTGCCGACCCGGCGGGCGCTCGCCTACGCCCGCGCCACCC
GGCCCGACACCCTCGAGGCGGTGACGGTCAACGTCGACGAGGCCGATACCCGAGAGCTGGTCCGCGAGTGGGAGCGTAGC
GATATCACGGTGCCGCTCAAGGTCGTCGAATCGCCCTACCGCGAGATCACCAAACCGGTCCTGGACTACGTCAAGCGGGT
GCGCCGGGACGCCCCCCGCGACGTGGTGACCGTGTTCATCCCCGAGTACGTGGTCGGACACTGGTGGGAGCAGGTGCTGC
ACAACCAGAGTGCGCTACGGCTCAAGGGCAGGCTGCTGTTCGAGCCGGGCGTCATGGTGACCAGCGTGCCGTGGCAGTTG
AGTTCCTCGACCCGGGCCAAGCAGACCGCCGACGTCAACGCGCCGGGCGCGGTGCGGCGCGGATACGGCGATCGGCCGTG
A

Upstream 100 bases:

>100_bases
GACTCGTCCATGGCCCAGTTTCCCCCTGCGCCACACCGGCAAACCCGGGGGTGTGCGGCGTGTTCGCCGACCCCCCGGGC
GATCCACCGTCCGGGGATCT

Downstream 100 bases:

>100_bases
TCGGATGAACGGCTGGTCGGGCCGCAGCTTCGAGATCCGGCTGGGGCCGCCCGGGCACGGCGGCTTCTGCGTGGGCAGGC
ACGAGGGCCGGGTGGTGTTC

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MLAPVSKLTTAAKRVLLGRPFRSDSLGHTLLPKRIALPVFASDAMSSVAYAPEEIFLMLSVAGVSAYLYAPWVGLAVAFV
MAVVVASYRQNVHAYPSGGGDYEVATTNIGPNAGLTVGSALLVDYVLTVAVSISSAASNIGSAIPFVATHKVLFAVVAIA
LLTAVNLRGVRESGTAFAIPTYAFMFGMFLMLGWGLIEVYVFGEDLRAESAGFGLTAEEEHLYGLAFAFLIARAFSSGCA
ALTGVEAISNGVPAFRKPKSRNAATTLLLLGMIAITLLMGIIMLAQKVGVVYAHDTDNLVGAPDDYHQKTLIAQLAEAVF
HDFPVGFYFVTAVTALILVLAANTAFNGFPVLGSILAQDRYLPRQLHTRGDRLAFSNGILFLSGAAIAFVVVFGAEVTKL
IQLYIVGVFVSFVLSQTGMLRHWTRLLRTETDPAQRARMQRSRVINAVGLTATGTVLVIVLVTKFFAGAWIAILTMAAIF
VLMKMIRRHYDSVSKELDEHDWDGVLPSRSHAIVLVSKLHLPTRRALAYARATRPDTLEAVTVNVDEADTRELVREWERS
DITVPLKVVESPYREITKPVLDYVKRVRRDAPRDVVTVFIPEYVVGHWWEQVLHNQSALRLKGRLLFEPGVMVTSVPWQL
SSSTRAKQTADVNAPGAVRRGYGDRP

Sequences:

>Translated_666_residues
MLAPVSKLTTAAKRVLLGRPFRSDSLGHTLLPKRIALPVFASDAMSSVAYAPEEIFLMLSVAGVSAYLYAPWVGLAVAFV
MAVVVASYRQNVHAYPSGGGDYEVATTNIGPNAGLTVGSALLVDYVLTVAVSISSAASNIGSAIPFVATHKVLFAVVAIA
LLTAVNLRGVRESGTAFAIPTYAFMFGMFLMLGWGLIEVYVFGEDLRAESAGFGLTAEEEHLYGLAFAFLIARAFSSGCA
ALTGVEAISNGVPAFRKPKSRNAATTLLLLGMIAITLLMGIIMLAQKVGVVYAHDTDNLVGAPDDYHQKTLIAQLAEAVF
HDFPVGFYFVTAVTALILVLAANTAFNGFPVLGSILAQDRYLPRQLHTRGDRLAFSNGILFLSGAAIAFVVVFGAEVTKL
IQLYIVGVFVSFVLSQTGMLRHWTRLLRTETDPAQRARMQRSRVINAVGLTATGTVLVIVLVTKFFAGAWIAILTMAAIF
VLMKMIRRHYDSVSKELDEHDWDGVLPSRSHAIVLVSKLHLPTRRALAYARATRPDTLEAVTVNVDEADTRELVREWERS
DITVPLKVVESPYREITKPVLDYVKRVRRDAPRDVVTVFIPEYVVGHWWEQVLHNQSALRLKGRLLFEPGVMVTSVPWQL
SSSTRAKQTADVNAPGAVRRGYGDRP
>Mature_666_residues
MLAPVSKLTTAAKRVLLGRPFRSDSLGHTLLPKRIALPVFASDAMSSVAYAPEEIFLMLSVAGVSAYLYAPWVGLAVAFV
MAVVVASYRQNVHAYPSGGGDYEVATTNIGPNAGLTVGSALLVDYVLTVAVSISSAASNIGSAIPFVATHKVLFAVVAIA
LLTAVNLRGVRESGTAFAIPTYAFMFGMFLMLGWGLIEVYVFGEDLRAESAGFGLTAEEEHLYGLAFAFLIARAFSSGCA
ALTGVEAISNGVPAFRKPKSRNAATTLLLLGMIAITLLMGIIMLAQKVGVVYAHDTDNLVGAPDDYHQKTLIAQLAEAVF
HDFPVGFYFVTAVTALILVLAANTAFNGFPVLGSILAQDRYLPRQLHTRGDRLAFSNGILFLSGAAIAFVVVFGAEVTKL
IQLYIVGVFVSFVLSQTGMLRHWTRLLRTETDPAQRARMQRSRVINAVGLTATGTVLVIVLVTKFFAGAWIAILTMAAIF
VLMKMIRRHYDSVSKELDEHDWDGVLPSRSHAIVLVSKLHLPTRRALAYARATRPDTLEAVTVNVDEADTRELVREWERS
DITVPLKVVESPYREITKPVLDYVKRVRRDAPRDVVTVFIPEYVVGHWWEQVLHNQSALRLKGRLLFEPGVMVTSVPWQL
SSSTRAKQTADVNAPGAVRRGYGDRP

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72410; Mature: 72410

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPVSKLTTAAKRVLLGRPFRSDSLGHTLLPKRIALPVFASDAMSSVAYAPEEIFLMLS
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHH
VAGVSAYLYAPWVGLAVAFVMAVVVASYRQNVHAYPSGGGDYEVATTNIGPNAGLTVGSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHH
LLVDYVLTVAVSISSAASNIGSAIPFVATHKVLFAVVAIALLTAVNLRGVRESGTAFAIP
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHH
TYAFMFGMFLMLGWGLIEVYVFGEDLRAESAGFGLTAEEEHLYGLAFAFLIARAFSSGCA
HHHHHHHHHHHHHHHHHEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
ALTGVEAISNGVPAFRKPKSRNAATTLLLLGMIAITLLMGIIMLAQKVGVVYAHDTDNLV
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC
GAPDDYHQKTLIAQLAEAVFHDFPVGFYFVTAVTALILVLAANTAFNGFPVLGSILAQDR
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
YLPRQLHTRGDRLAFSNGILFLSGAAIAFVVVFGAEVTKLIQLYIVGVFVSFVLSQTGML
CCHHHHHCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RHWTRLLRTETDPAQRARMQRSRVINAVGLTATGTVLVIVLVTKFFAGAWIAILTMAAIF
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLMKMIRRHYDSVSKELDEHDWDGVLPSRSHAIVLVSKLHLPTRRALAYARATRPDTLEA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHCCCCCCEEE
VTVNVDEADTRELVREWERSDITVPLKVVESPYREITKPVLDYVKRVRRDAPRDVVTVFI
EEEECCCHHHHHHHHHHHHCCCEEEHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHEEHHH
PEYVVGHWWEQVLHNQSALRLKGRLLFEPGVMVTSVPWQLSSSTRAKQTADVNAPGAVRR
HHHHHHHHHHHHHCCCHHHEECCEEEECCCCEEEECCCCCCCCCCCHHCCCCCCCCHHHC
GYGDRP
CCCCCC
>Mature Secondary Structure
MLAPVSKLTTAAKRVLLGRPFRSDSLGHTLLPKRIALPVFASDAMSSVAYAPEEIFLMLS
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHH
VAGVSAYLYAPWVGLAVAFVMAVVVASYRQNVHAYPSGGGDYEVATTNIGPNAGLTVGSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHH
LLVDYVLTVAVSISSAASNIGSAIPFVATHKVLFAVVAIALLTAVNLRGVRESGTAFAIP
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHH
TYAFMFGMFLMLGWGLIEVYVFGEDLRAESAGFGLTAEEEHLYGLAFAFLIARAFSSGCA
HHHHHHHHHHHHHHHHHEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
ALTGVEAISNGVPAFRKPKSRNAATTLLLLGMIAITLLMGIIMLAQKVGVVYAHDTDNLV
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC
GAPDDYHQKTLIAQLAEAVFHDFPVGFYFVTAVTALILVLAANTAFNGFPVLGSILAQDR
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
YLPRQLHTRGDRLAFSNGILFLSGAAIAFVVVFGAEVTKLIQLYIVGVFVSFVLSQTGML
CCHHHHHCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RHWTRLLRTETDPAQRARMQRSRVINAVGLTATGTVLVIVLVTKFFAGAWIAILTMAAIF
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLMKMIRRHYDSVSKELDEHDWDGVLPSRSHAIVLVSKLHLPTRRALAYARATRPDTLEA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHCCCCCCEEE
VTVNVDEADTRELVREWERSDITVPLKVVESPYREITKPVLDYVKRVRRDAPRDVVTVFI
EEEECCCHHHHHHHHHHHHCCCEEEHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHEEHHH
PEYVVGHWWEQVLHNQSALRLKGRLLFEPGVMVTSVPWQLSSSTRAKQTADVNAPGAVRR
HHHHHHHHHHHHHCCCHHHEECCEEEECCCCEEEECCCCCCCCCCCHHCCCCCCCCHHHC
GYGDRP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]