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The map label for this gene is sun [C]

Identifier: 54025577

GI number: 54025577

Start: 3817017

End: 3818900

Strand: Reverse

Name: sun [C]

Synonym: nfa36070

Alternate gene names: 54025577

Gene position: 3818900-3817017 (Counterclockwise)

Preceding gene: 54025578

Following gene: 54025576

Centisome position: 63.42

GC content: 76.49

Gene sequence:

>1884_bases
GTGAGCGCCGCCGAGCGTCCGAGAAAGGCCGACGACCGCGACATCGACGGCGGGTGGGCCCGTCGCGCCGCCCGCGAGCA
GGAAGCCCGCCGGTCCGGGCGCAAGCCCGGTGACGGGGAGCCGCCGGAGTCCCGGCACCGAGCCGGTGGGGACCGTGGAC
GCGGTGCGCCCGGCCGGTCGGAGGGACGCGGCGGGCGCGCGGGCGAGCCACGGGCGCCACGCGCGGACCGCGCCGGTGGT
CGCGGCGCCGAGCGTGGTCGTACCGGCGGGGCGGGCGGCGCGCGGGACGAGCGGTCGCCGCGCGGAGAACGGGGCGGAAT
CCCGCGCCGGGAGCGGGAGTCACGCGGTGACGCGAGGTCGGACGCCGCGCGGGGGTCGTCGACCGCGAGATCCGGGCGCG
CGACGCCGGGCCCGGGCTCCGGCAACCAGCACGGTGGGCGCCGTGGCCCGGACGGCGGCTCCGGAGCGGGCGGTCGCTCC
CGCGCGGCCGACGCCGATCGGCGCAGCGCGGGGCGACCGGGGCGCACCGGACCGAAGAACGCCGCGGGCCGGAGCATCGA
TCCACCGCGCGAGGTGGCGCTCGAGGTGTTGCGGGCGGTGCGCGAACGTGCCGCCTACGCCAACCTCGTCCTCCCGAAGC
TGTTGCGCGACAGGCGCATCGACGGGCGGGACGCCGCGCTGGCGACCGAGCTCGCCTACGGTGCCTGCCGCGCGCAGGGG
CTGCTCGACGCCGTCATCGCGGCGTGCGCGGGACGGCCGGTCGCGCAGATCGACGGGCCGCTGCTCGATGTGCTGCGGTT
GGGGGTCTACCAGCTGCTGCGCACCCGGATCGGCGCGCACGCGGCGGTCGACACCTCGGTGGGCTTGGCGCGCGCCGAAT
TCGGCGCGGGCAAGTCCGGATTCGTGAACGCGGTCCTGCGGCAGGCGGCGCGGCGCACGGCGCAGGAATGGGTCGAGGAA
CTCGCCCCGGCCGACCCGATCGGCAAGCTGGCCTTCGAGTACGCGCATCCGGTGTGGATCGCGCAAGCGTTCGCCGATGC
GCTGGGCGCGCGAGCCACCGAACTGCCGGAGCTGCTCGCCGCCGACGACGCACGGCCCACCGTGCATCTGGTGGCACGCC
CCGGCGAGATCACCGCCGAGGAACTGGCGTTGGTGACCGGCGGGGAGGAAGGCCGCTGGTCCCCGTACGCGGTGTACCTG
GAGGGCGGCGACCCGGGCGGGCTGGAGCCGGTGCGCGAGGGAATGGCGGCGGTGCAGGACGAGGGCAGCCAGCTGGTCGC
GCTCAGCCTCACCCGCGCTCCGCTGGACGGTCCCGACACCGGCCGGTGGCTCGACCTGTGCGCCGGGCCCGGCGGCAAGG
CCGCGCTGCTGGGTGCGCTGGCCGCGATCGACGGCTTCGAGGTCGACGCCGTCGAACCCGCCGAACACCGCGCCGAGCTG
GTGCGCACGGCGACCAGGGAGCTGCCGGTGCGGGTCCACGTGGCCGACGGCAGGGACAGCGGGCTGTCCCCCGGCTACGA
CCGGATTCTCGTGGACGCGCCCTGCACCGGTCTCGGCGCGTTGCGGCGCAGGCCGGAAGCCCGCTGGCGGCGCGGGCCGG
AGGATCTGCGCGACCTGGTCCGCCTGCAACGCGAATTGCTCACCGCCGCATGGGATCTGCTGCGGCCTGGCGGGGTCGTG
GTGTACTCGACCTGTTCACCGCACCTGGCGGAGACGGTATCGGTGGTGGCCGATCTGGTCCGCCGGACCGACGCCGAGCA
ACTCGACACCAGGGACCTGCTGCCGGGAGTGTCCGACGTCGGTGACGGGCCCGCGGCGCAGCTGTGGCCGCACCGGCACG
GCACCGACGCCATGTTCATGGCGGCCCTGCGCAAGCCGCGCTAG

Upstream 100 bases:

>100_bases
CCGCCGTCCGCTTGGACAAGGTGCAGCCCCAGGGCAAGAAGATGATGCCCGCCCTCGACTGGGCCCGCGGCGCCCGCCTA
CAGCCCGGCGCGGTGGTCGA

Downstream 100 bases:

>100_bases
ACCGGCCGTTCCATTCGTCCAAGCCGGTCCTCGCGCGGGCCGGGCACACTGGCAGCATGACGCTGACCTGGCAGGACGTG
GTGACGATGGCGACCGAGCT

Product: putative RNA-binding Sun protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 627; Mature: 626

Protein sequence:

>627_residues
MSAAERPRKADDRDIDGGWARRAAREQEARRSGRKPGDGEPPESRHRAGGDRGRGAPGRSEGRGGRAGEPRAPRADRAGG
RGAERGRTGGAGGARDERSPRGERGGIPRRERESRGDARSDAARGSSTARSGRATPGPGSGNQHGGRRGPDGGSGAGGRS
RAADADRRSAGRPGRTGPKNAAGRSIDPPREVALEVLRAVRERAAYANLVLPKLLRDRRIDGRDAALATELAYGACRAQG
LLDAVIAACAGRPVAQIDGPLLDVLRLGVYQLLRTRIGAHAAVDTSVGLARAEFGAGKSGFVNAVLRQAARRTAQEWVEE
LAPADPIGKLAFEYAHPVWIAQAFADALGARATELPELLAADDARPTVHLVARPGEITAEELALVTGGEEGRWSPYAVYL
EGGDPGGLEPVREGMAAVQDEGSQLVALSLTRAPLDGPDTGRWLDLCAGPGGKAALLGALAAIDGFEVDAVEPAEHRAEL
VRTATRELPVRVHVADGRDSGLSPGYDRILVDAPCTGLGALRRRPEARWRRGPEDLRDLVRLQRELLTAAWDLLRPGGVV
VYSTCSPHLAETVSVVADLVRRTDAEQLDTRDLLPGVSDVGDGPAAQLWPHRHGTDAMFMAALRKPR

Sequences:

>Translated_627_residues
MSAAERPRKADDRDIDGGWARRAAREQEARRSGRKPGDGEPPESRHRAGGDRGRGAPGRSEGRGGRAGEPRAPRADRAGG
RGAERGRTGGAGGARDERSPRGERGGIPRRERESRGDARSDAARGSSTARSGRATPGPGSGNQHGGRRGPDGGSGAGGRS
RAADADRRSAGRPGRTGPKNAAGRSIDPPREVALEVLRAVRERAAYANLVLPKLLRDRRIDGRDAALATELAYGACRAQG
LLDAVIAACAGRPVAQIDGPLLDVLRLGVYQLLRTRIGAHAAVDTSVGLARAEFGAGKSGFVNAVLRQAARRTAQEWVEE
LAPADPIGKLAFEYAHPVWIAQAFADALGARATELPELLAADDARPTVHLVARPGEITAEELALVTGGEEGRWSPYAVYL
EGGDPGGLEPVREGMAAVQDEGSQLVALSLTRAPLDGPDTGRWLDLCAGPGGKAALLGALAAIDGFEVDAVEPAEHRAEL
VRTATRELPVRVHVADGRDSGLSPGYDRILVDAPCTGLGALRRRPEARWRRGPEDLRDLVRLQRELLTAAWDLLRPGGVV
VYSTCSPHLAETVSVVADLVRRTDAEQLDTRDLLPGVSDVGDGPAAQLWPHRHGTDAMFMAALRKPR
>Mature_626_residues
SAAERPRKADDRDIDGGWARRAAREQEARRSGRKPGDGEPPESRHRAGGDRGRGAPGRSEGRGGRAGEPRAPRADRAGGR
GAERGRTGGAGGARDERSPRGERGGIPRRERESRGDARSDAARGSSTARSGRATPGPGSGNQHGGRRGPDGGSGAGGRSR
AADADRRSAGRPGRTGPKNAAGRSIDPPREVALEVLRAVRERAAYANLVLPKLLRDRRIDGRDAALATELAYGACRAQGL
LDAVIAACAGRPVAQIDGPLLDVLRLGVYQLLRTRIGAHAAVDTSVGLARAEFGAGKSGFVNAVLRQAARRTAQEWVEEL
APADPIGKLAFEYAHPVWIAQAFADALGARATELPELLAADDARPTVHLVARPGEITAEELALVTGGEEGRWSPYAVYLE
GGDPGGLEPVREGMAAVQDEGSQLVALSLTRAPLDGPDTGRWLDLCAGPGGKAALLGALAAIDGFEVDAVEPAEHRAELV
RTATRELPVRVHVADGRDSGLSPGYDRILVDAPCTGLGALRRRPEARWRRGPEDLRDLVRLQRELLTAAWDLLRPGGVVV
YSTCSPHLAETVSVVADLVRRTDAEQLDTRDLLPGVSDVGDGPAAQLWPHRHGTDAMFMAALRKPR

Specific function: May act as RNA methyltransferase [H]

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=327, Percent_Identity=26.9113149847095, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI76150623, Length=327, Percent_Identity=26.9113149847095, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI32698918, Length=168, Percent_Identity=33.9285714285714, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI2367212, Length=435, Percent_Identity=32.4137931034483, Blast_Score=150, Evalue=3e-37,
Organism=Escherichia coli, GI87081985, Length=225, Percent_Identity=31.1111111111111, Blast_Score=83, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17536757, Length=347, Percent_Identity=27.6657060518732, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25143471, Length=189, Percent_Identity=33.8624338624339, Blast_Score=67, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324268, Length=218, Percent_Identity=28.4403669724771, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI22024126, Length=340, Percent_Identity=26.4705882352941, Blast_Score=93, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 66214; Mature: 66083

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAERPRKADDRDIDGGWARRAAREQEARRSGRKPGDGEPPESRHRAGGDRGRGAPGRS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
EGRGGRAGEPRAPRADRAGGRGAERGRTGGAGGARDERSPRGERGGIPRRERESRGDARS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHH
DAARGSSTARSGRATPGPGSGNQHGGRRGPDGGSGAGGRSRAADADRRSAGRPGRTGPKN
HHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
AAGRSIDPPREVALEVLRAVRERAAYANLVLPKLLRDRRIDGRDAALATELAYGACRAQG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LLDAVIAACAGRPVAQIDGPLLDVLRLGVYQLLRTRIGAHAAVDTSVGLARAEFGAGKSG
HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHH
FVNAVLRQAARRTAQEWVEELAPADPIGKLAFEYAHPVWIAQAFADALGARATELPELLA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ADDARPTVHLVARPGEITAEELALVTGGEEGRWSPYAVYLEGGDPGGLEPVREGMAAVQD
CCCCCCEEEEEECCCCCCHHHEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC
EGSQLVALSLTRAPLDGPDTGRWLDLCAGPGGKAALLGALAAIDGFEVDAVEPAEHRAEL
CCCEEEEEEEECCCCCCCCCCCEEHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
VRTATRELPVRVHVADGRDSGLSPGYDRILVDAPCTGLGALRRRPEARWRRGPEDLRDLV
HHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHCCCHHHHHHHH
RLQRELLTAAWDLLRPGGVVVYSTCSPHLAETVSVVADLVRRTDAEQLDTRDLLPGVSDV
HHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHC
GDGPAAQLWPHRHGTDAMFMAALRKPR
CCCCHHHCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SAAERPRKADDRDIDGGWARRAAREQEARRSGRKPGDGEPPESRHRAGGDRGRGAPGRS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
EGRGGRAGEPRAPRADRAGGRGAERGRTGGAGGARDERSPRGERGGIPRRERESRGDARS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHH
DAARGSSTARSGRATPGPGSGNQHGGRRGPDGGSGAGGRSRAADADRRSAGRPGRTGPKN
HHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
AAGRSIDPPREVALEVLRAVRERAAYANLVLPKLLRDRRIDGRDAALATELAYGACRAQG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LLDAVIAACAGRPVAQIDGPLLDVLRLGVYQLLRTRIGAHAAVDTSVGLARAEFGAGKSG
HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHH
FVNAVLRQAARRTAQEWVEELAPADPIGKLAFEYAHPVWIAQAFADALGARATELPELLA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ADDARPTVHLVARPGEITAEELALVTGGEEGRWSPYAVYLEGGDPGGLEPVREGMAAVQD
CCCCCCEEEEEECCCCCCHHHEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC
EGSQLVALSLTRAPLDGPDTGRWLDLCAGPGGKAALLGALAAIDGFEVDAVEPAEHRAEL
CCCEEEEEEEECCCCCCCCCCCEEHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
VRTATRELPVRVHVADGRDSGLSPGYDRILVDAPCTGLGALRRRPEARWRRGPEDLRDLV
HHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHCCCHHHHHHHH
RLQRELLTAAWDLLRPGGVVVYSTCSPHLAETVSVVADLVRRTDAEQLDTRDLLPGVSDV
HHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHC
GDGPAAQLWPHRHGTDAMFMAALRKPR
CCCCHHHCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]