| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025576
Identifier: 54025576
GI number: 54025576
Start: 3816604
End: 3816960
Strand: Reverse
Name: 54025576
Synonym: nfa36060
Alternate gene names: NA
Gene position: 3816960-3816604 (Counterclockwise)
Preceding gene: 54025577
Following gene: 54025573
Centisome position: 63.39
GC content: 74.51
Gene sequence:
>357_bases ATGACGCTGACCTGGCAGGACGTGGTGACGATGGCGACCGAGCTGCCCGAGGTCGCCGAGTCGACGTGGTGGCGCTCGCC CGGGTTGAAGGTGGCGGGCAAGGGCTTCGCGCGGCTGCGGGTGGAGGCCGAGGGCGGGCTGGCGCTGCGCTGCGACCTGG CGGAGAAGCACGCGCTGCTCGCCTCCGGCGACCCGGCGTTCTACACCACCCCGCACTACGACGGCAGCCCCTATATCCTC GTCGACCTGGATCGGGTCGACGAGGGCCGGCTGCGCGAGCTGCTCGACGCCGCCTGGTGGCTCGCCGCTCCCGCCGCCGC CCGCCGCAGGCGCGAACGCGCGGCCGACACCGCCTAG
Upstream 100 bases:
>100_bases GCACCGACGCCATGTTCATGGCGGCCCTGCGCAAGCCGCGCTAGACCGGCCGTTCCATTCGTCCAAGCCGGTCCTCGCGC GGGCCGGGCACACTGGCAGC
Downstream 100 bases:
>100_bases CCGGGCTCGTCGGTCGGCGGCCTCACTCGCGGGCGGAGAGTTCGCGCAGCCGGGCGAGGGTCTTGGCCAGGATGCGGGAG ACGTGCATCTGCGAGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTLTWQDVVTMATELPEVAESTWWRSPGLKVAGKGFARLRVEAEGGLALRCDLAEKHALLASGDPAFYTTPHYDGSPYIL VDLDRVDEGRLRELLDAAWWLAAPAAARRRRERAADTA
Sequences:
>Translated_118_residues MTLTWQDVVTMATELPEVAESTWWRSPGLKVAGKGFARLRVEAEGGLALRCDLAEKHALLASGDPAFYTTPHYDGSPYIL VDLDRVDEGRLRELLDAAWWLAAPAAARRRRERAADTA >Mature_117_residues TLTWQDVVTMATELPEVAESTWWRSPGLKVAGKGFARLRVEAEGGLALRCDLAEKHALLASGDPAFYTTPHYDGSPYILV DLDRVDEGRLRELLDAAWWLAAPAAARRRRERAADTA
Specific function: Unknown
COG id: COG3801
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13080; Mature: 12949
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTWQDVVTMATELPEVAESTWWRSPGLKVAGKGFARLRVEAEGGLALRCDLAEKHALL CCCCHHHHHHHHHHCHHHHHHHCCCCCCCEECCCCEEEEEEECCCCEEEEECCCCCCEEE ASGDPAFYTTPHYDGSPYILVDLDRVDEGRLRELLDAAWWLAAPAAARRRRERAADTA ECCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure TLTWQDVVTMATELPEVAESTWWRSPGLKVAGKGFARLRVEAEGGLALRCDLAEKHALL CCCHHHHHHHHHHCHHHHHHHCCCCCCCEECCCCEEEEEEECCCCEEEEECCCCCCEEE ASGDPAFYTTPHYDGSPYILVDLDRVDEGRLRELLDAAWWLAAPAAARRRRERAADTA ECCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA