Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025576

Identifier: 54025576

GI number: 54025576

Start: 3816604

End: 3816960

Strand: Reverse

Name: 54025576

Synonym: nfa36060

Alternate gene names: NA

Gene position: 3816960-3816604 (Counterclockwise)

Preceding gene: 54025577

Following gene: 54025573

Centisome position: 63.39

GC content: 74.51

Gene sequence:

>357_bases
ATGACGCTGACCTGGCAGGACGTGGTGACGATGGCGACCGAGCTGCCCGAGGTCGCCGAGTCGACGTGGTGGCGCTCGCC
CGGGTTGAAGGTGGCGGGCAAGGGCTTCGCGCGGCTGCGGGTGGAGGCCGAGGGCGGGCTGGCGCTGCGCTGCGACCTGG
CGGAGAAGCACGCGCTGCTCGCCTCCGGCGACCCGGCGTTCTACACCACCCCGCACTACGACGGCAGCCCCTATATCCTC
GTCGACCTGGATCGGGTCGACGAGGGCCGGCTGCGCGAGCTGCTCGACGCCGCCTGGTGGCTCGCCGCTCCCGCCGCCGC
CCGCCGCAGGCGCGAACGCGCGGCCGACACCGCCTAG

Upstream 100 bases:

>100_bases
GCACCGACGCCATGTTCATGGCGGCCCTGCGCAAGCCGCGCTAGACCGGCCGTTCCATTCGTCCAAGCCGGTCCTCGCGC
GGGCCGGGCACACTGGCAGC

Downstream 100 bases:

>100_bases
CCGGGCTCGTCGGTCGGCGGCCTCACTCGCGGGCGGAGAGTTCGCGCAGCCGGGCGAGGGTCTTGGCCAGGATGCGGGAG
ACGTGCATCTGCGAGATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTLTWQDVVTMATELPEVAESTWWRSPGLKVAGKGFARLRVEAEGGLALRCDLAEKHALLASGDPAFYTTPHYDGSPYIL
VDLDRVDEGRLRELLDAAWWLAAPAAARRRRERAADTA

Sequences:

>Translated_118_residues
MTLTWQDVVTMATELPEVAESTWWRSPGLKVAGKGFARLRVEAEGGLALRCDLAEKHALLASGDPAFYTTPHYDGSPYIL
VDLDRVDEGRLRELLDAAWWLAAPAAARRRRERAADTA
>Mature_117_residues
TLTWQDVVTMATELPEVAESTWWRSPGLKVAGKGFARLRVEAEGGLALRCDLAEKHALLASGDPAFYTTPHYDGSPYILV
DLDRVDEGRLRELLDAAWWLAAPAAARRRRERAADTA

Specific function: Unknown

COG id: COG3801

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13080; Mature: 12949

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTWQDVVTMATELPEVAESTWWRSPGLKVAGKGFARLRVEAEGGLALRCDLAEKHALL
CCCCHHHHHHHHHHCHHHHHHHCCCCCCCEECCCCEEEEEEECCCCEEEEECCCCCCEEE
ASGDPAFYTTPHYDGSPYILVDLDRVDEGRLRELLDAAWWLAAPAAARRRRERAADTA
ECCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLTWQDVVTMATELPEVAESTWWRSPGLKVAGKGFARLRVEAEGGLALRCDLAEKHALL
CCCHHHHHHHHHHCHHHHHHHCCCCCCCEECCCCEEEEEEECCCCEEEEECCCCCCEEE
ASGDPAFYTTPHYDGSPYILVDLDRVDEGRLRELLDAAWWLAAPAAARRRRERAADTA
ECCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA