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The map label for this gene is 54025517

Identifier: 54025517

GI number: 54025517

Start: 3759291

End: 3759875

Strand: Reverse

Name: 54025517

Synonym: nfa35470

Alternate gene names: NA

Gene position: 3759875-3759291 (Counterclockwise)

Preceding gene: 54025523

Following gene: 54025516

Centisome position: 62.44

GC content: 70.94

Gene sequence:

>585_bases
ATGCCAGGGCTCACCACCGCGGGTTTCGCGACCAGACGTCGCACCCAGTTGTTCGACGCGCTGGTCGACCTGTTCCTCGC
CGAGGGCTTCGCCCACCTCACCCTCGACGAGATCGCCCGGCGGCTGCGCTGCTCCAAGTCCACCCTCTACACCCTCGCCG
ACAGCAAGGAACAGCTGGTCAAGGCCGCGACCGTGCACTTCTTCCGGCGCGCCACCGACGACGTCGAGTCCCGCATCCGG
GACATCGACAGCGCCCGCGAGCAGATCACCGCCTACCTGTCCGCGGTCGGCACCACCCTGGCCGGCGCCTCGGAACGGTT
CATGGCCGACCTGGACACCTTCGCCCCCGCCCGTGAGGTCTACGAGCGCAACACCAGGATCGCGGCCCGCCGCGTCCGCG
AACTCGTCGACGACGGCGTCGCGCGCGGCGAGTTCCGCGACGTGCACGCCGCCTTCGCCGCCGACCTCGTGGCCACCATG
ATGGTCCGCATCCAGCAGGGTGGGGTCCGGGCGAGCACCGGCCTCGACGACGCCCACGCCTACCGCGAACTCGCCGCCAT
CCTCACCGCGGGCATCAGCGCCTGA

Upstream 100 bases:

>100_bases
GATCTCTCCTCGGTGGGCAACGGGAAACAGTACTGGGTTACCAAGCACAGTACTGTTCGCGTGACAGTACTGCAAGACGC
TCTCCAGTACCATCGACCCC

Downstream 100 bases:

>100_bases
ATCCCGGCCGCGCGGGCGGACGCCGTGGCAGCCGATACGCTGTGCACTTTCGGGCAGTCGAACGGGAAACGGGTGAGCGC
ATGGGAGCCGAGCCGAACAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator; Transcriptional Regulator TetR Family; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPGLTTAGFATRRRTQLFDALVDLFLAEGFAHLTLDEIARRLRCSKSTLYTLADSKEQLVKAATVHFFRRATDDVESRIR
DIDSAREQITAYLSAVGTTLAGASERFMADLDTFAPAREVYERNTRIAARRVRELVDDGVARGEFRDVHAAFAADLVATM
MVRIQQGGVRASTGLDDAHAYRELAAILTAGISA

Sequences:

>Translated_194_residues
MPGLTTAGFATRRRTQLFDALVDLFLAEGFAHLTLDEIARRLRCSKSTLYTLADSKEQLVKAATVHFFRRATDDVESRIR
DIDSAREQITAYLSAVGTTLAGASERFMADLDTFAPAREVYERNTRIAARRVRELVDDGVARGEFRDVHAAFAADLVATM
MVRIQQGGVRASTGLDDAHAYRELAAILTAGISA
>Mature_193_residues
PGLTTAGFATRRRTQLFDALVDLFLAEGFAHLTLDEIARRLRCSKSTLYTLADSKEQLVKAATVHFFRRATDDVESRIRD
IDSAREQITAYLSAVGTTLAGASERFMADLDTFAPAREVYERNTRIAARRVRELVDDGVARGEFRDVHAAFAADLVATMM
VRIQQGGVRASTGLDDAHAYRELAAILTAGISA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21326; Mature: 21195

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGLTTAGFATRRRTQLFDALVDLFLAEGFAHLTLDEIARRLRCSKSTLYTLADSKEQLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KAATVHFFRRATDDVESRIRDIDSAREQITAYLSAVGTTLAGASERFMADLDTFAPAREV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YERNTRIAARRVRELVDDGVARGEFRDVHAAFAADLVATMMVRIQQGGVRASTGLDDAHA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
YRELAAILTAGISA
HHHHHHHHHHHCCC
>Mature Secondary Structure 
PGLTTAGFATRRRTQLFDALVDLFLAEGFAHLTLDEIARRLRCSKSTLYTLADSKEQLV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KAATVHFFRRATDDVESRIRDIDSAREQITAYLSAVGTTLAGASERFMADLDTFAPAREV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YERNTRIAARRVRELVDDGVARGEFRDVHAAFAADLVATMMVRIQQGGVRASTGLDDAHA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
YRELAAILTAGISA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA