| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025523
Identifier: 54025523
GI number: 54025523
Start: 3762903
End: 3763370
Strand: Reverse
Name: 54025523
Synonym: nfa35530
Alternate gene names: NA
Gene position: 3763370-3762903 (Counterclockwise)
Preceding gene: 54025524
Following gene: 54025517
Centisome position: 62.5
GC content: 74.36
Gene sequence:
>468_bases GTGCAGTTATCCGACGGCGTCATCAGTTTACGGCCGGCCACCGGGGCCGAGCGGTCTCCGATCGGCATCTCGCCGCCCGC GGCCGAGGCCGCCGAGGCCACCGGCGTCACCCCCGATCGGATCGCCGCGGAGGCGCCGATCGAGACCTTCGCGATCGTGC GGTCGGCCGACGAGGAGGTCGTCGGCACGCTCGGCGTCCGCGCCGAGGCGCCCTATCTGCACCGGGATCAGGCCGAATTG ACCTACGCGGTGGACCCGCAGTGGCGCGGGCGCGGGCTGGCCACGCGCGCGGTGGTGCTCGGCTGCCGGTATGTGGCCGC GGCGGGACTGGCCGAGGAGGTGGTCCTGCGGATCGACCCGGCGAACGCCGCCTCGGTGGCGGTCGCCCGCCGGGCCCGCT TCAAGTATCTGCGCAGCACCGACGTCGAGGGCGAGGGCCCGCTGGACTGGTACGCGCAGGCGGTGTGA
Upstream 100 bases:
>100_bases TGCGGCGCAGGTCGTGGTGGCCGACTGCACCGCCAACACGATCGGCTGAATCGGCGTGTCGCCGGTTTGATCCCATGACC GTGTTGCCGATCATGGTGGG
Downstream 100 bases:
>100_bases GTTACTCCGCGAACCGGCGCTCGTACTCCTCCCGGAGCCGGGCGTGCTTGGGCCAGAACGCTTCCGGTTCCCGTCCCGCC AGCCGTGCGGCCAGCAGGTC
Product: putative acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MQLSDGVISLRPATGAERSPIGISPPAAEAAEATGVTPDRIAAEAPIETFAIVRSADEEVVGTLGVRAEAPYLHRDQAEL TYAVDPQWRGRGLATRAVVLGCRYVAAAGLAEEVVLRIDPANAASVAVARRARFKYLRSTDVEGEGPLDWYAQAV
Sequences:
>Translated_155_residues MQLSDGVISLRPATGAERSPIGISPPAAEAAEATGVTPDRIAAEAPIETFAIVRSADEEVVGTLGVRAEAPYLHRDQAEL TYAVDPQWRGRGLATRAVVLGCRYVAAAGLAEEVVLRIDPANAASVAVARRARFKYLRSTDVEGEGPLDWYAQAV >Mature_155_residues MQLSDGVISLRPATGAERSPIGISPPAAEAAEATGVTPDRIAAEAPIETFAIVRSADEEVVGTLGVRAEAPYLHRDQAEL TYAVDPQWRGRGLATRAVVLGCRYVAAAGLAEEVVLRIDPANAASVAVARRARFKYLRSTDVEGEGPLDWYAQAV
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16399; Mature: 16399
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSDGVISLRPATGAERSPIGISPPAAEAAEATGVTPDRIAAEAPIETFAIVRSADEEV CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCHHHHHHHHCCCHHH VGTLGVRAEAPYLHRDQAELTYAVDPQWRGRGLATRAVVLGCRYVAAAGLAEEVVLRIDP HHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC ANAASVAVARRARFKYLRSTDVEGEGPLDWYAQAV CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECC >Mature Secondary Structure MQLSDGVISLRPATGAERSPIGISPPAAEAAEATGVTPDRIAAEAPIETFAIVRSADEEV CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCHHHHHHHHCCCHHH VGTLGVRAEAPYLHRDQAELTYAVDPQWRGRGLATRAVVLGCRYVAAAGLAEEVVLRIDP HHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC ANAASVAVARRARFKYLRSTDVEGEGPLDWYAQAV CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA