BacMap

Definition	Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession	NC_006361
Length	6,021,225

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The map label for this gene is gabD2 [H]

Identifier: 54025405

GI number: 54025405

Start: 3638996

End: 3640567

Strand: Reverse

Name: gabD2 [H]

Synonym: nfa34350

Alternate gene names: 54025405

Gene position: 3640567-3638996 (Counterclockwise)

Preceding gene: 54025407

Following gene: 54025404

Centisome position: 60.46

GC content: 72.52

Gene sequence:

>1572_bases
ATGCCGACCGCCCCCCTGCCTGCCCTCGACTCCGCGCTGCCCGCCGACCTGGTGAAGCCGTTGCTGGACCGCGCCGTCGC
GGGCGGCGCGGGCACGGTCGAGATGTTCGCGCCCGCCACCGGGCGCAAGATCGCCGATCTGCCCCAGTCCGCCACCGCCG
ACATCGAGCGGGCCTTCGCCACCGCGCGGGCGGCCCAGCGCGAGTGGGCCCGGCGGCCGGTGCGCGAGCGGGTCGCGGTG
CTGCGCAGCCTGCACGACATCGTGCTCGCCGAGCAGGACACCATCCTCGACATCGTGCAGACCGAGACCGGCAAGTCGCG
GGCACACGCGTTCGACGAGGTCGCCGACGTGGCGGTGAACGCGCGGTACTACGCCTCGGTCGCCGAGCGGCTGCTGGCGC
CCCGCAAGCCGCGCGGTGTCATGCCGGTGCTCACCCAGGTCGACGTGCTGCACCGGCCGAAGGGTGTGGTCGCGGTGATC
TCGCCGTGGAACTACCCGCTGGCACTGGCCGCCTCCGACGCGCTGCCCGCCCTGGTCGCGGGCAACGCCGTGATCGCCCG
CCCGGACAATCAGACCGCGCTCACCGCGCTGTGGGCGATCGACGCCGCCGAGCGGGCCGGACTGCCGAAGGGGCTGTGGC
AGGCGGTGCTCGGCCGGGGGTCGGTGATCGGCGGCGAGGTGATCGCGCGCGCCGACTACGTCGACTACACCGGTTCCAGC
GCGACCGGACGCACCATCGCCCAGCAGGCGGGGGAGCGGCTGATCGGCTACTCGCTCGAACTCGGCGGCAAGAATCCGCT
GCTGGTGCTCGACGACGCGGACGTGACGCGCGCGGCCAAGATCGCGGTGCGGGCGTGCTTCGCCTCGGCGGGGCAGCTGT
GCGAGTCGATCGAGCGGATCTACGTGCACGAGGCGGTGCACGACCGGTTCGTCGAGGAGTTCGTCGGCCACGTCCGGTCG
ATCCGGCTCGGCGGTGCCCTCGACTACAGTGCCGACATGGGGTCGTTGACCTTCCAGCGCCAGCTCGACACCGTGCGGGC
CCACGTCGACGACGCGGTCGCCAAGGGCGCGACCGTGCTGGCCGGTGGCCGCGCCCGCCCGGATCTGGGCCCCTACTTCT
ACGAACCGACGGTGCTCACCGACGTGACCGAGGAGATGACGGTCTACCGGGAGGAGACCTTCGGGCCGGTCGTCTCGATC
TACCGGGTCGCCGACGAGGACGCCGCGGTCGAGGCCGCCAACGACACCCCCTACGGTCTCAACGCCAGCGTGTGGACCAG
GGATGCCGAGCGCGGCCGCCGCGTCGCCGCCCGCATCCGCGCCGGGTCGGTGAACGTCAACGAGGGCTTCATCGCCGCCT
GGGGCAGCGCCGACGCGCCGTCGGGCGGGCTCGGTATCTCCGGCAACGGCCGCAGGCACGGCCCGGAAGGGCTGCTGAAG
TACGTCGACACCCAGACCATCGCGGTGCAGCGGGTGCTGCCGATCGCGCCGCTGCCCGGCATGTCCGAGCAGTTGTGGGC
CAAGACGATGACGCTCTACCTGGGCGTCATGAAGAAGCTGCGCCAGAAGTGA

Upstream 100 bases:

>100_bases
GGAGAGCTTGACAGGCGGCGCGTTCCAGCTATTAATCTAACACCACTGTTCAGTTAAACCCGACGCCTCCGTCTCCCGAG
ACCCCACGAGAGGGCCGCCG

Downstream 100 bases:

>100_bases
GAGGACGCCGTATGAAACTGGAGACGGTCGCGGGCAAGAAGGTGCTCGTCACCGGCGCCGCCATGGGCCTGGGCAAGTTG
TTCGCCGAGCGCGCGGTCCG

Product: succinic semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSADH 2; SSDH 2 [H]

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MPTAPLPALDSALPADLVKPLLDRAVAGGAGTVEMFAPATGRKIADLPQSATADIERAFATARAAQREWARRPVRERVAV
LRSLHDIVLAEQDTILDIVQTETGKSRAHAFDEVADVAVNARYYASVAERLLAPRKPRGVMPVLTQVDVLHRPKGVVAVI
SPWNYPLALAASDALPALVAGNAVIARPDNQTALTALWAIDAAERAGLPKGLWQAVLGRGSVIGGEVIARADYVDYTGSS
ATGRTIAQQAGERLIGYSLELGGKNPLLVLDDADVTRAAKIAVRACFASAGQLCESIERIYVHEAVHDRFVEEFVGHVRS
IRLGGALDYSADMGSLTFQRQLDTVRAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTDVTEEMTVYREETFGPVVSI
YRVADEDAAVEAANDTPYGLNASVWTRDAERGRRVAARIRAGSVNVNEGFIAAWGSADAPSGGLGISGNGRRHGPEGLLK
YVDTQTIAVQRVLPIAPLPGMSEQLWAKTMTLYLGVMKKLRQK

Sequences:

>Translated_523_residues
MPTAPLPALDSALPADLVKPLLDRAVAGGAGTVEMFAPATGRKIADLPQSATADIERAFATARAAQREWARRPVRERVAV
LRSLHDIVLAEQDTILDIVQTETGKSRAHAFDEVADVAVNARYYASVAERLLAPRKPRGVMPVLTQVDVLHRPKGVVAVI
SPWNYPLALAASDALPALVAGNAVIARPDNQTALTALWAIDAAERAGLPKGLWQAVLGRGSVIGGEVIARADYVDYTGSS
ATGRTIAQQAGERLIGYSLELGGKNPLLVLDDADVTRAAKIAVRACFASAGQLCESIERIYVHEAVHDRFVEEFVGHVRS
IRLGGALDYSADMGSLTFQRQLDTVRAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTDVTEEMTVYREETFGPVVSI
YRVADEDAAVEAANDTPYGLNASVWTRDAERGRRVAARIRAGSVNVNEGFIAAWGSADAPSGGLGISGNGRRHGPEGLLK
YVDTQTIAVQRVLPIAPLPGMSEQLWAKTMTLYLGVMKKLRQK
>Mature_522_residues
PTAPLPALDSALPADLVKPLLDRAVAGGAGTVEMFAPATGRKIADLPQSATADIERAFATARAAQREWARRPVRERVAVL
RSLHDIVLAEQDTILDIVQTETGKSRAHAFDEVADVAVNARYYASVAERLLAPRKPRGVMPVLTQVDVLHRPKGVVAVIS
PWNYPLALAASDALPALVAGNAVIARPDNQTALTALWAIDAAERAGLPKGLWQAVLGRGSVIGGEVIARADYVDYTGSSA
TGRTIAQQAGERLIGYSLELGGKNPLLVLDDADVTRAAKIAVRACFASAGQLCESIERIYVHEAVHDRFVEEFVGHVRSI
RLGGALDYSADMGSLTFQRQLDTVRAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTDVTEEMTVYREETFGPVVSIY
RVADEDAAVEAANDTPYGLNASVWTRDAERGRRVAARIRAGSVNVNEGFIAAWGSADAPSGGLGISGNGRRHGPEGLLKY
VDTQTIAVQRVLPIAPLPGMSEQLWAKTMTLYLGVMKKLRQK

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. Although it has succinate semialdehyde dehydrogenase activity, is likely to act physiologically on a different aldehyde(s) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI115387104, Length=479, Percent_Identity=33.1941544885177, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI25777724, Length=464, Percent_Identity=32.5431034482759, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI238814322, Length=434, Percent_Identity=32.7188940092166, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI21361176, Length=502, Percent_Identity=32.0717131474104, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI153266822, Length=460, Percent_Identity=31.5217391304348, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI12007648, Length=492, Percent_Identity=30.4878048780488, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI25777730, Length=497, Percent_Identity=31.58953722334, Blast_Score=229, Evalue=5e-60,
Organism=Homo sapiens, GI25777732, Length=461, Percent_Identity=32.9718004338395, Blast_Score=229, Evalue=5e-60,
Organism=Homo sapiens, GI21614513, Length=475, Percent_Identity=31.1578947368421, Blast_Score=229, Evalue=7e-60,
Organism=Homo sapiens, GI25777728, Length=420, Percent_Identity=32.8571428571429, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI4507229, Length=431, Percent_Identity=31.554524361949, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI25777726, Length=462, Percent_Identity=30.7359307359307, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI25777721, Length=444, Percent_Identity=30.6306306306306, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI25952152, Length=492, Percent_Identity=27.8455284552846, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI188035924, Length=482, Percent_Identity=26.7634854771784, Blast_Score=169, Evalue=7e-42,
Organism=Homo sapiens, GI310128103, Length=470, Percent_Identity=26.3829787234043, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI310128093, Length=465, Percent_Identity=26.4516129032258, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI301500698, Length=285, Percent_Identity=32.280701754386, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI11095441, Length=467, Percent_Identity=24.8394004282655, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI4502043, Length=412, Percent_Identity=28.8834951456311, Blast_Score=144, Evalue=3e-34,
Organism=Homo sapiens, GI238814371, Length=412, Percent_Identity=28.8834951456311, Blast_Score=144, Evalue=3e-34,
Organism=Homo sapiens, GI310128091, Length=465, Percent_Identity=25.5913978494624, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI73695881, Length=331, Percent_Identity=29.3051359516616, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI73695879, Length=331, Percent_Identity=29.3051359516616, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI4557303, Length=433, Percent_Identity=26.7898383371824, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI73466520, Length=433, Percent_Identity=27.2517321016166, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI71773324, Length=337, Percent_Identity=30.2670623145401, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI206597441, Length=453, Percent_Identity=26.9315673289183, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI206597439, Length=453, Percent_Identity=26.9315673289183, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI22907049, Length=453, Percent_Identity=26.9315673289183, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI25777736, Length=472, Percent_Identity=27.7542372881356, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI25777734, Length=472, Percent_Identity=27.7542372881356, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI238859541, Length=472, Percent_Identity=27.7542372881356, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI310128089, Length=255, Percent_Identity=28.2352941176471, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI310128097, Length=255, Percent_Identity=29.0196078431373, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI310128095, Length=254, Percent_Identity=27.5590551181102, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI223972651, Length=488, Percent_Identity=26.2295081967213, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI310128087, Length=282, Percent_Identity=26.241134751773, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI223972653, Length=485, Percent_Identity=24.3298969072165, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI1789015, Length=459, Percent_Identity=32.8976034858388, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI87081896, Length=468, Percent_Identity=34.6153846153846, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1786504, Length=472, Percent_Identity=35.1694915254237, Blast_Score=226, Evalue=3e-60,
Organism=Escherichia coli, GI1787684, Length=476, Percent_Identity=31.5126050420168, Blast_Score=220, Evalue=2e-58,
Organism=Escherichia coli, GI1787715, Length=478, Percent_Identity=32.2175732217573, Blast_Score=218, Evalue=8e-58,
Organism=Escherichia coli, GI1787558, Length=468, Percent_Identity=31.8376068376068, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI87081926, Length=456, Percent_Identity=32.4561403508772, Blast_Score=212, Evalue=4e-56,
Organism=Escherichia coli, GI87082295, Length=474, Percent_Identity=33.7552742616034, Blast_Score=207, Evalue=2e-54,
Organism=Escherichia coli, GI1788042, Length=450, Percent_Identity=30, Blast_Score=158, Evalue=1e-39,
Organism=Escherichia coli, GI1787250, Length=483, Percent_Identity=28.1573498964803, Blast_Score=153, Evalue=3e-38,
Organism=Escherichia coli, GI1787653, Length=380, Percent_Identity=23.4210526315789, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI133930964, Length=470, Percent_Identity=32.7659574468085, Blast_Score=244, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI25143876, Length=465, Percent_Identity=32.9032258064516, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI25143874, Length=465, Percent_Identity=32.9032258064516, Blast_Score=231, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17562198, Length=469, Percent_Identity=32.1961620469083, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17534119, Length=461, Percent_Identity=31.6702819956616, Blast_Score=218, Evalue=5e-57,
Organism=Caenorhabditis elegans, GI25144435, Length=469, Percent_Identity=31.7697228144989, Blast_Score=215, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI17551164, Length=467, Percent_Identity=30.1927194860814, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI32564736, Length=422, Percent_Identity=31.9905213270142, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71995606, Length=497, Percent_Identity=29.5774647887324, Blast_Score=187, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI115534176, Length=479, Percent_Identity=29.0187891440501, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI71995613, Length=408, Percent_Identity=29.1666666666667, Blast_Score=157, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17564084, Length=445, Percent_Identity=28.314606741573, Blast_Score=152, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI32566756, Length=446, Percent_Identity=27.1300448430493, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI25146391, Length=443, Percent_Identity=27.313769751693, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI25146394, Length=443, Percent_Identity=27.313769751693, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17534447, Length=454, Percent_Identity=28.1938325991189, Blast_Score=135, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI32564151, Length=397, Percent_Identity=27.9596977329975, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71986308, Length=423, Percent_Identity=24.3498817966903, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI115532534, Length=353, Percent_Identity=30.3116147308782, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71990744, Length=281, Percent_Identity=25.9786476868327, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319478, Length=471, Percent_Identity=32.2717622080679, Blast_Score=245, Evalue=1e-65,
Organism=Saccharomyces cerevisiae, GI6320917, Length=469, Percent_Identity=31.7697228144989, Blast_Score=237, Evalue=4e-63,
Organism=Saccharomyces cerevisiae, GI6323821, Length=474, Percent_Identity=31.4345991561181, Blast_Score=236, Evalue=6e-63,
Organism=Saccharomyces cerevisiae, GI6324950, Length=464, Percent_Identity=32.5431034482759, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6325196, Length=466, Percent_Identity=32.1888412017167, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6323822, Length=482, Percent_Identity=30.7053941908714, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6321828, Length=499, Percent_Identity=28.8577154308617, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6321826, Length=480, Percent_Identity=24.7916666666667, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6323757, Length=431, Percent_Identity=22.5058004640371, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281362580, Length=490, Percent_Identity=33.8775510204082, Blast_Score=268, Evalue=6e-72,
Organism=Drosophila melanogaster, GI62472918, Length=490, Percent_Identity=33.8775510204082, Blast_Score=268, Evalue=6e-72,
Organism=Drosophila melanogaster, GI62472926, Length=490, Percent_Identity=33.8775510204082, Blast_Score=268, Evalue=6e-72,
Organism=Drosophila melanogaster, GI62472936, Length=490, Percent_Identity=33.8775510204082, Blast_Score=268, Evalue=6e-72,
Organism=Drosophila melanogaster, GI21356737, Length=490, Percent_Identity=33.8775510204082, Blast_Score=268, Evalue=6e-72,
Organism=Drosophila melanogaster, GI24650465, Length=465, Percent_Identity=33.3333333333333, Blast_Score=239, Evalue=4e-63,
Organism=Drosophila melanogaster, GI20129399, Length=468, Percent_Identity=32.4786324786325, Blast_Score=235, Evalue=5e-62,
Organism=Drosophila melanogaster, GI24585660, Length=475, Percent_Identity=29.2631578947368, Blast_Score=225, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24666674, Length=487, Percent_Identity=27.9260780287474, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI281360301, Length=365, Percent_Identity=28.7671232876712, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360299, Length=371, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360297, Length=371, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360295, Length=371, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24586250, Length=371, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360303, Length=365, Percent_Identity=28.4931506849315, Blast_Score=138, Evalue=8e-33,
Organism=Drosophila melanogaster, GI45552499, Length=371, Percent_Identity=28.3018867924528, Blast_Score=138, Evalue=9e-33,
Organism=Drosophila melanogaster, GI24638876, Length=493, Percent_Identity=23.5294117647059, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24638878, Length=493, Percent_Identity=23.5294117647059, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24668425, Length=472, Percent_Identity=25.635593220339, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24668417, Length=472, Percent_Identity=25.635593220339, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24668413, Length=472, Percent_Identity=25.635593220339, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI28571806, Length=357, Percent_Identity=26.0504201680672, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571802, Length=357, Percent_Identity=26.0504201680672, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571800, Length=357, Percent_Identity=26.0504201680672, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571798, Length=357, Percent_Identity=26.0504201680672, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571796, Length=357, Percent_Identity=26.0504201680672, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571794, Length=357, Percent_Identity=26.0504201680672, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28574525, Length=448, Percent_Identity=24.7767857142857, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI281360293, Length=178, Percent_Identity=30.3370786516854, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 55934; Mature: 55803

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAPLPALDSALPADLVKPLLDRAVAGGAGTVEMFAPATGRKIADLPQSATADIERAFA
CCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCHHHHHHHHHHH
TARAAQREWARRPVRERVAVLRSLHDIVLAEQDTILDIVQTETGKSRAHAFDEVADVAVN
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
ARYYASVAERLLAPRKPRGVMPVLTQVDVLHRPKGVVAVISPWNYPLALAASDALPALVA
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHC
GNAVIARPDNQTALTALWAIDAAERAGLPKGLWQAVLGRGSVIGGEVIARADYVDYTGSS
CCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCHHHEEECCCCCCCCC
ATGRTIAQQAGERLIGYSLELGGKNPLLVLDDADVTRAAKIAVRACFASAGQLCESIERI
CCCHHHHHHHCCHHCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YVHEAVHDRFVEEFVGHVRSIRLGGALDYSADMGSLTFQRQLDTVRAHVDDAVAKGATVL
HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE
AGGRARPDLGPYFYEPTVLTDVTEEMTVYREETFGPVVSIYRVADEDAAVEAANDTPYGL
ECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEECCCCCCCC
NASVWTRDAERGRRVAARIRAGSVNVNEGFIAAWGSADAPSGGLGISGNGRRHGPEGLLK
CCHHCCCCHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
YVDTQTIAVQRVLPIAPLPGMSEQLWAKTMTLYLGVMKKLRQK
HHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTAPLPALDSALPADLVKPLLDRAVAGGAGTVEMFAPATGRKIADLPQSATADIERAFA
CCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCHHHHHHHHHHH
TARAAQREWARRPVRERVAVLRSLHDIVLAEQDTILDIVQTETGKSRAHAFDEVADVAVN
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
ARYYASVAERLLAPRKPRGVMPVLTQVDVLHRPKGVVAVISPWNYPLALAASDALPALVA
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHC
GNAVIARPDNQTALTALWAIDAAERAGLPKGLWQAVLGRGSVIGGEVIARADYVDYTGSS
CCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCHHHEEECCCCCCCCC
ATGRTIAQQAGERLIGYSLELGGKNPLLVLDDADVTRAAKIAVRACFASAGQLCESIERI
CCCHHHHHHHCCHHCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YVHEAVHDRFVEEFVGHVRSIRLGGALDYSADMGSLTFQRQLDTVRAHVDDAVAKGATVL
HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE
AGGRARPDLGPYFYEPTVLTDVTEEMTVYREETFGPVVSIYRVADEDAAVEAANDTPYGL
ECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEECCCCCCCC
NASVWTRDAERGRRVAARIRAGSVNVNEGFIAAWGSADAPSGGLGISGNGRRHGPEGLLK
CCHHCCCCHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
YVDTQTIAVQRVLPIAPLPGMSEQLWAKTMTLYLGVMKKLRQK
HHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]