| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
Click here to switch to the map view.
The map label for this gene is 53721485
Identifier: 53721485
GI number: 53721485
Start: 613249
End: 613701
Strand: Reverse
Name: 53721485
Synonym: BPSS0448
Alternate gene names: NA
Gene position: 613701-613249 (Counterclockwise)
Preceding gene: 53721486
Following gene: 53721477
Centisome position: 19.34
GC content: 54.53
Gene sequence:
>453_bases TTGCCTCACGCCTCACGCGGCGGCATTCGCGAAACAGCGCATGCGATTCGATCCGAAGAACCCAAGGAATGCACGATGAG CAGCGACATCCTCTATACCGATTCGGAAATTTCGTCATCCCCTTCCGCCTTCAGCACCCGTTTCGCTTATGACTCGGATT GGGTGGCGGCAAACAACTCGATCAATACGAGCCTCATCTTCAAGCACAATTTGAAATGCATCCCGTATCCGCTCTGCCTG TTCTTTTCGCCCGATCAGGAAGCGGTTTACCCGTTGATCTGGAATTACTACGGACCCAACGCGGGAAACCCGGTGTCGAT CAAGCTCGACCAGACGAAGGTCACGCTTTCGATCGGCAGCGGCATTCCGTTGCACGGCTATTTCGATCCTCAGACGGGCG GCTGGACCTATTGGCGATCCGGATTTTTCAGGGTCACCATTCCGAGTCAATGA
Upstream 100 bases:
>100_bases AACTCGTAGTCGACAAGCTGCCCGCCGTGCACAACCATACGCGGGCGGGGCGAATCCGCTCCGCATCCCGCCGCGGCCCT TGTCCGCGCGCCGCCGCCTC
Downstream 100 bases:
>100_bases GCGCGCAAGCGGCCGCTTCGTTGCGGACCGATCGGCGCGGGCCCGCCGCAGCGCGCGACCCGGCGGCGCGGCACGGCGCG CCCCACGATCATGCCCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPHASRGGIRETAHAIRSEEPKECTMSSDILYTDSEISSSPSAFSTRFAYDSDWVAANNSINTSLIFKHNLKCIPYPLCL FFSPDQEAVYPLIWNYYGPNAGNPVSIKLDQTKVTLSIGSGIPLHGYFDPQTGGWTYWRSGFFRVTIPSQ
Sequences:
>Translated_150_residues MPHASRGGIRETAHAIRSEEPKECTMSSDILYTDSEISSSPSAFSTRFAYDSDWVAANNSINTSLIFKHNLKCIPYPLCL FFSPDQEAVYPLIWNYYGPNAGNPVSIKLDQTKVTLSIGSGIPLHGYFDPQTGGWTYWRSGFFRVTIPSQ >Mature_149_residues PHASRGGIRETAHAIRSEEPKECTMSSDILYTDSEISSSPSAFSTRFAYDSDWVAANNSINTSLIFKHNLKCIPYPLCLF FSPDQEAVYPLIWNYYGPNAGNPVSIKLDQTKVTLSIGSGIPLHGYFDPQTGGWTYWRSGFFRVTIPSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16749; Mature: 16618
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHASRGGIRETAHAIRSEEPKECTMSSDILYTDSEISSSPSAFSTRFAYDSDWVAANNS CCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCEEEECCC INTSLIFKHNLKCIPYPLCLFFSPDQEAVYPLIWNYYGPNAGNPVSIKLDQTKVTLSIGS CCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEECCEEEEEEECC GIPLHGYFDPQTGGWTYWRSGFFRVTIPSQ CCCCCEEECCCCCCEEEECCCEEEEEECCC >Mature Secondary Structure PHASRGGIRETAHAIRSEEPKECTMSSDILYTDSEISSSPSAFSTRFAYDSDWVAANNS CCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCEEEECCC INTSLIFKHNLKCIPYPLCLFFSPDQEAVYPLIWNYYGPNAGNPVSIKLDQTKVTLSIGS CCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEECCEEEEEEECC GIPLHGYFDPQTGGWTYWRSGFFRVTIPSQ CCCCCEEECCCCCCEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA