| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is proP [H]
Identifier: 53721362
GI number: 53721362
Start: 456588
End: 457880
Strand: Reverse
Name: proP [H]
Synonym: BPSS0327
Alternate gene names: 53721362
Gene position: 457880-456588 (Counterclockwise)
Preceding gene: 53721363
Following gene: 53721361
Centisome position: 14.43
GC content: 68.29
Gene sequence:
>1293_bases ATGCCCGCTTCCGAACTGAGCGCCGTCTCGAGCGCCCCGCCCCGCGCCCTGACGGGCCGCGACTACAAGACGCTCGGCCT CGCCGCACTGGGCGGCGCGCTGGAGTTCTACGATTTCATCATCTTCGTGTTCTTCGCGCCCGCGATCGGCCAGTTGTTCT TTCCGCACGACATTCCCGACTGGCTGCGCCAACTGCAGACGTTCGGCATCTTCGCGGCCGGCTATCTCGCGCGGCCGCTC GGCGGCATCGTGATGGCGCACTTCGGCGACCTCATCGGCCGCAAGCGGATGTTCACGTTGAGCGTGCTGCTGATGTCGGT GCCGACGCTCCTGATGGGCCTGCTGCCCACCTACGACAGCGTCGGTATCCTCGCGCCCGTCGTGCTGCTGCTGTTGCGCG TGCTGCAAGGCGCGGCGGTGGGCGGCGAAGTGCCGGGCGCGTGGGTGTTCGTCTCCGAGCACGTGCCGCCGCAACGCATC GGCTATGCGTGCGGCACGCTGACGGCGGGCCTGACCATCGGCATCCTGCTCGGCTCGCTCGTCGCGACGGCCGTCAACAG CCGCTTCTCGACGGCCGAGGTTGCCGCGTTCGCGTGGCGCATCCCGTTCCTGCTCGGCGGCGTGTTCGGCCTGTTCTCCG TCTACCTGCGCCGCTGGCTGCACGAGACGCCCGTGTTCGCCGAAATGAAGGCGCGCAAGACGCTCGCGGCCGAAATCCCG CTGAAGGCCGTGATCCGCGACCACGGCCGCGCGGTGATCGTATCGATGCTGATCACGTGGATGCTGTCGGCGGCGATCGT CGTCGTGATCCTGATGACGCCGACGCTGCTGCAAAAGCAGTTCCACATCGCGCCCGCGACCGCGCTGTTCGCGAACAGCA TCGCGACGCTGTGCCTCACGGCCGGCTGCATCACCGCCGGCTCGCTCGCCGACCGCTTCGGCGCGAAGGCGGTGCTGTCG ATCGGCGGCGTCGCGCTCGCCGCGTGCTACTACGCGATGTACACGCAGATCGCCGTCGACGCGGCGCGCCTCGTGCCGCT CTACGGGCTCGCGGGCTTCACCGTCGGCACGATCGGCGCGGTGCCGTTCGTGCTGGTGAAGAGCTTTCCGGCCGTCGTGC GCTTCTCGGGCATCTCGTTCTCGTACAACGTCGCGTACGCGGTGTTCGGCGGGCTCACGCCGGTAATCGTGTCGCTGCTG ATGAAATCGCACTCGCTCGCGCCGGCGCACTATGTCGCGGCGATCTGCGTGCTCGGCGCGGTCGCGATGCTGTTCTCGAA GGACGCCGAATAA
Upstream 100 bases:
>100_bases CCACCCCGCGCGTTGCACCGTCTGTTCGACAACGAGGCCCGCCGCCCGGCCCCGTTTTTTCGCGCGGTACACAACCATTC GAACCAAGATCGCCCTGACC
Downstream 100 bases:
>100_bases CGCCGGTTGCGCGCGCGGCGCGGCACGCGTCGTGCTTGGGTGCTTCGGCGTTCCGGTGCTTTGGGGGCTTTGGGGGCTTT GGGGGCTTTGGGCGCTTCCC
Product: sugar transport-related, membrane protein
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MPASELSAVSSAPPRALTGRDYKTLGLAALGGALEFYDFIIFVFFAPAIGQLFFPHDIPDWLRQLQTFGIFAAGYLARPL GGIVMAHFGDLIGRKRMFTLSVLLMSVPTLLMGLLPTYDSVGILAPVVLLLLRVLQGAAVGGEVPGAWVFVSEHVPPQRI GYACGTLTAGLTIGILLGSLVATAVNSRFSTAEVAAFAWRIPFLLGGVFGLFSVYLRRWLHETPVFAEMKARKTLAAEIP LKAVIRDHGRAVIVSMLITWMLSAAIVVVILMTPTLLQKQFHIAPATALFANSIATLCLTAGCITAGSLADRFGAKAVLS IGGVALAACYYAMYTQIAVDAARLVPLYGLAGFTVGTIGAVPFVLVKSFPAVVRFSGISFSYNVAYAVFGGLTPVIVSLL MKSHSLAPAHYVAAICVLGAVAMLFSKDAE
Sequences:
>Translated_430_residues MPASELSAVSSAPPRALTGRDYKTLGLAALGGALEFYDFIIFVFFAPAIGQLFFPHDIPDWLRQLQTFGIFAAGYLARPL GGIVMAHFGDLIGRKRMFTLSVLLMSVPTLLMGLLPTYDSVGILAPVVLLLLRVLQGAAVGGEVPGAWVFVSEHVPPQRI GYACGTLTAGLTIGILLGSLVATAVNSRFSTAEVAAFAWRIPFLLGGVFGLFSVYLRRWLHETPVFAEMKARKTLAAEIP LKAVIRDHGRAVIVSMLITWMLSAAIVVVILMTPTLLQKQFHIAPATALFANSIATLCLTAGCITAGSLADRFGAKAVLS IGGVALAACYYAMYTQIAVDAARLVPLYGLAGFTVGTIGAVPFVLVKSFPAVVRFSGISFSYNVAYAVFGGLTPVIVSLL MKSHSLAPAHYVAAICVLGAVAMLFSKDAE >Mature_429_residues PASELSAVSSAPPRALTGRDYKTLGLAALGGALEFYDFIIFVFFAPAIGQLFFPHDIPDWLRQLQTFGIFAAGYLARPLG GIVMAHFGDLIGRKRMFTLSVLLMSVPTLLMGLLPTYDSVGILAPVVLLLLRVLQGAAVGGEVPGAWVFVSEHVPPQRIG YACGTLTAGLTIGILLGSLVATAVNSRFSTAEVAAFAWRIPFLLGGVFGLFSVYLRRWLHETPVFAEMKARKTLAAEIPL KAVIRDHGRAVIVSMLITWMLSAAIVVVILMTPTLLQKQFHIAPATALFANSIATLCLTAGCITAGSLADRFGAKAVLSI GGVALAACYYAMYTQIAVDAARLVPLYGLAGFTVGTIGAVPFVLVKSFPAVVRFSGISFSYNVAYAVFGGLTPVIVSLLM KSHSLAPAHYVAAICVLGAVAMLFSKDAE
Specific function: May be a proton symporter invoved in the uptake of osmolytes such as proline and glycine betaine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=423, Percent_Identity=28.1323877068558, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1788292, Length=417, Percent_Identity=29.4964028776978, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1789941, Length=423, Percent_Identity=31.4420803782506, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1788942, Length=427, Percent_Identity=30.4449648711944, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI87082231, Length=461, Percent_Identity=21.9088937093275, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45503; Mature: 45372
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASELSAVSSAPPRALTGRDYKTLGLAALGGALEFYDFIIFVFFAPAIGQLFFPHDIPD CCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH WLRQLQTFGIFAAGYLARPLGGIVMAHFGDLIGRKRMFTLSVLLMSVPTLLMGLLPTYDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VGILAPVVLLLLRVLQGAAVGGEVPGAWVFVSEHVPPQRIGYACGTLTAGLTIGILLGSL HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH VATAVNSRFSTAEVAAFAWRIPFLLGGVFGLFSVYLRRWLHETPVFAEMKARKTLAAEIP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC LKAVIRDHGRAVIVSMLITWMLSAAIVVVILMTPTLLQKQFHIAPATALFANSIATLCLT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGCITAGSLADRFGAKAVLSIGGVALAACYYAMYTQIAVDAARLVPLYGLAGFTVGTIGA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPFVLVKSFPAVVRFSGISFSYNVAYAVFGGLTPVIVSLLMKSHSLAPAHYVAAICVLGA HHHHHHHHCHHHHEECCCCEEHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VAMLFSKDAE HHHHHHCCCC >Mature Secondary Structure PASELSAVSSAPPRALTGRDYKTLGLAALGGALEFYDFIIFVFFAPAIGQLFFPHDIPD CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH WLRQLQTFGIFAAGYLARPLGGIVMAHFGDLIGRKRMFTLSVLLMSVPTLLMGLLPTYDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VGILAPVVLLLLRVLQGAAVGGEVPGAWVFVSEHVPPQRIGYACGTLTAGLTIGILLGSL HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH VATAVNSRFSTAEVAAFAWRIPFLLGGVFGLFSVYLRRWLHETPVFAEMKARKTLAAEIP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC LKAVIRDHGRAVIVSMLITWMLSAAIVVVILMTPTLLQKQFHIAPATALFANSIATLCLT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGCITAGSLADRFGAKAVLSIGGVALAACYYAMYTQIAVDAARLVPLYGLAGFTVGTIGA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPFVLVKSFPAVVRFSGISFSYNVAYAVFGGLTPVIVSLLMKSHSLAPAHYVAAICVLGA HHHHHHHHCHHHHEECCCCEEHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VAMLFSKDAE HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10708580 [H]