| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
Click here to switch to the map view.
The map label for this gene is mmr [H]
Identifier: 53721361
GI number: 53721361
Start: 454731
End: 456302
Strand: Reverse
Name: mmr [H]
Synonym: BPSS0326
Alternate gene names: 53721361
Gene position: 456302-454731 (Counterclockwise)
Preceding gene: 53721362
Following gene: 53721355
Centisome position: 14.38
GC content: 73.03
Gene sequence:
>1572_bases ATGGACACGCATCTTCCCCACCCCGCCCTTTCCCGCGCCGCGCTCGTGCGGATCGTGTCGACCGTCAGCGCGAGCTTCGT GATCACGCAGCTCGACGTGACGATCGTCAACGTCGCGCTCGCGCGCATCGGCATCGATCTGCATACGAGCGTCGCGGGCC TGCAATGGATCGTCGACGCCTACACGCTCGCGCTCGCGGGCCTGATGCTGTCGGCCGGCGCGCTCGGCGACCGGTTCGGC GCGCGCCGGCTGTTCGCCGCCGGGCTCGCGCTCTTCGCCGTCGCATCGTTCGTCTGCGGCATCGCCGCGAACGCGGCGAC GCTCATCGCCGCGCGCGCGCTGCAAGGGCTCGCGGCGGCCGCGATGCTCCCGAACTCGCTCGCGCTGCTCAACCATGCGT GCGCGCACGATCCACGGCTGCGGGCGCGCGCGGTCGGCTGGTGGACCGCGTCGGGCGCGATCTCGATCGCGGCGGGCCCG GTGATCGGCGGCGTGCTGATCGCGCAGTTCGGCTGGCGCAGCATCTTCTTCGTCAATCTGCCGCTGTGCGCGGCGAGCCT CGCCGCGACGCGTCTGTGGATCGACAGCGACGACACGCGCGCGGCAGCCGCTTCGTCGGCCTCGTCCGCTTCATCGGCCT CGTCGGCCTCGTCCGCCTCGTCCGCCTCGTCCGCTTCATCCGCCGCCGACGGCGCGCACCATTCGCACCCGGCGGCGGAC CGGCGCGCATCCGGCCCGAATGCCTGCGCCCCCGCGCCCAAGCGCGCCGCCGGCGCCGGAACACGCGGCCTCGACCTGCC CGGCCAGTGCCTCGCCGTCGTCGCGCTCACGCTCTTCACCGGCGCGGTAATCGACTGGCATCCGGCGCTCGTCGCGATCG CGCTCGCGGCGGGCGCCGCGTTCGTGTTCGTCGAATCGCGCAGCGCGCACCCGATGATGCCGCTCGCGCTGTTCAGGCGG CGCACGTTCAGCGTCGCCGTGCTGTTCGGTGTCTGCATGAATCTGTCGTACTACGGGATCATCTTCGTGCTGAGCCTGTA TTTGCAGCGCGTGCGCCACAACACGCCGCTCGAGGCGGGGCTCGCGTTCCTGCCGCTCACGGGGGGCTTCCTGCTGTCGA ACGTCGCGAGCGGCTGGGCGACCGCGCACTACGGCTCGCGCCGGCCGATGATCGCCGGCGCGCTGATCGGCGCGACCGGT TTCGCGCTGCTGAGCGCGGTGCGTGCCGATACGCCGATCGCGATGCTCGTCGTGCCGTTCCTGCTGATTCCGGGCGGCAT GGGGCTCGCGGTGCCCGCGATGACGACGACGGTGCTCGCCTCGGTCGAACGCGCGCGCGCCGCGACCGCGTCGGCCGTGC TCAATACCGCGCGGCAGGCGGGCGGCGCGATCGGCGTCGCCGCGTTCGGCGCGCTCGCGAGCGGCGCGCGGCCGCCGGAC ATCGTGTCGGGATTGCACGCGTCGGCGTACGTATCGGCCGCGCTCTTCGTGTTCGCCTCGGCGATGGCGGCTTTCGTGCA CGGCGCGCCGCAGCCGGCGGCGGGCAAGCCGGCGAACGCGAACGCACGCTGA
Upstream 100 bases:
>100_bases GCAAGCCGCCGCCGAAAGGGCACGGCCGCCCGTGCGCGCCGCATCGACATTTCAGCAGACCCCGTAACGTCGCCGTCCCG CGCCGCCCTACGATGCGTGC
Downstream 100 bases:
>100_bases CGCGGCGCGAACCCGCCGCGCGCGCGTCATGTCATGAGCGAGGACGCGGGTGCGAAAGCGAAAAAACGCCCGCGGAAAAG GGAACCATCGGGCAACGGGA
Product: transport-related membrane protein
Products: NA
Alternate protein names: MMR peptide [H]
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MDTHLPHPALSRAALVRIVSTVSASFVITQLDVTIVNVALARIGIDLHTSVAGLQWIVDAYTLALAGLMLSAGALGDRFG ARRLFAAGLALFAVASFVCGIAANAATLIAARALQGLAAAAMLPNSLALLNHACAHDPRLRARAVGWWTASGAISIAAGP VIGGVLIAQFGWRSIFFVNLPLCAASLAATRLWIDSDDTRAAAASSASSASSASSASSASSASSASSAADGAHHSHPAAD RRASGPNACAPAPKRAAGAGTRGLDLPGQCLAVVALTLFTGAVIDWHPALVAIALAAGAAFVFVESRSAHPMMPLALFRR RTFSVAVLFGVCMNLSYYGIIFVLSLYLQRVRHNTPLEAGLAFLPLTGGFLLSNVASGWATAHYGSRRPMIAGALIGATG FALLSAVRADTPIAMLVVPFLLIPGGMGLAVPAMTTTVLASVERARAATASAVLNTARQAGGAIGVAAFGALASGARPPD IVSGLHASAYVSAALFVFASAMAAFVHGAPQPAAGKPANANAR
Sequences:
>Translated_523_residues MDTHLPHPALSRAALVRIVSTVSASFVITQLDVTIVNVALARIGIDLHTSVAGLQWIVDAYTLALAGLMLSAGALGDRFG ARRLFAAGLALFAVASFVCGIAANAATLIAARALQGLAAAAMLPNSLALLNHACAHDPRLRARAVGWWTASGAISIAAGP VIGGVLIAQFGWRSIFFVNLPLCAASLAATRLWIDSDDTRAAAASSASSASSASSASSASSASSASSAADGAHHSHPAAD RRASGPNACAPAPKRAAGAGTRGLDLPGQCLAVVALTLFTGAVIDWHPALVAIALAAGAAFVFVESRSAHPMMPLALFRR RTFSVAVLFGVCMNLSYYGIIFVLSLYLQRVRHNTPLEAGLAFLPLTGGFLLSNVASGWATAHYGSRRPMIAGALIGATG FALLSAVRADTPIAMLVVPFLLIPGGMGLAVPAMTTTVLASVERARAATASAVLNTARQAGGAIGVAAFGALASGARPPD IVSGLHASAYVSAALFVFASAMAAFVHGAPQPAAGKPANANAR >Mature_523_residues MDTHLPHPALSRAALVRIVSTVSASFVITQLDVTIVNVALARIGIDLHTSVAGLQWIVDAYTLALAGLMLSAGALGDRFG ARRLFAAGLALFAVASFVCGIAANAATLIAARALQGLAAAAMLPNSLALLNHACAHDPRLRARAVGWWTASGAISIAAGP VIGGVLIAQFGWRSIFFVNLPLCAASLAATRLWIDSDDTRAAAASSASSASSASSASSASSASSASSAADGAHHSHPAAD RRASGPNACAPAPKRAAGAGTRGLDLPGQCLAVVALTLFTGAVIDWHPALVAIALAAGAAFVFVESRSAHPMMPLALFRR RTFSVAVLFGVCMNLSYYGIIFVLSLYLQRVRHNTPLEAGLAFLPLTGGFLLSNVASGWATAHYGSRRPMIAGALIGATG FALLSAVRADTPIAMLVVPFLLIPGGMGLAVPAMTTTVLASVERARAATASAVLNTARQAGGAIGVAAFGALASGARPPD IVSGLHASAYVSAALFVFASAMAAFVHGAPQPAAGKPANANAR
Specific function: Resistance to the epoxide antibiotic methylenomycin A; probably by mediating its efflux [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=449, Percent_Identity=27.3942093541203, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1790195, Length=169, Percent_Identity=35.5029585798817, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1789042, Length=181, Percent_Identity=30.939226519337, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788710, Length=155, Percent_Identity=32.258064516129, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1790146, Length=177, Percent_Identity=31.0734463276836, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1788392, Length=171, Percent_Identity=29.8245614035088, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 52801; Mature: 52801
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTHLPHPALSRAALVRIVSTVSASFVITQLDVTIVNVALARIGIDLHTSVAGLQWIVDA CCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH YTLALAGLMLSAGALGDRFGARRLFAAGLALFAVASFVCGIAANAATLIAARALQGLAAA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLPNSLALLNHACAHDPRLRARAVGWWTASGAISIAAGPVIGGVLIAQFGWRSIFFVNL HHCCCHHHHHHHHHCCCCCHHHEEEEEEECCCCEEEECCHHHHHHHHHHHCCCEEEEEEC PLCAASLAATRLWIDSDDTRAAAASSASSASSASSASSASSASSASSAADGAHHSHPAAD HHHHHHHHHHEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC RRASGPNACAPAPKRAAGAGTRGLDLPGQCLAVVALTLFTGAVIDWHPALVAIALAAGAA CCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCE FVFVESRSAHPMMPLALFRRRTFSVAVLFGVCMNLSYYGIIFVLSLYLQRVRHNTPLEAG EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHC LAFLPLTGGFLLSNVASGWATAHYGSRRPMIAGALIGATGFALLSAVRADTPIAMLVVPF EEEECCCCHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLIPGGMGLAVPAMTTTVLASVERARAATASAVLNTARQAGGAIGVAAFGALASGARPPD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHH IVSGLHASAYVSAALFVFASAMAAFVHGAPQPAAGKPANANAR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDTHLPHPALSRAALVRIVSTVSASFVITQLDVTIVNVALARIGIDLHTSVAGLQWIVDA CCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH YTLALAGLMLSAGALGDRFGARRLFAAGLALFAVASFVCGIAANAATLIAARALQGLAAA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLPNSLALLNHACAHDPRLRARAVGWWTASGAISIAAGPVIGGVLIAQFGWRSIFFVNL HHCCCHHHHHHHHHCCCCCHHHEEEEEEECCCCEEEECCHHHHHHHHHHHCCCEEEEEEC PLCAASLAATRLWIDSDDTRAAAASSASSASSASSASSASSASSASSAADGAHHSHPAAD HHHHHHHHHHEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC RRASGPNACAPAPKRAAGAGTRGLDLPGQCLAVVALTLFTGAVIDWHPALVAIALAAGAA CCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCE FVFVESRSAHPMMPLALFRRRTFSVAVLFGVCMNLSYYGIIFVLSLYLQRVRHNTPLEAG EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHC LAFLPLTGGFLLSNVASGWATAHYGSRRPMIAGALIGATGFALLSAVRADTPIAMLVVPF EEEECCCCHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLIPGGMGLAVPAMTTTVLASVERARAATASAVLNTARQAGGAIGVAAFGALASGARPPD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHH IVSGLHASAYVSAALFVFASAMAAFVHGAPQPAAGKPANANAR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2828187; 12000953 [H]