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The map label for this gene is hifC [H]

Identifier: 53719638

GI number: 53719638

Start: 2421524

End: 2423872

Strand: Reverse

Name: hifC [H]

Synonym: BPSL2027

Alternate gene names: 53719638

Gene position: 2423872-2421524 (Counterclockwise)

Preceding gene: 53719639

Following gene: 53719637

Centisome position: 59.49

GC content: 71.01

Gene sequence:

>2349_bases
GTGGGCATCGCATTCGCGGCGGCGGGGCACGCGCGCGCGGGCGAGACGGCGACGCTCGCGGACAGCTTCGGCCGCGCGCC
GCCGCCCGTGGGGGGCACGGCGGCGCACGGCACGCTGTATCTCGAGCTCGTCGTGAACGCGCTGTCGACGGGGCGCATCG
TGCCGGTTCGCTATCGCGACGGCATCTACTACGCGCGCGCGGGCGATCTCGCGCAGGCGTCGGTGCGCACGGGCGCGCAG
CCCGATGCGCTCGTCGATCTGTCGAGGCTCGACGGCGTGCAGGTCGAATACGAGAGCGCCGAGCAGCGCCTGAAGCTCAC
CGTGCCGCCCGACTGGCTGCCGCGCCAGACGCTCGGTTCGCCGCGGCTGTACGACCGCACGCCCGCGGCCGTCAGCTTCG
GGCTCCTGTTCAATTACGACGTGTATGCGAATTCGCCGACGCTCGGCACGAGCTACACGTCCGCATGGACCGAGCAGCGG
CTGTTCGACCGATGGGGCACCGTGACGAACACGGGCGTCTACCGGCGCGATTACGGTGGCGGCGCCGGCGGCGTCGGGAG
CAACCGCTATCTGCGCTACGACACGTTCTGGCGCTATTCGGACCAGGACCGGCTGCGCACGTACACCGCGGGCGACGTGA
TCACGGGCGCGCTGTCGTGGTCGAGCGCCGTGCGCTTGGGGGGCGTGTCCGTCGAGCGCGATTTCAAGGTGCGGCCCGAC
ATCGTCACCTATCCGCTGCCGCAGTTCTCGGGCCAGGCCGCGGTGCCCACCGCGGTCGATCTGTTCATCAACGGCAGCAA
GACGACGACGGGGCAGGTGAATCCCGGCCCGTTCACGATGAACAACGTGCCGTTCATCAACGGCGCCGGCGAGGCGACCG
TCGTCACGACCGACGCGCTCGGCCGTCAGGTGGCGACGACGATTCCGTTCTACGTCGCGAACACGCTGCTGCAAAAAGGG
CTCTCCGATTATTCGCTGTCGGCGGGCGCGATGCGGCGCGACTACGGGATCCGCTCGTTCTCGTACGGCAAGTTCGCGGC
GTCGGGCACCGCGCGTCACGGCCTGACCGATTACCTGACGCTCGAGGGCCACGTGGAGGGCGGCGAGCGCTTCGCGCTCG
GCGGGCTCGGGTTCGACCTCGGCATCGGCATGTTCGGCGTGCTCGGCGTCGCGGCGACGCAGAGCCGCCTCGCCGGTGCG
TCGGGCCGGCAATACGCGTTCGGCTACAGCTACGCGTCGCAGCGGTTCAGCGTGTCGCTGCAGCGCATCCAGCGCACGAA
CGGGTTTCGCGACCTGTCGGTGTACGACCTGCCGGCGAACGTCGCGTACCGGCTCGTGCGCAGCAGCACGCAGGCGACGG
GCGCGCTCAATCTCGGCGCGCTCGGCGGCACGCTCGGCGCTGGCTACTTCGATGTGCGCGGCGCGGACGGCACGCGCACG
CGGATCGCGAACCTGTCGTATACGCGGCCGCTATGGCGGCGCGCGACGCTCTACGCATCGGTCAACAAGACGGTCGGCGA
GCACGGCGTGGCCGCGCAACTTCAACTGATCGTGCCGCTCGGCGAGCCGGGCGTCGTGACGGGCGCGCTCGCGCGCGACG
CGAACAACAGTTTCAGCGAGCGCGTGCAGTACAGCCGCAGCGTGCCGAGCGACGGCGGCCTCGGCTGGAATCTCGCGTAC
GCGGGCGGCGGCTCGCATTATCAGCAGGCGGATGCGACGTGGCGCAACCGCTACTTCCAGGCGCAGGGCGGCGTGTACGG
CTACGGCGCGGGGCGCGGCTACGCGCGCTGGGGCGAGGTGCAGGGCTCGGTCGTCGTGATGGACGGCGCGGTGCTGCCCG
CGAACCGTGTCGACGATGCGTTCGTGCTGATCGATACGCAGGGCCGCGGGGGCGTGCCGGTGCGCTACGAGAATCAGCTC
GTCGGCAAGACCGACGGCGGCGGCCACCTGCTCGTGCCGTGGGCGCCGTCGTATTACGCGGGCAAGTACGAGATCGATCC
GCTCGACCTGCCGAGCAACGTGCGCGTGCCGATCGTCGAGCGCCGCGTCGCAGTGCGCGACCACGGCGGTGCGCTCGTCA
CGTTCCCGATCCGCAGGATCGTCTGCGCGCAGATCGCGCTCGTCGACGCGGCGGGCCGGCCGGTCGCCATCGGCTCGCGC
GTGCTGCACGAGGAGAGCGGCGAGACCGCGCTCGTCGGCTGGCAGGGCGAGACCTATCTCGAAGGCTTGTCCGCGCTCAA
CCACCTGCGCGTGCGGACGCCCGACGGCCGCACCTGCCGCGCGACGTTCGCAGCCGACATCGACGCGGCGCAGATGAGCC
GCGTCGGCCCGCTCGCGTGCGGCGAATAA

Upstream 100 bases:

>100_bases
CACGACACAAGCGACAATGTCGCGACGGGGAAATGCCTTGAAGCGGTACAACGATGACAGAACGAGCGGACTGCCGCGGC
GGCGCGCGGCGGCGTGGGCG

Downstream 100 bases:

>100_bases
CGACAGGATTCCTCGATGACGCCATTCCGACTATTCTTCGTGCGCATCGCGGCGACGCTCGCGCTCGGTCTCTTTTCGGC
GCTGCATGCGCACGCGACGT

Product: putative fimbriae-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 782; Mature: 781

Protein sequence:

>782_residues
MGIAFAAAGHARAGETATLADSFGRAPPPVGGTAAHGTLYLELVVNALSTGRIVPVRYRDGIYYARAGDLAQASVRTGAQ
PDALVDLSRLDGVQVEYESAEQRLKLTVPPDWLPRQTLGSPRLYDRTPAAVSFGLLFNYDVYANSPTLGTSYTSAWTEQR
LFDRWGTVTNTGVYRRDYGGGAGGVGSNRYLRYDTFWRYSDQDRLRTYTAGDVITGALSWSSAVRLGGVSVERDFKVRPD
IVTYPLPQFSGQAAVPTAVDLFINGSKTTTGQVNPGPFTMNNVPFINGAGEATVVTTDALGRQVATTIPFYVANTLLQKG
LSDYSLSAGAMRRDYGIRSFSYGKFAASGTARHGLTDYLTLEGHVEGGERFALGGLGFDLGIGMFGVLGVAATQSRLAGA
SGRQYAFGYSYASQRFSVSLQRIQRTNGFRDLSVYDLPANVAYRLVRSSTQATGALNLGALGGTLGAGYFDVRGADGTRT
RIANLSYTRPLWRRATLYASVNKTVGEHGVAAQLQLIVPLGEPGVVTGALARDANNSFSERVQYSRSVPSDGGLGWNLAY
AGGGSHYQQADATWRNRYFQAQGGVYGYGAGRGYARWGEVQGSVVVMDGAVLPANRVDDAFVLIDTQGRGGVPVRYENQL
VGKTDGGGHLLVPWAPSYYAGKYEIDPLDLPSNVRVPIVERRVAVRDHGGALVTFPIRRIVCAQIALVDAAGRPVAIGSR
VLHEESGETALVGWQGETYLEGLSALNHLRVRTPDGRTCRATFAADIDAAQMSRVGPLACGE

Sequences:

>Translated_782_residues
MGIAFAAAGHARAGETATLADSFGRAPPPVGGTAAHGTLYLELVVNALSTGRIVPVRYRDGIYYARAGDLAQASVRTGAQ
PDALVDLSRLDGVQVEYESAEQRLKLTVPPDWLPRQTLGSPRLYDRTPAAVSFGLLFNYDVYANSPTLGTSYTSAWTEQR
LFDRWGTVTNTGVYRRDYGGGAGGVGSNRYLRYDTFWRYSDQDRLRTYTAGDVITGALSWSSAVRLGGVSVERDFKVRPD
IVTYPLPQFSGQAAVPTAVDLFINGSKTTTGQVNPGPFTMNNVPFINGAGEATVVTTDALGRQVATTIPFYVANTLLQKG
LSDYSLSAGAMRRDYGIRSFSYGKFAASGTARHGLTDYLTLEGHVEGGERFALGGLGFDLGIGMFGVLGVAATQSRLAGA
SGRQYAFGYSYASQRFSVSLQRIQRTNGFRDLSVYDLPANVAYRLVRSSTQATGALNLGALGGTLGAGYFDVRGADGTRT
RIANLSYTRPLWRRATLYASVNKTVGEHGVAAQLQLIVPLGEPGVVTGALARDANNSFSERVQYSRSVPSDGGLGWNLAY
AGGGSHYQQADATWRNRYFQAQGGVYGYGAGRGYARWGEVQGSVVVMDGAVLPANRVDDAFVLIDTQGRGGVPVRYENQL
VGKTDGGGHLLVPWAPSYYAGKYEIDPLDLPSNVRVPIVERRVAVRDHGGALVTFPIRRIVCAQIALVDAAGRPVAIGSR
VLHEESGETALVGWQGETYLEGLSALNHLRVRTPDGRTCRATFAADIDAAQMSRVGPLACGE
>Mature_781_residues
GIAFAAAGHARAGETATLADSFGRAPPPVGGTAAHGTLYLELVVNALSTGRIVPVRYRDGIYYARAGDLAQASVRTGAQP
DALVDLSRLDGVQVEYESAEQRLKLTVPPDWLPRQTLGSPRLYDRTPAAVSFGLLFNYDVYANSPTLGTSYTSAWTEQRL
FDRWGTVTNTGVYRRDYGGGAGGVGSNRYLRYDTFWRYSDQDRLRTYTAGDVITGALSWSSAVRLGGVSVERDFKVRPDI
VTYPLPQFSGQAAVPTAVDLFINGSKTTTGQVNPGPFTMNNVPFINGAGEATVVTTDALGRQVATTIPFYVANTLLQKGL
SDYSLSAGAMRRDYGIRSFSYGKFAASGTARHGLTDYLTLEGHVEGGERFALGGLGFDLGIGMFGVLGVAATQSRLAGAS
GRQYAFGYSYASQRFSVSLQRIQRTNGFRDLSVYDLPANVAYRLVRSSTQATGALNLGALGGTLGAGYFDVRGADGTRTR
IANLSYTRPLWRRATLYASVNKTVGEHGVAAQLQLIVPLGEPGVVTGALARDANNSFSERVQYSRSVPSDGGLGWNLAYA
GGGSHYQQADATWRNRYFQAQGGVYGYGAGRGYARWGEVQGSVVVMDGAVLPANRVDDAFVLIDTQGRGGVPVRYENQLV
GKTDGGGHLLVPWAPSYYAGKYEIDPLDLPSNVRVPIVERRVAVRDHGGALVTFPIRRIVCAQIALVDAAGRPVAIGSRV
LHEESGETALVGWQGETYLEGLSALNHLRVRTPDGRTCRATFAADIDAAQMSRVGPLACGE

Specific function: Essential for piliation [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1790772, Length=764, Percent_Identity=23.0366492146597, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1786744, Length=593, Percent_Identity=25.4637436762226, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1789533, Length=698, Percent_Identity=22.7793696275072, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 83650; Mature: 83518

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIAFAAAGHARAGETATLADSFGRAPPPVGGTAAHGTLYLELVVNALSTGRIVPVRYRD
CCEEEEECCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCEEEEEEEC
GIYYARAGDLAQASVRTGAQPDALVDLSRLDGVQVEYESAEQRLKLTVPPDWLPRQTLGS
CEEEEECCCCHHHHHHCCCCCHHEEEHHHCCCEEEEECCCCCEEEEECCCCCCCHHHCCC
PRLYDRTPAAVSFGLLFNYDVYANSPTLGTSYTSAWTEQRLFDRWGTVTNTGVYRRDYGG
CCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCC
GAGGVGSNRYLRYDTFWRYSDQDRLRTYTAGDVITGALSWSSAVRLGGVSVERDFKVRPD
CCCCCCCCCEEEEEEEEEECCCCHHEEEECCCCEEEECCCCCCEEECCEEEECCCCCCCC
IVTYPLPQFSGQAAVPTAVDLFINGSKTTTGQVNPGPFTMNNVPFINGAGEATVVTTDAL
EEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCEECCCCCEEEEEHHHH
GRQVATTIPFYVANTLLQKGLSDYSLSAGAMRRDYGIRSFSYGKFAASGTARHGLTDYLT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCEEEE
LEGHVEGGERFALGGLGFDLGIGMFGVLGVAATQSRLAGASGRQYAFGYSYASQRFSVSL
EEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH
QRIQRTNGFRDLSVYDLPANVAYRLVRSSTQATGALNLGALGGTLGAGYFDVRGADGTRT
HHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCE
RIANLSYTRPLWRRATLYASVNKTVGEHGVAAQLQLIVPLGEPGVVTGALARDANNSFSE
EEECCCCCCCHHHHEEEEEEHHHHHCCCCCEEEEEEEEECCCCCEEEEHHHHCCCCCHHH
RVQYSRSVPSDGGLGWNLAYAGGGSHYQQADATWRNRYFQAQGGVYGYGAGRGYARWGEV
HHHHHCCCCCCCCCCEEEEEECCCCCCHHCCCHHHHCEEEECCCEEEECCCCCCCCCCCC
QGSVVVMDGAVLPANRVDDAFVLIDTQGRGGVPVRYENQLVGKTDGGGHLLVPWAPSYYA
CCCEEEEECEECCCCCCCCEEEEEECCCCCCCCEEECCEEEECCCCCCEEEEECCCCCCC
GKYEIDPLDLPSNVRVPIVERRVAVRDHGGALVTFPIRRIVCAQIALVDAAGRPVAIGSR
CEEECCCCCCCCCCCCEEECCEEEEECCCCEEEEHHHHHHHHHHHEEEECCCCCEEECHH
VLHEESGETALVGWQGETYLEGLSALNHLRVRTPDGRTCRATFAADIDAAQMSRVGPLAC
HHHCCCCCEEEEECCCCHHHHHHHHHHEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCC
GE
CC
>Mature Secondary Structure 
GIAFAAAGHARAGETATLADSFGRAPPPVGGTAAHGTLYLELVVNALSTGRIVPVRYRD
CEEEEECCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCEEEEEEEC
GIYYARAGDLAQASVRTGAQPDALVDLSRLDGVQVEYESAEQRLKLTVPPDWLPRQTLGS
CEEEEECCCCHHHHHHCCCCCHHEEEHHHCCCEEEEECCCCCEEEEECCCCCCCHHHCCC
PRLYDRTPAAVSFGLLFNYDVYANSPTLGTSYTSAWTEQRLFDRWGTVTNTGVYRRDYGG
CCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCC
GAGGVGSNRYLRYDTFWRYSDQDRLRTYTAGDVITGALSWSSAVRLGGVSVERDFKVRPD
CCCCCCCCCEEEEEEEEEECCCCHHEEEECCCCEEEECCCCCCEEECCEEEECCCCCCCC
IVTYPLPQFSGQAAVPTAVDLFINGSKTTTGQVNPGPFTMNNVPFINGAGEATVVTTDAL
EEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCEECCCCCEEEEEHHHH
GRQVATTIPFYVANTLLQKGLSDYSLSAGAMRRDYGIRSFSYGKFAASGTARHGLTDYLT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCEEEE
LEGHVEGGERFALGGLGFDLGIGMFGVLGVAATQSRLAGASGRQYAFGYSYASQRFSVSL
EEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH
QRIQRTNGFRDLSVYDLPANVAYRLVRSSTQATGALNLGALGGTLGAGYFDVRGADGTRT
HHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCE
RIANLSYTRPLWRRATLYASVNKTVGEHGVAAQLQLIVPLGEPGVVTGALARDANNSFSE
EEECCCCCCCHHHHEEEEEEHHHHHCCCCCEEEEEEEEECCCCCEEEEHHHHCCCCCHHH
RVQYSRSVPSDGGLGWNLAYAGGGSHYQQADATWRNRYFQAQGGVYGYGAGRGYARWGEV
HHHHHCCCCCCCCCCEEEEEECCCCCCHHCCCHHHHCEEEECCCEEEECCCCCCCCCCCC
QGSVVVMDGAVLPANRVDDAFVLIDTQGRGGVPVRYENQLVGKTDGGGHLLVPWAPSYYA
CCCEEEEECEECCCCCCCCEEEEEECCCCCCCCEEECCEEEECCCCCCEEEEECCCCCCC
GKYEIDPLDLPSNVRVPIVERRVAVRDHGGALVTFPIRRIVCAQIALVDAAGRPVAIGSR
CEEECCCCCCCCCCCCEEECCEEEEECCCCEEEEHHHHHHHHHHHEEEECCCCCEEECHH
VLHEESGETALVGWQGETYLEGLSALNHLRVRTPDGRTCRATFAADIDAAQMSRVGPLAC
HHHCCCCCEEEEECCCCHHHHHHHHHHEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCC
GE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7905461 [H]