| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719637
Identifier: 53719637
GI number: 53719637
Start: 2420543
End: 2421508
Strand: Reverse
Name: 53719637
Synonym: BPSL2026
Alternate gene names: NA
Gene position: 2421508-2420543 (Counterclockwise)
Preceding gene: 53719638
Following gene: 53719636
Centisome position: 59.43
GC content: 68.74
Gene sequence:
>966_bases ATGACGCCATTCCGACTATTCTTCGTGCGCATCGCGGCGACGCTCGCGCTCGGTCTCTTTTCGGCGCTGCATGCGCACGC GACGTGCTCGGTCGTGAGCGCGGCCGCCGCGTCGTTCGGCACGGTCACGTCGTTCGCCGTCGCGCGTCAGCCGCAATCGA CTTCGACGACGAGCAGCGGGCTGTCGTGTTCGGGCGCGCTGCTCGGCCTCTTCGTGATCGGTGACCAGATCAACGCGTCG ATCACGTCGGCCAACGGCGGCAAGCTCGTCGGCCCGACGGGCGACGCGGTGCCGTACACGGTGTTCGCCGACCAGAACTA TTCGATCAAGCTCGATCTCGGCGTGACCTACAACTGGGCGAGCGGGCAGTTGCTGAACCTGCTCGGGATTTTCGGCGGCC CCGCGCAGACGCTGCCGATGTATTTCAGAACGGTCCAGGGCAGCAACGTCGCGGCGGGCACCTACACGGACACGCTGACG ATCGCATGGAACTGGGATTACTGCAGCGGCATCGGCGTGCTCGGCATCTGCCTCGGCCGCGACCGGGGCTCGGGCACCGC GGTCGTGCCGGTGACGATCACCGTGACGAACGACTGCATGATCGCCGCGCCCGACGTGAACTTCGGCGCGGCGCCGACGG TCGCGAGCTTCGCGCCGGTGACGGGCAGCGTGTCGCTCACGTGCACGAAGGGGATGGTCTACACGGTGGGCCTGTCGAGC GGCGCGAATCCGCACGCGAGCGGGCGCCGGCAGATGGCCAATGGCGCGAACCGGCTGCAGTACGACATCTTCGGCCCGGG CGCCGCCGCGGTGTGGGGGCAGTCGGCGAACCGCGCGGGCAGCGGCGCGGCGGCCGACGGCCGTTCGGCGCAGCAGTTTC CGTACACCGCGCGCCTCTATCCGGATCAGCCGACGCCCGCGGTTGGAACGTACACGGACAGCGTGGTCGTGGATGTGCGC TATTAG
Upstream 100 bases:
>100_bases CGGCCGCACCTGCCGCGCGACGTTCGCAGCCGACATCGACGCGGCGCAGATGAGCCGCGTCGGCCCGCTCGCGTGCGGCG AATAACGACAGGATTCCTCG
Downstream 100 bases:
>100_bases CCGAAAATCGGCGCGATTCTGCAATCGTTTCGGGCATGCGAGCCGAATCGGACGGCAGAGACGGAGGTGAACGGAAAAGC CGAATCAGTTTTTTCATTTT
Product: putative lipoprotein
Products: NA
Alternate protein names: Spore Coat U Domain Protein; Type I Pili Chaperone-Usher Pili Assembly System); Spore Coat Protein U Domain-Contain Protein; Type 1 Pili Protein CsuE; Type I Pilus Protein CsuE; Spore Coat U; CsuE Protein; Sigma-Fimbriae Tip Adhesin; Fimbrial Adhesin; Fimbrial Protein; Lipoprotein
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTPFRLFFVRIAATLALGLFSALHAHATCSVVSAAAASFGTVTSFAVARQPQSTSTTSSGLSCSGALLGLFVIGDQINAS ITSANGGKLVGPTGDAVPYTVFADQNYSIKLDLGVTYNWASGQLLNLLGIFGGPAQTLPMYFRTVQGSNVAAGTYTDTLT IAWNWDYCSGIGVLGICLGRDRGSGTAVVPVTITVTNDCMIAAPDVNFGAAPTVASFAPVTGSVSLTCTKGMVYTVGLSS GANPHASGRRQMANGANRLQYDIFGPGAAAVWGQSANRAGSGAAADGRSAQQFPYTARLYPDQPTPAVGTYTDSVVVDVR Y
Sequences:
>Translated_321_residues MTPFRLFFVRIAATLALGLFSALHAHATCSVVSAAAASFGTVTSFAVARQPQSTSTTSSGLSCSGALLGLFVIGDQINAS ITSANGGKLVGPTGDAVPYTVFADQNYSIKLDLGVTYNWASGQLLNLLGIFGGPAQTLPMYFRTVQGSNVAAGTYTDTLT IAWNWDYCSGIGVLGICLGRDRGSGTAVVPVTITVTNDCMIAAPDVNFGAAPTVASFAPVTGSVSLTCTKGMVYTVGLSS GANPHASGRRQMANGANRLQYDIFGPGAAAVWGQSANRAGSGAAADGRSAQQFPYTARLYPDQPTPAVGTYTDSVVVDVR Y >Mature_320_residues TPFRLFFVRIAATLALGLFSALHAHATCSVVSAAAASFGTVTSFAVARQPQSTSTTSSGLSCSGALLGLFVIGDQINASI TSANGGKLVGPTGDAVPYTVFADQNYSIKLDLGVTYNWASGQLLNLLGIFGGPAQTLPMYFRTVQGSNVAAGTYTDTLTI AWNWDYCSGIGVLGICLGRDRGSGTAVVPVTITVTNDCMIAAPDVNFGAAPTVASFAPVTGSVSLTCTKGMVYTVGLSSG ANPHASGRRQMANGANRLQYDIFGPGAAAVWGQSANRAGSGAAADGRSAQQFPYTARLYPDQPTPAVGTYTDSVVVDVRY
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32956; Mature: 32825
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFRLFFVRIAATLALGLFSALHAHATCSVVSAAAASFGTVTSFAVARQPQSTSTTSSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC LSCSGALLGLFVIGDQINASITSANGGKLVGPTGDAVPYTVFADQNYSIKLDLGVTYNWA CCCCHHEEEEEEECCCCCEEEEECCCCEEECCCCCCCEEEEEECCCEEEEEEEEEEEECC SGQLLNLLGIFGGPAQTLPMYFRTVQGSNVAAGTYTDTLTIAWNWDYCSGIGVLGICLGR CCHHHHHHHHCCCCHHHCEEEEEEECCCCEEECEEEEEEEEEECCCHHCCCCEEEEEEEC DRGSGTAVVPVTITVTNDCMIAAPDVNFGAAPTVASFAPVTGSVSLTCTKGMVYTVGLSS CCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCHHHCCCCCCCEEEEEECCEEEEEEECC GANPHASGRRQMANGANRLQYDIFGPGAAAVWGQSANRAGSGAAADGRSAQQFPYTARLY CCCCCCCCHHHHHCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC PDQPTPAVGTYTDSVVVDVRY CCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure TPFRLFFVRIAATLALGLFSALHAHATCSVVSAAAASFGTVTSFAVARQPQSTSTTSSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC LSCSGALLGLFVIGDQINASITSANGGKLVGPTGDAVPYTVFADQNYSIKLDLGVTYNWA CCCCHHEEEEEEECCCCCEEEEECCCCEEECCCCCCCEEEEEECCCEEEEEEEEEEEECC SGQLLNLLGIFGGPAQTLPMYFRTVQGSNVAAGTYTDTLTIAWNWDYCSGIGVLGICLGR CCHHHHHHHHCCCCHHHCEEEEEEECCCCEEECEEEEEEEEEECCCHHCCCCEEEEEEEC DRGSGTAVVPVTITVTNDCMIAAPDVNFGAAPTVASFAPVTGSVSLTCTKGMVYTVGLSS CCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCHHHCCCCCCCEEEEEECCEEEEEEECC GANPHASGRRQMANGANRLQYDIFGPGAAAVWGQSANRAGSGAAADGRSAQQFPYTARLY CCCCCCCCHHHHHCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC PDQPTPAVGTYTDSVVVDVRY CCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA