Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719637

Identifier: 53719637

GI number: 53719637

Start: 2420543

End: 2421508

Strand: Reverse

Name: 53719637

Synonym: BPSL2026

Alternate gene names: NA

Gene position: 2421508-2420543 (Counterclockwise)

Preceding gene: 53719638

Following gene: 53719636

Centisome position: 59.43

GC content: 68.74

Gene sequence:

>966_bases
ATGACGCCATTCCGACTATTCTTCGTGCGCATCGCGGCGACGCTCGCGCTCGGTCTCTTTTCGGCGCTGCATGCGCACGC
GACGTGCTCGGTCGTGAGCGCGGCCGCCGCGTCGTTCGGCACGGTCACGTCGTTCGCCGTCGCGCGTCAGCCGCAATCGA
CTTCGACGACGAGCAGCGGGCTGTCGTGTTCGGGCGCGCTGCTCGGCCTCTTCGTGATCGGTGACCAGATCAACGCGTCG
ATCACGTCGGCCAACGGCGGCAAGCTCGTCGGCCCGACGGGCGACGCGGTGCCGTACACGGTGTTCGCCGACCAGAACTA
TTCGATCAAGCTCGATCTCGGCGTGACCTACAACTGGGCGAGCGGGCAGTTGCTGAACCTGCTCGGGATTTTCGGCGGCC
CCGCGCAGACGCTGCCGATGTATTTCAGAACGGTCCAGGGCAGCAACGTCGCGGCGGGCACCTACACGGACACGCTGACG
ATCGCATGGAACTGGGATTACTGCAGCGGCATCGGCGTGCTCGGCATCTGCCTCGGCCGCGACCGGGGCTCGGGCACCGC
GGTCGTGCCGGTGACGATCACCGTGACGAACGACTGCATGATCGCCGCGCCCGACGTGAACTTCGGCGCGGCGCCGACGG
TCGCGAGCTTCGCGCCGGTGACGGGCAGCGTGTCGCTCACGTGCACGAAGGGGATGGTCTACACGGTGGGCCTGTCGAGC
GGCGCGAATCCGCACGCGAGCGGGCGCCGGCAGATGGCCAATGGCGCGAACCGGCTGCAGTACGACATCTTCGGCCCGGG
CGCCGCCGCGGTGTGGGGGCAGTCGGCGAACCGCGCGGGCAGCGGCGCGGCGGCCGACGGCCGTTCGGCGCAGCAGTTTC
CGTACACCGCGCGCCTCTATCCGGATCAGCCGACGCCCGCGGTTGGAACGTACACGGACAGCGTGGTCGTGGATGTGCGC
TATTAG

Upstream 100 bases:

>100_bases
CGGCCGCACCTGCCGCGCGACGTTCGCAGCCGACATCGACGCGGCGCAGATGAGCCGCGTCGGCCCGCTCGCGTGCGGCG
AATAACGACAGGATTCCTCG

Downstream 100 bases:

>100_bases
CCGAAAATCGGCGCGATTCTGCAATCGTTTCGGGCATGCGAGCCGAATCGGACGGCAGAGACGGAGGTGAACGGAAAAGC
CGAATCAGTTTTTTCATTTT

Product: putative lipoprotein

Products: NA

Alternate protein names: Spore Coat U Domain Protein; Type I Pili Chaperone-Usher Pili Assembly System); Spore Coat Protein U Domain-Contain Protein; Type 1 Pili Protein CsuE; Type I Pilus Protein CsuE; Spore Coat U; CsuE Protein; Sigma-Fimbriae Tip Adhesin; Fimbrial Adhesin; Fimbrial Protein; Lipoprotein

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTPFRLFFVRIAATLALGLFSALHAHATCSVVSAAAASFGTVTSFAVARQPQSTSTTSSGLSCSGALLGLFVIGDQINAS
ITSANGGKLVGPTGDAVPYTVFADQNYSIKLDLGVTYNWASGQLLNLLGIFGGPAQTLPMYFRTVQGSNVAAGTYTDTLT
IAWNWDYCSGIGVLGICLGRDRGSGTAVVPVTITVTNDCMIAAPDVNFGAAPTVASFAPVTGSVSLTCTKGMVYTVGLSS
GANPHASGRRQMANGANRLQYDIFGPGAAAVWGQSANRAGSGAAADGRSAQQFPYTARLYPDQPTPAVGTYTDSVVVDVR
Y

Sequences:

>Translated_321_residues
MTPFRLFFVRIAATLALGLFSALHAHATCSVVSAAAASFGTVTSFAVARQPQSTSTTSSGLSCSGALLGLFVIGDQINAS
ITSANGGKLVGPTGDAVPYTVFADQNYSIKLDLGVTYNWASGQLLNLLGIFGGPAQTLPMYFRTVQGSNVAAGTYTDTLT
IAWNWDYCSGIGVLGICLGRDRGSGTAVVPVTITVTNDCMIAAPDVNFGAAPTVASFAPVTGSVSLTCTKGMVYTVGLSS
GANPHASGRRQMANGANRLQYDIFGPGAAAVWGQSANRAGSGAAADGRSAQQFPYTARLYPDQPTPAVGTYTDSVVVDVR
Y
>Mature_320_residues
TPFRLFFVRIAATLALGLFSALHAHATCSVVSAAAASFGTVTSFAVARQPQSTSTTSSGLSCSGALLGLFVIGDQINASI
TSANGGKLVGPTGDAVPYTVFADQNYSIKLDLGVTYNWASGQLLNLLGIFGGPAQTLPMYFRTVQGSNVAAGTYTDTLTI
AWNWDYCSGIGVLGICLGRDRGSGTAVVPVTITVTNDCMIAAPDVNFGAAPTVASFAPVTGSVSLTCTKGMVYTVGLSSG
ANPHASGRRQMANGANRLQYDIFGPGAAAVWGQSANRAGSGAAADGRSAQQFPYTARLYPDQPTPAVGTYTDSVVVDVRY

Specific function: Unknown

COG id: COG5430

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32956; Mature: 32825

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFRLFFVRIAATLALGLFSALHAHATCSVVSAAAASFGTVTSFAVARQPQSTSTTSSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
LSCSGALLGLFVIGDQINASITSANGGKLVGPTGDAVPYTVFADQNYSIKLDLGVTYNWA
CCCCHHEEEEEEECCCCCEEEEECCCCEEECCCCCCCEEEEEECCCEEEEEEEEEEEECC
SGQLLNLLGIFGGPAQTLPMYFRTVQGSNVAAGTYTDTLTIAWNWDYCSGIGVLGICLGR
CCHHHHHHHHCCCCHHHCEEEEEEECCCCEEECEEEEEEEEEECCCHHCCCCEEEEEEEC
DRGSGTAVVPVTITVTNDCMIAAPDVNFGAAPTVASFAPVTGSVSLTCTKGMVYTVGLSS
CCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCHHHCCCCCCCEEEEEECCEEEEEEECC
GANPHASGRRQMANGANRLQYDIFGPGAAAVWGQSANRAGSGAAADGRSAQQFPYTARLY
CCCCCCCCHHHHHCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDQPTPAVGTYTDSVVVDVRY
CCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TPFRLFFVRIAATLALGLFSALHAHATCSVVSAAAASFGTVTSFAVARQPQSTSTTSSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
LSCSGALLGLFVIGDQINASITSANGGKLVGPTGDAVPYTVFADQNYSIKLDLGVTYNWA
CCCCHHEEEEEEECCCCCEEEEECCCCEEECCCCCCCEEEEEECCCEEEEEEEEEEEECC
SGQLLNLLGIFGGPAQTLPMYFRTVQGSNVAAGTYTDTLTIAWNWDYCSGIGVLGICLGR
CCHHHHHHHHCCCCHHHCEEEEEEECCCCEEECEEEEEEEEEECCCHHCCCCEEEEEEEC
DRGSGTAVVPVTITVTNDCMIAAPDVNFGAAPTVASFAPVTGSVSLTCTKGMVYTVGLSS
CCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCHHHCCCCCCCEEEEEECCEEEEEEECC
GANPHASGRRQMANGANRLQYDIFGPGAAAVWGQSANRAGSGAAADGRSAQQFPYTARLY
CCCCCCCCHHHHHCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDQPTPAVGTYTDSVVVDVRY
CCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA