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The map label for this gene is ecpD [C]

Identifier: 53719639

GI number: 53719639

Start: 2423980

End: 2424819

Strand: Reverse

Name: ecpD [C]

Synonym: BPSL2028

Alternate gene names: 53719639

Gene position: 2424819-2423980 (Counterclockwise)

Preceding gene: 53719640

Following gene: 53719638

Centisome position: 59.51

GC content: 72.14

Gene sequence:

>840_bases
ATGAAAGTTTCGAGATCGCCCGGCGCGCCGGCGCGCGCGGCAAGGGCGCTGCGCTGCGCGCTGCTCGGCGCGGCCGCCGC
CGCGCCGTTCGTCGCGCAGCACGCGCACGCGGCGGCGTCCGTGATGATCTGGCCGATCGATCCCGTGATCGAAAGCGGCG
ACCGGGCGGCGGCGCTCTGGCTCGAGAACCGCGATCGCCGGCCGGTGACGCTGCAGGTGCGCGTGCTCGGCTGGCGCGAG
GCGAACGGCGAGGATGTCTACGACGAGGATCAGCCGCGCGTGGCCGGCAGCCCGCCGATGGCGACGGTCGAGCCCGGCAA
GCGCCAGTTGATTCGCCTCACGCGGCTCGCGGATACGGCGCCCGGCACCGAGCAGGCGTATCGCGTGCTGATCGACGAGA
TCCCGCAGCCGGACGACGACGCGCAACCCGCCGCGAGCGGGACGTCGCTCGGCGTGAAGTTCCAGATGCACTACTCGGTG
CCGCTCTTCGTCTACGGCGACGGCCTGTGGACGAAAGAGCACCCGGACAGGCGCCGCGATCCGGCGACGGCGGGGCGGCC
CGCGCTGCGCTGGCGCGTCGAGCACGACGGCGGCAAGCGTTGGCTCGTCGTGTCGAATCGCGGCCCCGTGCATGCGCGCA
TCACGCACGCGGCGTTCGAAGCGAGCGGCGCGCGCGCCGATTTCGCGCGCGGCCTGCTCGGCTACGTGCTGCCCGGCGCG
CGGATGCGCTGGGCGCTGCCCGAGACTCTCAAGCTCCATTCCAATTCCAAGCTGATCGCCACGGTCAACGGTGTGGCCGA
TCTCGCAATCGACGTGGACGGCGCCGCTTCGAATCGGTAA

Upstream 100 bases:

>100_bases
TCTACGGCGCGCTCACGCTGCCGGGCGGCGGCGCGCCCGCCGGCACGTATACCGATACCGCGCAGGTCACGCTCAGTTAT
TAATCAATCAGGAATCCGTG

Downstream 100 bases:

>100_bases
TCCGCATCACGACACAAGCGACAATGTCGCGACGGGGAAATGCCTTGAAGCGGTACAACGATGACAGAACGAGCGGACTG
CCGCGGCGGCGCGCGGCGGC

Product: putative fimbriae-assembly chaperone

Products: NA

Alternate protein names: Type 1 Pili Usher Pathway Chaperone CsuC; Fimbrial Chaperone; P Pilus Assembly Protein Chaperone PapD-Like Protein; Pili Assembly Chaperone Transmembrane Protein; P Pilus Assembly Protein Chaperone PapD-Like; CsuC Protein; Chaperone Protein; Chaperone Protein EcpD; Pilus Assembly Protein Chaperone PapD; Fimbrial Chaperone Protein; Exported Fimbriae-Related Chaperone; Pilus Assembly Protein; CsuC Protein Fimbrial Chaperone Proteins; Putataive Fimbrial Chaperone Protein; Type I Pili; Fimbrial Assembly Chaperone; Pili Assembly Chaperone Transmembrane Protein Papd-Like; Fimbriae-Assembly Chaperone; Type 1 Pilus Chaperone FimC; Fimbriae Chaperone; Chaperone Protein MrkB; Type 1 Pili Usher Pathway Chaperone; Type I Pilus Usher Pathway Chaperone CsuC; P Pilus Assembly Protein Chaperone PapD

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKVSRSPGAPARAARALRCALLGAAAAAPFVAQHAHAAASVMIWPIDPVIESGDRAAALWLENRDRRPVTLQVRVLGWRE
ANGEDVYDEDQPRVAGSPPMATVEPGKRQLIRLTRLADTAPGTEQAYRVLIDEIPQPDDDAQPAASGTSLGVKFQMHYSV
PLFVYGDGLWTKEHPDRRRDPATAGRPALRWRVEHDGGKRWLVVSNRGPVHARITHAAFEASGARADFARGLLGYVLPGA
RMRWALPETLKLHSNSKLIATVNGVADLAIDVDGAASNR

Sequences:

>Translated_279_residues
MKVSRSPGAPARAARALRCALLGAAAAAPFVAQHAHAAASVMIWPIDPVIESGDRAAALWLENRDRRPVTLQVRVLGWRE
ANGEDVYDEDQPRVAGSPPMATVEPGKRQLIRLTRLADTAPGTEQAYRVLIDEIPQPDDDAQPAASGTSLGVKFQMHYSV
PLFVYGDGLWTKEHPDRRRDPATAGRPALRWRVEHDGGKRWLVVSNRGPVHARITHAAFEASGARADFARGLLGYVLPGA
RMRWALPETLKLHSNSKLIATVNGVADLAIDVDGAASNR
>Mature_279_residues
MKVSRSPGAPARAARALRCALLGAAAAAPFVAQHAHAAASVMIWPIDPVIESGDRAAALWLENRDRRPVTLQVRVLGWRE
ANGEDVYDEDQPRVAGSPPMATVEPGKRQLIRLTRLADTAPGTEQAYRVLIDEIPQPDDDAQPAASGTSLGVKFQMHYSV
PLFVYGDGLWTKEHPDRRRDPATAGRPALRWRVEHDGGKRWLVVSNRGPVHARITHAAFEASGARADFARGLLGYVLPGA
RMRWALPETLKLHSNSKLIATVNGVADLAIDVDGAASNR

Specific function: Probably Mediates Assembly Of A Pilin. [C]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30255; Mature: 30255

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSRSPGAPARAARALRCALLGAAAAAPFVAQHAHAAASVMIWPIDPVIESGDRAAALW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCHHHHCCCCEEEEE
LENRDRRPVTLQVRVLGWREANGEDVYDEDQPRVAGSPPMATVEPGKRQLIRLTRLADTA
EECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCC
PGTEQAYRVLIDEIPQPDDDAQPAASGTSLGVKFQMHYSVPLFVYGDGLWTKEHPDRRRD
CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCC
PATAGRPALRWRVEHDGGKRWLVVSNRGPVHARITHAAFEASGARADFARGLLGYVLPGA
CCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHCCCC
RMRWALPETLKLHSNSKLIATVNGVADLAIDVDGAASNR
CEEECCCHHEEECCCCEEEEEECCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKVSRSPGAPARAARALRCALLGAAAAAPFVAQHAHAAASVMIWPIDPVIESGDRAAALW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCHHHHCCCCEEEEE
LENRDRRPVTLQVRVLGWREANGEDVYDEDQPRVAGSPPMATVEPGKRQLIRLTRLADTA
EECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCC
PGTEQAYRVLIDEIPQPDDDAQPAASGTSLGVKFQMHYSVPLFVYGDGLWTKEHPDRRRD
CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCC
PATAGRPALRWRVEHDGGKRWLVVSNRGPVHARITHAAFEASGARADFARGLLGYVLPGA
CCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHCCCC
RMRWALPETLKLHSNSKLIATVNGVADLAIDVDGAASNR
CEEECCCHHEEECCCCEEEEEECCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA